Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 AL135786.1-201ENST00000415892 214 ntBASIC1.84□□□□□ -2.11
MT-ND1P03886 AL590556.1-201ENST00000423231 483 ntBASIC1.84□□□□□ -2.11
MT-ND1P03886 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.84□□□□□ -2.11
MT-ND1P03886 RPL30P10-201ENST00000488148 337 ntBASIC1.84□□□□□ -2.11
MT-ND1P03886 Y_RNA.718-201ENST00000517110 102 ntBASIC1.84□□□□□ -2.11
MT-ND1P03886 IGKV3-31-201ENST00000523109 329 ntBASIC1.84□□□□□ -2.11
MT-ND1P03886 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.84□□□□□ -2.11
MT-ND1P03886 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.84□□□□□ -2.11
MT-ND1P03886 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.84□□□□□ -2.11
MT-ND1P03886 AL773524.1-201ENST00000614065 229 ntBASIC1.84□□□□□ -2.11
MT-ND1P03886 AC005296.1-201ENST00000616145 209 ntBASIC1.84□□□□□ -2.11
MT-ND1P03886 MIR1248-201ENST00000629190 106 ntBASIC1.84□□□□□ -2.11
MT-ND1P03886 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
MT-ND1P03886 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
MT-ND1P03886 ZNF299P-201ENST00000406845 1804 ntBASIC1.83□□□□□ -2.12
MT-ND1P03886 RNU4-82P-201ENST00000362443 140 ntBASIC1.83□□□□□ -2.12
MT-ND1P03886 SNORD14D-201ENST00000384390 87 ntBASIC1.83□□□□□ -2.12
MT-ND1P03886 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.83□□□□□ -2.12
MT-ND1P03886 USMG5P1-201ENST00000425964 177 ntBASIC1.83□□□□□ -2.12
MT-ND1P03886 MTCO3P29-201ENST00000432119 779 ntBASIC1.83□□□□□ -2.12
MT-ND1P03886 DEFB131C-201ENST00000528817 165 ntBASIC1.83□□□□□ -2.12
MT-ND1P03886 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC1.83□□□□□ -2.12
MT-ND1P03886 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.83□□□□□ -2.12
MT-ND1P03886 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.83□□□□□ -2.12
MT-ND1P03886 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.83□□□□□ -2.12
MT-ND1P03886 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.83□□□□□ -2.12
MT-ND1P03886 PISRT1.1-201ENST00000616930 107 ntBASIC1.83□□□□□ -2.12
MT-ND1P03886 AL359697.1-201ENST00000624879 587 ntBASIC1.83□□□□□ -2.12
MT-ND1P03886 SCARNA4-201ENST00000629045 128 ntBASIC1.83□□□□□ -2.12
MT-ND1P03886 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
MT-ND1P03886 IGHVIII-44-202ENST00000636235 289 ntBASIC1.83□□□□□ -2.12
MT-ND1P03886 RNU4-79P-201ENST00000362764 141 ntBASIC1.82□□□□□ -2.12
MT-ND1P03886 SNORA67.3-201ENST00000384366 140 ntBASIC1.82□□□□□ -2.12
MT-ND1P03886 RNU6-1297P-201ENST00000384415 104 ntBASIC1.82□□□□□ -2.12
MT-ND1P03886 Y_RNA.509-201ENST00000384506 99 ntBASIC1.82□□□□□ -2.12
MT-ND1P03886 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
MT-ND1P03886 RNU6-1093P-201ENST00000391194 107 ntBASIC1.82□□□□□ -2.12
MT-ND1P03886 MIR208B-201ENST00000401172 77 ntBASIC1.82□□□□□ -2.12
MT-ND1P03886 MIR1262-201ENST00000408276 93 ntBASIC1.82□□□□□ -2.12
MT-ND1P03886 AF228730.4-201ENST00000421457 183 ntBASIC1.82□□□□□ -2.12
MT-ND1P03886 HMGN2P19-201ENST00000425149 265 ntBASIC1.82□□□□□ -2.12
MT-ND1P03886 CBX3P6-201ENST00000430257 527 ntBASIC1.82□□□□□ -2.12
MT-ND1P03886 AL353997.1-201ENST00000432936 108 ntBASIC1.82□□□□□ -2.12
MT-ND1P03886 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.82□□□□□ -2.12
MT-ND1P03886 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.82□□□□□ -2.12
MT-ND1P03886 AC097473.1-201ENST00000508142 408 ntBASIC1.82□□□□□ -2.12
MT-ND1P03886 HSPE1P18-201ENST00000517602 280 ntBASIC1.82□□□□□ -2.12
MT-ND1P03886 AP000889.1-201ENST00000530968 660 ntBASIC1.82□□□□□ -2.12
MT-ND1P03886 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.82□□□□□ -2.12
MT-ND1P03886 EIF4A1P12-201ENST00000551910 141 ntBASIC1.82□□□□□ -2.12
MT-ND1P03886 MIR1273D-201ENST00000577266 86 ntBASIC1.82□□□□□ -2.12
MT-ND1P03886 MIR5701-3-201ENST00000578890 82 ntBASIC1.82□□□□□ -2.12
MT-ND1P03886 MIR5701-1-201ENST00000585138 82 ntBASIC1.82□□□□□ -2.12
MT-ND1P03886 AC016727.2-201ENST00000603988 621 ntBASIC1.82□□□□□ -2.12
MT-ND1P03886 AC084781.2-201ENST00000615568 161 ntBASIC1.82□□□□□ -2.12
MT-ND1P03886 MIR5701-2-201ENST00000615634 82 ntBASIC1.82□□□□□ -2.12
MT-ND1P03886 SCARNA15.3-201ENST00000626315 122 ntBASIC1.82□□□□□ -2.12
MT-ND1P03886 SCARNA4.1-201ENST00000628597 123 ntBASIC1.82□□□□□ -2.12
MT-ND1P03886 MIR219B-201ENST00000637023 88 ntBASIC1.82□□□□□ -2.12
MT-ND1P03886 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.82□□□□□ -2.12
MT-ND1P03886 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.81□□□□□ -2.12
MT-ND1P03886 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
MT-ND1P03886 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
MT-ND1P03886 RNU6-874P-201ENST00000362390 105 ntBASIC1.81□□□□□ -2.12
MT-ND1P03886 RNU4-56P-201ENST00000364700 142 ntBASIC1.81□□□□□ -2.12
MT-ND1P03886 RNU4-9P-201ENST00000364951 139 ntBASIC1.81□□□□□ -2.12
MT-ND1P03886 Y_RNA.384-201ENST00000383909 102 ntBASIC1.81□□□□□ -2.12
MT-ND1P03886 Y_RNA.405-201ENST00000383979 100 ntBASIC1.81□□□□□ -2.12
MT-ND1P03886 RNU6-890P-201ENST00000384121 107 ntBASIC1.81□□□□□ -2.12
MT-ND1P03886 Y_RNA.451-201ENST00000384200 100 ntBASIC1.81□□□□□ -2.12
MT-ND1P03886 Y_RNA.524-201ENST00000384564 100 ntBASIC1.81□□□□□ -2.12
MT-ND1P03886 Y_RNA.561-201ENST00000384694 100 ntBASIC1.81□□□□□ -2.12
MT-ND1P03886 MIR32-201ENST00000384965 70 ntBASIC1.81□□□□□ -2.12
MT-ND1P03886 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
MT-ND1P03886 RNY4P36-201ENST00000391116 96 ntBASIC1.81□□□□□ -2.12
MT-ND1P03886 RPS26P42-201ENST00000413485 326 ntBASIC1.81□□□□□ -2.12
MT-ND1P03886 AC244636.1-201ENST00000421152 228 ntBASIC1.81□□□□□ -2.12
MT-ND1P03886 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.81□□□□□ -2.12
MT-ND1P03886 OR2AQ1P-201ENST00000451972 200 ntBASIC1.81□□□□□ -2.12
MT-ND1P03886 RPL30P15-201ENST00000457129 321 ntBASIC1.81□□□□□ -2.12
MT-ND1P03886 snoU13.30-201ENST00000458951 104 ntBASIC1.81□□□□□ -2.12
MT-ND1P03886 SNORD19B-201ENST00000459623 84 ntBASIC1.81□□□□□ -2.12
MT-ND1P03886 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.81□□□□□ -2.12
MT-ND1P03886 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.81□□□□□ -2.12
MT-ND1P03886 RNU6-567P-201ENST00000516746 107 ntBASIC1.81□□□□□ -2.12
MT-ND1P03886 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.81□□□□□ -2.12
MT-ND1P03886 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.81□□□□□ -2.12
MT-ND1P03886 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.81□□□□□ -2.12
MT-ND1P03886 MIR5690-201ENST00000583739 73 ntBASIC1.81□□□□□ -2.12
MT-ND1P03886 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
MT-ND1P03886 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.81□□□□□ -2.12
MT-ND1P03886 AC104985.2-201ENST00000620598 500 ntBASIC1.81□□□□□ -2.12
MT-ND1P03886 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
MT-ND1P03886 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.81□□□□□ -2.12
MT-ND1P03886 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
MT-ND1P03886 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.8□□□□□ -2.12
MT-ND1P03886 CENPCP1-201ENST00000533085 2578 ntBASIC1.8□□□□□ -2.12
MT-ND1P03886 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
MT-ND1P03886 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
MT-ND1P03886 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms