Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 AC006600.1-201ENST00000572529 153 ntBASIC3.14□□□□□ -1.91
CLSTN1O94985 MIR3670-2-201ENST00000582974 65 ntBASIC3.14□□□□□ -1.91
CLSTN1O94985 MIR3670-1-201ENST00000584160 65 ntBASIC3.14□□□□□ -1.91
CLSTN1O94985 MIR3670-3-201ENST00000584855 65 ntBASIC3.14□□□□□ -1.91
CLSTN1O94985 RPL17P51-201ENST00000605218 238 ntBASIC3.14□□□□□ -1.91
CLSTN1O94985 MIR3670-4-201ENST00000612260 65 ntBASIC3.14□□□□□ -1.91
CLSTN1O94985 U2.1-201ENST00000618978 145 ntBASIC3.14□□□□□ -1.91
CLSTN1O94985 MIR4272-201ENST00000635924 64 ntBASIC3.14□□□□□ -1.91
CLSTN1O94985 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.13□□□□□ -1.91
CLSTN1O94985 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CLSTN1O94985 Y_RNA.179-201ENST00000363844 90 ntBASIC3.13□□□□□ -1.91
CLSTN1O94985 AL357139.1-201ENST00000407792 426 ntBASIC3.13□□□□□ -1.91
CLSTN1O94985 MIR1262-201ENST00000408276 93 ntBASIC3.13□□□□□ -1.91
CLSTN1O94985 MCFD2P1-201ENST00000417812 300 ntBASIC3.13□□□□□ -1.91
CLSTN1O94985 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC3.13□□□□□ -1.91
CLSTN1O94985 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC3.13□□□□□ -1.91
CLSTN1O94985 MTND4P19-201ENST00000446659 478 ntBASIC3.13□□□□□ -1.91
CLSTN1O94985 AC091179.3-201ENST00000474761 144 ntBASIC3.13□□□□□ -1.91
CLSTN1O94985 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC3.13□□□□□ -1.91
CLSTN1O94985 SNORD58B-201ENST00000607313 66 ntBASIC3.13□□□□□ -1.91
CLSTN1O94985 MIR6840-201ENST00000611937 71 ntBASIC3.13□□□□□ -1.91
CLSTN1O94985 AC006386.2-201ENST00000624491 75 ntBASIC3.13□□□□□ -1.91
CLSTN1O94985 AC012005.1-201ENST00000624575 75 ntBASIC3.13□□□□□ -1.91
CLSTN1O94985 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
CLSTN1O94985 RNU6-1301P-201ENST00000362724 104 ntBASIC3.12□□□□□ -1.91
CLSTN1O94985 SNORD115-3-201ENST00000363100 82 ntBASIC3.12□□□□□ -1.91
CLSTN1O94985 SNORD87-201ENST00000364849 89 ntBASIC3.12□□□□□ -1.91
CLSTN1O94985 SNORA9-201ENST00000384215 133 ntBASIC3.12□□□□□ -1.91
CLSTN1O94985 RNU6-318P-201ENST00000384283 103 ntBASIC3.12□□□□□ -1.91
CLSTN1O94985 MIR329-1-201ENST00000385028 80 ntBASIC3.12□□□□□ -1.91
CLSTN1O94985 RNA5SP210-201ENST00000391034 120 ntBASIC3.12□□□□□ -1.91
CLSTN1O94985 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.12□□□□□ -1.91
CLSTN1O94985 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC3.12□□□□□ -1.91
CLSTN1O94985 AL163540.1-201ENST00000485382 386 ntBASIC3.12□□□□□ -1.91
CLSTN1O94985 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.12□□□□□ -1.91
CLSTN1O94985 ELOCP31-201ENST00000540463 467 ntBASIC3.12□□□□□ -1.91
CLSTN1O94985 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.12□□□□□ -1.91
CLSTN1O94985 AC005000.2-201ENST00000605468 310 ntBASIC3.12□□□□□ -1.91
CLSTN1O94985 AGL-204ENST00000370161 6923 ntTSL 5 BASIC3.12□□□□□ -1.91
CLSTN1O94985 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
CLSTN1O94985 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CLSTN1O94985 AP006437.1-201ENST00000641440 3685 ntBASIC3.12□□□□□ -1.91
CLSTN1O94985 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CLSTN1O94985 AC091812.1-201ENST00000432235 1948 ntBASIC3.11□□□□□ -1.91
CLSTN1O94985 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
CLSTN1O94985 Y_RNA.39-201ENST00000362620 98 ntBASIC3.11□□□□□ -1.91
CLSTN1O94985 RNU6-1305P-201ENST00000364353 104 ntBASIC3.11□□□□□ -1.91
CLSTN1O94985 SNORD31B-201ENST00000364977 69 ntBASIC3.11□□□□□ -1.91
CLSTN1O94985 SNORA22B-201ENST00000383876 138 ntBASIC3.11□□□□□ -1.91
CLSTN1O94985 EDDM3CP-201ENST00000415977 425 ntBASIC3.11□□□□□ -1.91
CLSTN1O94985 AC005534.2-201ENST00000431047 433 ntBASIC3.11□□□□□ -1.91
CLSTN1O94985 MTCYBP6-201ENST00000441810 138 ntBASIC3.11□□□□□ -1.91
CLSTN1O94985 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC3.11□□□□□ -1.91
CLSTN1O94985 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC3.11□□□□□ -1.91
CLSTN1O94985 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC3.11□□□□□ -1.91
CLSTN1O94985 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.11□□□□□ -1.91
CLSTN1O94985 AC078899.2-201ENST00000595282 212 ntBASIC3.11□□□□□ -1.91
CLSTN1O94985 AL356055.1-201ENST00000602528 446 ntBASIC3.11□□□□□ -1.91
CLSTN1O94985 AL606534.2-204ENST00000635008 178 ntBASIC3.11□□□□□ -1.91
CLSTN1O94985 MTND5P35-201ENST00000557537 1720 ntBASIC3.1□□□□□ -1.91
CLSTN1O94985 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.1□□□□□ -1.91
CLSTN1O94985 Y_RNA.28-201ENST00000362554 111 ntBASIC3.1□□□□□ -1.91
CLSTN1O94985 RNU1-62P-201ENST00000362599 164 ntBASIC3.1□□□□□ -1.91
CLSTN1O94985 Y_RNA.148-201ENST00000363557 117 ntBASIC3.1□□□□□ -1.91
CLSTN1O94985 RNU1-115P-201ENST00000365329 160 ntBASIC3.1□□□□□ -1.91
CLSTN1O94985 RNU6-1227P-201ENST00000383981 107 ntBASIC3.1□□□□□ -1.91
CLSTN1O94985 Y_RNA.415-201ENST00000384012 112 ntBASIC3.1□□□□□ -1.91
CLSTN1O94985 RNU6-793P-201ENST00000384233 104 ntBASIC3.1□□□□□ -1.91
CLSTN1O94985 MIR512-1-201ENST00000384913 84 ntBASIC3.1□□□□□ -1.91
CLSTN1O94985 MIR628-201ENST00000385229 95 ntBASIC3.1□□□□□ -1.91
CLSTN1O94985 AC025750.2-201ENST00000442609 450 ntBASIC3.1□□□□□ -1.91
CLSTN1O94985 AL137159.1-201ENST00000452808 512 ntBASIC3.1□□□□□ -1.91
CLSTN1O94985 HSBP1P1-201ENST00000555205 166 ntBASIC3.1□□□□□ -1.91
CLSTN1O94985 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.1□□□□□ -1.91
CLSTN1O94985 MIR5188-201ENST00000583467 113 ntBASIC3.1□□□□□ -1.91
CLSTN1O94985 VN1R91P-201ENST00000594377 169 ntBASIC3.1□□□□□ -1.91
CLSTN1O94985 AC083806.3-201ENST00000614016 455 ntBASIC3.1□□□□□ -1.91
CLSTN1O94985 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
CLSTN1O94985 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CLSTN1O94985 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
CLSTN1O94985 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC3.09□□□□□ -1.91
CLSTN1O94985 SNORA67.2-201ENST00000384300 149 ntBASIC3.09□□□□□ -1.91
CLSTN1O94985 MIR181A2-201ENST00000384863 110 ntBASIC3.09□□□□□ -1.91
CLSTN1O94985 RNA5SP504-201ENST00000410676 117 ntBASIC3.09□□□□□ -1.91
CLSTN1O94985 COTL1P1-201ENST00000422309 375 ntBASIC3.09□□□□□ -1.91
CLSTN1O94985 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.09□□□□□ -1.91
CLSTN1O94985 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.09□□□□□ -1.91
CLSTN1O94985 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC3.09□□□□□ -1.91
CLSTN1O94985 RPS29P26-201ENST00000477483 171 ntBASIC3.09□□□□□ -1.91
CLSTN1O94985 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.09□□□□□ -1.91
CLSTN1O94985 RNU6-344P-201ENST00000516635 111 ntBASIC3.09□□□□□ -1.91
CLSTN1O94985 Y_RNA.711-201ENST00000516993 102 ntBASIC3.09□□□□□ -1.91
CLSTN1O94985 SNORD11B-201ENST00000607707 90 ntBASIC3.09□□□□□ -1.91
CLSTN1O94985 AL357075.2-201ENST00000614906 189 ntBASIC3.09□□□□□ -1.91
CLSTN1O94985 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.09□□□□□ -1.91
CLSTN1O94985 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC3.09□□□□□ -1.91
CLSTN1O94985 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CLSTN1O94985 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
CLSTN1O94985 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.09□□□□□ -1.92
CLSTN1O94985 ZNF658B-202ENST00000615961 3375 ntBASIC3.09□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms