Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 RNU6-933P-201ENST00000384424 107 ntBASIC2.42□□□□□ -2.02
LDLRP01130 MT-TW-201ENST00000387382 68 ntBASIC2.42□□□□□ -2.02
LDLRP01130 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.42□□□□□ -2.02
LDLRP01130 RNU6ATAC23P-201ENST00000408448 123 ntBASIC2.42□□□□□ -2.02
LDLRP01130 AC009963.1-201ENST00000417265 157 ntBASIC2.42□□□□□ -2.02
LDLRP01130 ELOCP20-201ENST00000422460 345 ntBASIC2.42□□□□□ -2.02
LDLRP01130 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.42□□□□□ -2.02
LDLRP01130 RPL30P4-201ENST00000429309 333 ntBASIC2.42□□□□□ -2.02
LDLRP01130 DAP3P1-201ENST00000441522 278 ntBASIC2.42□□□□□ -2.02
LDLRP01130 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.42□□□□□ -2.02
LDLRP01130 SCARNA3-201ENST00000517097 143 ntBASIC2.42□□□□□ -2.02
LDLRP01130 AC023157.2-201ENST00000540596 141 ntBASIC2.42□□□□□ -2.02
LDLRP01130 AC079598.5-201ENST00000547460 117 ntBASIC2.42□□□□□ -2.02
LDLRP01130 AC015712.3-201ENST00000559380 164 ntBASIC2.42□□□□□ -2.02
LDLRP01130 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.42□□□□□ -2.02
LDLRP01130 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.42□□□□□ -2.02
LDLRP01130 Z98751.3-201ENST00000604447 521 ntBASIC2.42□□□□□ -2.02
LDLRP01130 HMGB1P24-202ENST00000615653 685 ntBASIC2.42□□□□□ -2.02
LDLRP01130 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
LDLRP01130 RNU6-874P-201ENST00000362390 105 ntBASIC2.41□□□□□ -2.02
LDLRP01130 RNY1P16-201ENST00000363063 111 ntBASIC2.41□□□□□ -2.02
LDLRP01130 RNU6-486P-201ENST00000363116 107 ntBASIC2.41□□□□□ -2.02
LDLRP01130 Y_RNA.257-201ENST00000364596 102 ntBASIC2.41□□□□□ -2.02
LDLRP01130 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.41□□□□□ -2.02
LDLRP01130 Y_RNA.447-201ENST00000384184 113 ntBASIC2.41□□□□□ -2.02
LDLRP01130 Y_RNA.533-201ENST00000384596 114 ntBASIC2.41□□□□□ -2.02
LDLRP01130 MIR521-1-201ENST00000384902 87 ntBASIC2.41□□□□□ -2.02
LDLRP01130 RNU6-482P-201ENST00000391068 107 ntBASIC2.41□□□□□ -2.02
LDLRP01130 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
LDLRP01130 RNU6-847P-201ENST00000411115 108 ntBASIC2.41□□□□□ -2.02
LDLRP01130 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.41□□□□□ -2.02
LDLRP01130 Z98742.3-201ENST00000418637 326 ntBASIC2.41□□□□□ -2.02
LDLRP01130 AC073910.1-201ENST00000445047 438 ntBASIC2.41□□□□□ -2.02
LDLRP01130 AL031659.1-201ENST00000447075 539 ntBASIC2.41□□□□□ -2.02
LDLRP01130 U8.21-201ENST00000459536 136 ntBASIC2.41□□□□□ -2.02
LDLRP01130 AC073901.1-201ENST00000462471 408 ntBASIC2.41□□□□□ -2.02
LDLRP01130 AC140059.1-201ENST00000489238 361 ntBASIC2.41□□□□□ -2.02
LDLRP01130 AC108210.2-201ENST00000503681 201 ntBASIC2.41□□□□□ -2.02
LDLRP01130 SNORA40.14-201ENST00000516543 86 ntBASIC2.41□□□□□ -2.02
LDLRP01130 AC040926.1-201ENST00000530195 238 ntBASIC2.41□□□□□ -2.02
LDLRP01130 AC125232.2-201ENST00000592457 143 ntBASIC2.41□□□□□ -2.02
LDLRP01130 AL109918.3-201ENST00000603072 338 ntBASIC2.41□□□□□ -2.02
LDLRP01130 AC073410.2-201ENST00000603240 332 ntBASIC2.41□□□□□ -2.02
LDLRP01130 AC016727.2-201ENST00000603988 621 ntBASIC2.41□□□□□ -2.02
LDLRP01130 RAC1P9-201ENST00000604990 392 ntBASIC2.41□□□□□ -2.02
LDLRP01130 AC100812.1-201ENST00000607622 580 ntBASIC2.41□□□□□ -2.02
LDLRP01130 AC078938.1-201ENST00000620993 318 ntBASIC2.41□□□□□ -2.02
LDLRP01130 AC010329.5-201ENST00000623497 2174 ntBASIC2.41□□□□□ -2.02
LDLRP01130 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
LDLRP01130 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.41□□□□□ -2.02
LDLRP01130 Z82209.1-201ENST00000422141 2135 ntBASIC2.41□□□□□ -2.02
LDLRP01130 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.4□□□□□ -2.02
LDLRP01130 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
LDLRP01130 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
LDLRP01130 Y_RNA.40-201ENST00000362645 93 ntBASIC2.4□□□□□ -2.03
LDLRP01130 RNU6-1010P-201ENST00000362757 107 ntBASIC2.4□□□□□ -2.03
LDLRP01130 Y_RNA.483-201ENST00000384380 101 ntBASIC2.4□□□□□ -2.03
LDLRP01130 MIR186-201ENST00000384988 86 ntBASIC2.4□□□□□ -2.03
LDLRP01130 MIR764-201ENST00000390811 85 ntBASIC2.4□□□□□ -2.03
LDLRP01130 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.4□□□□□ -2.03
LDLRP01130 OR2AQ1P-201ENST00000451972 200 ntBASIC2.4□□□□□ -2.03
LDLRP01130 AC023141.11-201ENST00000508864 202 ntBASIC2.4□□□□□ -2.03
LDLRP01130 HMGB3P3-201ENST00000510526 400 ntBASIC2.4□□□□□ -2.03
LDLRP01130 RNU6-1143P-201ENST00000516125 104 ntBASIC2.4□□□□□ -2.03
LDLRP01130 RNU6-991P-201ENST00000516168 107 ntBASIC2.4□□□□□ -2.03
LDLRP01130 RNY3P15-201ENST00000516297 97 ntBASIC2.4□□□□□ -2.03
LDLRP01130 Y_RNA.673-201ENST00000516306 88 ntBASIC2.4□□□□□ -2.03
LDLRP01130 RNA5SP282-201ENST00000516355 108 ntBASIC2.4□□□□□ -2.03
LDLRP01130 AP005902.1-201ENST00000521358 186 ntBASIC2.4□□□□□ -2.03
LDLRP01130 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.4□□□□□ -2.03
LDLRP01130 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.4□□□□□ -2.03
LDLRP01130 MIR5701-3-201ENST00000578890 82 ntBASIC2.4□□□□□ -2.03
LDLRP01130 MIR4273-201ENST00000582824 84 ntBASIC2.4□□□□□ -2.03
LDLRP01130 MIR5701-1-201ENST00000585138 82 ntBASIC2.4□□□□□ -2.03
LDLRP01130 MIR1244-1-201ENST00000612829 85 ntBASIC2.4□□□□□ -2.03
LDLRP01130 MIR5701-2-201ENST00000615634 82 ntBASIC2.4□□□□□ -2.03
LDLRP01130 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.4□□□□□ -2.03
LDLRP01130 MIR1244-3-201ENST00000635744 85 ntBASIC2.4□□□□□ -2.03
LDLRP01130 MIR1244-2-201ENST00000636449 85 ntBASIC2.4□□□□□ -2.03
LDLRP01130 MIR1244-4-202ENST00000636813 85 ntBASIC2.4□□□□□ -2.03
LDLRP01130 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.4□□□□□ -2.03
LDLRP01130 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.39□□□□□ -2.03
LDLRP01130 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
LDLRP01130 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.39□□□□□ -2.03
LDLRP01130 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
LDLRP01130 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
LDLRP01130 Y_RNA.64-201ENST00000362845 102 ntBASIC2.39□□□□□ -2.03
LDLRP01130 Y_RNA.376-201ENST00000365638 108 ntBASIC2.39□□□□□ -2.03
LDLRP01130 RNU1-52P-201ENST00000384190 164 ntBASIC2.39□□□□□ -2.03
LDLRP01130 RNU1-57P-201ENST00000384491 166 ntBASIC2.39□□□□□ -2.03
LDLRP01130 BTF3L4P2-201ENST00000392798 346 ntBASIC2.39□□□□□ -2.03
LDLRP01130 RNA5SP425-201ENST00000410336 112 ntBASIC2.39□□□□□ -2.03
LDLRP01130 RNU4-53P-201ENST00000410828 140 ntBASIC2.39□□□□□ -2.03
LDLRP01130 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.39□□□□□ -2.03
LDLRP01130 AL591806.2-201ENST00000433122 173 ntBASIC2.39□□□□□ -2.03
LDLRP01130 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.39□□□□□ -2.03
LDLRP01130 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.39□□□□□ -2.03
LDLRP01130 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.39□□□□□ -2.03
LDLRP01130 SNORD127-201ENST00000458892 86 ntBASIC2.39□□□□□ -2.03
LDLRP01130 RNU7-169P-201ENST00000459456 61 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms