Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 AL445685.2-201ENST00000422551 342 ntBASIC2.24□□□□□ -2.05
COL2A1P02458 AC007919.1-201ENST00000429380 217 ntBASIC2.24□□□□□ -2.05
COL2A1P02458 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.24□□□□□ -2.05
COL2A1P02458 RPL23AP7-203ENST00000449021 469 ntBASIC2.24□□□□□ -2.05
COL2A1P02458 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.24□□□□□ -2.05
COL2A1P02458 AC010469.2-201ENST00000496412 480 ntBASIC2.24□□□□□ -2.05
COL2A1P02458 AC078918.1-201ENST00000498515 228 ntBASIC2.24□□□□□ -2.05
COL2A1P02458 MIR892C-201ENST00000516410 77 ntBASIC2.24□□□□□ -2.05
COL2A1P02458 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
COL2A1P02458 AC144568.1-201ENST00000520139 137 ntBASIC2.24□□□□□ -2.05
COL2A1P02458 SMILR-201ENST00000533992 553 ntTSL 4 BASIC2.24□□□□□ -2.05
COL2A1P02458 RRN3P3-201ENST00000549207 578 ntBASIC2.24□□□□□ -2.05
COL2A1P02458 CPDP1-201ENST00000579660 283 ntBASIC2.24□□□□□ -2.05
COL2A1P02458 AC002545.1-201ENST00000592511 181 ntBASIC2.24□□□□□ -2.05
COL2A1P02458 RNA5SP108-201ENST00000605921 117 ntBASIC2.24□□□□□ -2.05
COL2A1P02458 AC011476.5-201ENST00000615594 130 ntBASIC2.24□□□□□ -2.05
COL2A1P02458 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC2.24□□□□□ -2.05
COL2A1P02458 AL137003.2-201ENST00000606924 2538 ntBASIC2.23□□□□□ -2.05
COL2A1P02458 Z82195.2-201ENST00000612348 18351 ntBASIC2.23□□□□□ -2.05
COL2A1P02458 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
COL2A1P02458 Y_RNA.84-201ENST00000363011 104 ntBASIC2.23□□□□□ -2.05
COL2A1P02458 RNU6-817P-201ENST00000391083 104 ntBASIC2.23□□□□□ -2.05
COL2A1P02458 RNU6-493P-201ENST00000391321 108 ntBASIC2.23□□□□□ -2.05
COL2A1P02458 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.23□□□□□ -2.05
COL2A1P02458 AL021397.1-201ENST00000451806 248 ntBASIC2.23□□□□□ -2.05
COL2A1P02458 RNU6-1037P-201ENST00000459571 107 ntBASIC2.23□□□□□ -2.05
COL2A1P02458 RPS29P11-201ENST00000496507 171 ntBASIC2.23□□□□□ -2.05
COL2A1P02458 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.23□□□□□ -2.05
COL2A1P02458 AC107393.1-201ENST00000512403 346 ntBASIC2.23□□□□□ -2.05
COL2A1P02458 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.23□□□□□ -2.05
COL2A1P02458 AC025755.1-201ENST00000521306 278 ntBASIC2.23□□□□□ -2.05
COL2A1P02458 SYF2P1-201ENST00000550658 413 ntBASIC2.23□□□□□ -2.05
COL2A1P02458 DNAJC19P9-201ENST00000555084 351 ntBASIC2.23□□□□□ -2.05
COL2A1P02458 AL137100.2-201ENST00000555786 315 ntBASIC2.23□□□□□ -2.05
COL2A1P02458 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.23□□□□□ -2.05
COL2A1P02458 AC023824.2-201ENST00000566185 400 ntBASIC2.23□□□□□ -2.05
COL2A1P02458 AC130289.1-201ENST00000577321 73 ntBASIC2.23□□□□□ -2.05
COL2A1P02458 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC2.23□□□□□ -2.05
COL2A1P02458 FAM60BP-201ENST00000578364 658 ntBASIC2.23□□□□□ -2.05
COL2A1P02458 RPL23AP78-201ENST00000599928 470 ntBASIC2.23□□□□□ -2.05
COL2A1P02458 AL133393.1-201ENST00000603277 287 ntBASIC2.23□□□□□ -2.05
COL2A1P02458 SNRPGP19-201ENST00000603826 189 ntBASIC2.23□□□□□ -2.05
COL2A1P02458 AL355810.1-201ENST00000614629 552 ntBASIC2.23□□□□□ -2.05
COL2A1P02458 AC034102.8-201ENST00000615146 484 ntBASIC2.23□□□□□ -2.05
COL2A1P02458 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC2.23□□□□□ -2.05
COL2A1P02458 AL353748.2-201ENST00000622148 471 ntBASIC2.23□□□□□ -2.05
COL2A1P02458 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.23□□□□□ -2.05
COL2A1P02458 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.23□□□□□ -2.05
COL2A1P02458 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.23□□□□□ -2.05
COL2A1P02458 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
COL2A1P02458 Z75746.1-201ENST00000440243 2080 ntBASIC2.23□□□□□ -2.05
COL2A1P02458 snoU2_19.2-201ENST00000363024 80 ntBASIC2.22□□□□□ -2.05
COL2A1P02458 RNU6-1167P-201ENST00000363227 94 ntBASIC2.22□□□□□ -2.05
COL2A1P02458 Y_RNA.274-201ENST00000364714 101 ntBASIC2.22□□□□□ -2.05
COL2A1P02458 RNA5SP37-201ENST00000365420 130 ntBASIC2.22□□□□□ -2.05
COL2A1P02458 Y_RNA.458-201ENST00000384240 102 ntBASIC2.22□□□□□ -2.05
COL2A1P02458 RPL21P75-201ENST00000396599 483 ntBASIC2.22□□□□□ -2.05
COL2A1P02458 RPL21P28-201ENST00000401418 483 ntBASIC2.22□□□□□ -2.05
COL2A1P02458 AL603910.2-201ENST00000407268 136 ntBASIC2.22□□□□□ -2.05
COL2A1P02458 Y_RNA.602-201ENST00000410535 92 ntBASIC2.22□□□□□ -2.05
COL2A1P02458 RNU2-25P-201ENST00000411041 191 ntBASIC2.22□□□□□ -2.05
COL2A1P02458 MTATP6P4-201ENST00000427725 675 ntBASIC2.22□□□□□ -2.05
COL2A1P02458 RPEP5-201ENST00000441137 268 ntBASIC2.22□□□□□ -2.05
COL2A1P02458 snoU13.3-201ENST00000459441 104 ntBASIC2.22□□□□□ -2.05
COL2A1P02458 RPL21P16-201ENST00000495531 483 ntBASIC2.22□□□□□ -2.05
COL2A1P02458 RNU7-4P-201ENST00000516961 62 ntBASIC2.22□□□□□ -2.05
COL2A1P02458 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.22□□□□□ -2.05
COL2A1P02458 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.22□□□□□ -2.05
COL2A1P02458 MIR4643-201ENST00000577473 78 ntBASIC2.22□□□□□ -2.05
COL2A1P02458 MIR1273C-201ENST00000578669 77 ntBASIC2.22□□□□□ -2.05
COL2A1P02458 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.22□□□□□ -2.05
COL2A1P02458 AL390123.1-201ENST00000603216 237 ntBASIC2.22□□□□□ -2.05
COL2A1P02458 AL355877.2-201ENST00000603670 358 ntBASIC2.22□□□□□ -2.05
COL2A1P02458 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.22□□□□□ -2.05
COL2A1P02458 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.22□□□□□ -2.05
COL2A1P02458 AP001282.2-201ENST00000616149 309 ntBASIC2.22□□□□□ -2.05
COL2A1P02458 AL360181.4-201ENST00000621752 134 ntBASIC2.22□□□□□ -2.05
COL2A1P02458 AC009812.4-201ENST00000569134 1805 ntBASIC2.22□□□□□ -2.05
COL2A1P02458 AC135776.4-201ENST00000624300 1904 ntBASIC2.22□□□□□ -2.05
COL2A1P02458 Y_RNA.33-201ENST00000362591 102 ntBASIC2.21□□□□□ -2.06
COL2A1P02458 SNORD50.1-201ENST00000362987 71 ntBASIC2.21□□□□□ -2.06
COL2A1P02458 RNU4-50P-201ENST00000364361 141 ntBASIC2.21□□□□□ -2.06
COL2A1P02458 RNA5SP160-201ENST00000364866 120 ntBASIC2.21□□□□□ -2.06
COL2A1P02458 Y_RNA.405-201ENST00000383979 100 ntBASIC2.21□□□□□ -2.06
COL2A1P02458 RNU6-926P-201ENST00000384075 107 ntBASIC2.21□□□□□ -2.06
COL2A1P02458 RNU6-187P-201ENST00000384139 106 ntBASIC2.21□□□□□ -2.06
COL2A1P02458 Y_RNA.451-201ENST00000384200 100 ntBASIC2.21□□□□□ -2.06
COL2A1P02458 Y_RNA.524-201ENST00000384564 100 ntBASIC2.21□□□□□ -2.06
COL2A1P02458 Y_RNA.561-201ENST00000384694 100 ntBASIC2.21□□□□□ -2.06
COL2A1P02458 RNU6-700P-201ENST00000391043 107 ntBASIC2.21□□□□□ -2.06
COL2A1P02458 SNORA40.18-201ENST00000391200 128 ntBASIC2.21□□□□□ -2.06
COL2A1P02458 Y_RNA.592-201ENST00000410274 109 ntBASIC2.21□□□□□ -2.06
COL2A1P02458 HMGN2P35-201ENST00000412164 270 ntBASIC2.21□□□□□ -2.06
COL2A1P02458 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.21□□□□□ -2.06
COL2A1P02458 SNORD56-201ENST00000413522 71 ntBASIC2.21□□□□□ -2.06
COL2A1P02458 TOMM22P1-201ENST00000418578 312 ntBASIC2.21□□□□□ -2.06
COL2A1P02458 AC007098.1-201ENST00000420122 367 ntBASIC2.21□□□□□ -2.06
COL2A1P02458 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.21□□□□□ -2.06
COL2A1P02458 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.21□□□□□ -2.06
COL2A1P02458 RPL31P60-201ENST00000478450 367 ntBASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 144.5 ms