Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 SNORA59B-202ENST00000578183 701 ntBASIC0.03□□□□□ -2.4
ABCA1O95477 AC022217.4-201ENST00000604389 163 ntBASIC0.03□□□□□ -2.4
ABCA1O95477 RMST_7.1-201ENST00000621935 268 ntBASIC0.03□□□□□ -2.4
ABCA1O95477 AL078595.3-201ENST00000623815 1166 ntBASIC0.03□□□□□ -2.4
ABCA1O95477 AL603839.4-201ENST00000624658 1005 ntBASIC0.03□□□□□ -2.4
ABCA1O95477 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.03□□□□□ -2.4
ABCA1O95477 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.03□□□□□ -2.41
ABCA1O95477 AL355796.1-201ENST00000406706 323 ntBASIC0.02□□□□□ -2.41
ABCA1O95477 ELOCP17-201ENST00000414751 326 ntBASIC0.02□□□□□ -2.41
ABCA1O95477 AC244098.3-201ENST00000424803 96 ntBASIC0.02□□□□□ -2.41
ABCA1O95477 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.02□□□□□ -2.41
ABCA1O95477 MTND5P2-201ENST00000442927 1142 ntBASIC0.02□□□□□ -2.41
ABCA1O95477 AC073910.1-201ENST00000445047 438 ntBASIC0.02□□□□□ -2.41
ABCA1O95477 AC022447.4-201ENST00000504053 364 ntBASIC0.02□□□□□ -2.41
ABCA1O95477 RNU7-51P-201ENST00000516560 62 ntBASIC0.02□□□□□ -2.41
ABCA1O95477 RNU6-856P-201ENST00000516959 98 ntBASIC0.02□□□□□ -2.41
ABCA1O95477 AL606834.3-201ENST00000602615 496 ntBASIC0.02□□□□□ -2.41
ABCA1O95477 Z99497.2-201ENST00000603634 310 ntBASIC0.02□□□□□ -2.41
ABCA1O95477 Z98751.3-201ENST00000604447 521 ntBASIC0.02□□□□□ -2.41
ABCA1O95477 AC144521.1-201ENST00000607148 956 ntBASIC0.02□□□□□ -2.41
ABCA1O95477 AL451064.1-201ENST00000607718 471 ntBASIC0.02□□□□□ -2.41
ABCA1O95477 AC104458.1-201ENST00000608243 463 ntBASIC0.02□□□□□ -2.41
ABCA1O95477 AL391903.3-201ENST00000612158 163 ntBASIC0.02□□□□□ -2.41
ABCA1O95477 AC007014.2-201ENST00000615581 479 ntBASIC0.02□□□□□ -2.41
ABCA1O95477 AP002782.1-201ENST00000623107 614 ntBASIC0.02□□□□□ -2.41
ABCA1O95477 AL359697.1-201ENST00000624879 587 ntBASIC0.02□□□□□ -2.41
ABCA1O95477 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.02□□□□□ -2.41
ABCA1O95477 RNA5SP214-201ENST00000363378 118 ntBASIC0.02□□□□□ -2.41
ABCA1O95477 RNU6-833P-201ENST00000363486 107 ntBASIC0.02□□□□□ -2.41
ABCA1O95477 RNU6-48P-201ENST00000384161 107 ntBASIC0.02□□□□□ -2.41
ABCA1O95477 AC078809.1-201ENST00000427601 140 ntBASIC0.02□□□□□ -2.41
ABCA1O95477 RPL23AP50-201ENST00000434149 455 ntBASIC0.02□□□□□ -2.41
ABCA1O95477 AL360271.2-201ENST00000447710 161 ntBASIC0.02□□□□□ -2.41
ABCA1O95477 AL139824.2-201ENST00000458731 1095 ntBASIC0.02□□□□□ -2.41
ABCA1O95477 snoU13.25-201ENST00000458945 104 ntBASIC0.02□□□□□ -2.41
ABCA1O95477 RNU7-94P-201ENST00000459576 63 ntBASIC0.02□□□□□ -2.41
ABCA1O95477 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.02□□□□□ -2.41
ABCA1O95477 RNU6-1041P-201ENST00000516254 102 ntBASIC0.02□□□□□ -2.41
ABCA1O95477 RNU2-10P-201ENST00000516375 211 ntBASIC0.02□□□□□ -2.41
ABCA1O95477 AC141557.1-201ENST00000540982 400 ntBASIC0.02□□□□□ -2.41
ABCA1O95477 AC087883.1-201ENST00000551882 391 ntBASIC0.02□□□□□ -2.41
ABCA1O95477 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC0.02□□□□□ -2.41
ABCA1O95477 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC0.02□□□□□ -2.41
ABCA1O95477 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC0.02□□□□□ -2.41
ABCA1O95477 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.02□□□□□ -2.41
ABCA1O95477 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC0.02□□□□□ -2.41
ABCA1O95477 AL390237.1-201ENST00000404226 1415 ntBASIC0.02□□□□□ -2.41
ABCA1O95477 RNU6-46P-201ENST00000383860 107 ntBASIC0.01□□□□□ -2.41
ABCA1O95477 RNY1P8-201ENST00000383970 114 ntBASIC0.01□□□□□ -2.41
ABCA1O95477 RPS24P1-201ENST00000438550 371 ntBASIC0.01□□□□□ -2.41
ABCA1O95477 AC016717.1-201ENST00000448918 286 ntBASIC0.01□□□□□ -2.41
ABCA1O95477 RNA5SP134-201ENST00000516492 96 ntBASIC0.01□□□□□ -2.41
ABCA1O95477 AC009712.1-201ENST00000564938 316 ntBASIC0.01□□□□□ -2.41
ABCA1O95477 MIR4753-201ENST00000585119 83 ntBASIC0.01□□□□□ -2.41
ABCA1O95477 AC004223.2-201ENST00000590309 544 ntBASIC0.01□□□□□ -2.41
ABCA1O95477 Z99289.3-201ENST00000605586 594 ntBASIC0.01□□□□□ -2.41
ABCA1O95477 AC009994.1-201ENST00000606889 253 ntBASIC0.01□□□□□ -2.41
ABCA1O95477 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC0.01□□□□□ -2.41
ABCA1O95477 AC073349.3-201ENST00000617616 186 ntBASIC0.01□□□□□ -2.41
ABCA1O95477 AC092634.7-201ENST00000621022 103 ntBASIC0.01□□□□□ -2.41
ABCA1O95477 AL356596.1-201ENST00000624230 379 ntBASIC0.01□□□□□ -2.41
ABCA1O95477 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC0.01□□□□□ -2.41
ABCA1O95477 RNU6-527P-201ENST00000363425 104 ntBASIC0.01□□□□□ -2.41
ABCA1O95477 U3.9-201ENST00000363823 204 ntBASIC0.01□□□□□ -2.41
ABCA1O95477 SNORD114-9-201ENST00000364370 72 ntBASIC0.01□□□□□ -2.41
ABCA1O95477 SNORA32.2-201ENST00000384049 122 ntBASIC0.01□□□□□ -2.41
ABCA1O95477 Y_RNA.488-201ENST00000384403 102 ntBASIC0.01□□□□□ -2.41
ABCA1O95477 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC0.01□□□□□ -2.41
ABCA1O95477 USP9YP11-201ENST00000427537 717 ntBASIC0.01□□□□□ -2.41
ABCA1O95477 AC002429.1-201ENST00000437672 148 ntBASIC0.01□□□□□ -2.41
ABCA1O95477 AL122001.1-201ENST00000457027 370 ntBASIC0.01□□□□□ -2.41
ABCA1O95477 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC0.01□□□□□ -2.41
ABCA1O95477 SNORA68.3-201ENST00000515906 83 ntBASIC0.01□□□□□ -2.41
ABCA1O95477 RNU6-863P-201ENST00000515989 104 ntBASIC0.01□□□□□ -2.41
ABCA1O95477 RNU6-751P-201ENST00000516382 101 ntBASIC0.01□□□□□ -2.41
ABCA1O95477 RNU6-1098P-201ENST00000516772 96 ntBASIC0.01□□□□□ -2.41
ABCA1O95477 SCARNA16.5-201ENST00000517114 183 ntBASIC0.01□□□□□ -2.41
ABCA1O95477 AC026616.1-201ENST00000523157 525 ntBASIC0.01□□□□□ -2.41
ABCA1O95477 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC0.01□□□□□ -2.41
ABCA1O95477 TPRKBP2-201ENST00000565969 475 ntBASIC0.01□□□□□ -2.41
ABCA1O95477 MTND3P13-201ENST00000574391 343 ntBASIC0.01□□□□□ -2.41
ABCA1O95477 DEFB131E-202ENST00000602581 683 ntBASIC0.01□□□□□ -2.41
ABCA1O95477 AC078795.3-201ENST00000602913 472 ntBASIC0.01□□□□□ -2.41
ABCA1O95477 PRELID3BP2-201ENST00000605362 201 ntBASIC0.01□□□□□ -2.41
ABCA1O95477 AC099785.1-201ENST00000605697 437 ntBASIC0.01□□□□□ -2.41
ABCA1O95477 AC245297.2-201ENST00000610119 565 ntBASIC0.01□□□□□ -2.41
ABCA1O95477 SNORA9.1-201ENST00000362412 131 ntBASIC0□□□□□ -2.41
ABCA1O95477 RNU6-199P-201ENST00000362954 107 ntBASIC0□□□□□ -2.41
ABCA1O95477 RNU5B-4P-201ENST00000363508 111 ntBASIC0□□□□□ -2.41
ABCA1O95477 RNU6-1184P-201ENST00000384588 108 ntBASIC0□□□□□ -2.41
ABCA1O95477 SNORA12.1-201ENST00000390873 148 ntBASIC0□□□□□ -2.41
ABCA1O95477 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC0□□□□□ -2.41
ABCA1O95477 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0□□□□□ -2.41
ABCA1O95477 AC104332.1-201ENST00000440471 797 ntBASIC0□□□□□ -2.41
ABCA1O95477 AL606517.2-201ENST00000442855 241 ntBASIC0□□□□□ -2.41
ABCA1O95477 AC093019.1-201ENST00000443135 252 ntBASIC0□□□□□ -2.41
ABCA1O95477 RNU6-1069P-201ENST00000516612 133 ntBASIC0□□□□□ -2.41
ABCA1O95477 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0□□□□□ -2.41
ABCA1O95477 AC110760.3-201ENST00000598794 467 ntBASIC0□□□□□ -2.41
ABCA1O95477 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC0□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms