Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.05□□□□□ -2.08
BEST1O76090 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.05□□□□□ -2.08
BEST1O76090 RNU2-34P-201ENST00000516534 121 ntBASIC2.05□□□□□ -2.08
BEST1O76090 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC2.05□□□□□ -2.08
BEST1O76090 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.05□□□□□ -2.08
BEST1O76090 MIR4790-201ENST00000577799 79 ntBASIC2.05□□□□□ -2.08
BEST1O76090 MIR4753-201ENST00000585119 83 ntBASIC2.05□□□□□ -2.08
BEST1O76090 AC002984.1-201ENST00000591692 448 ntBASIC2.05□□□□□ -2.08
BEST1O76090 AC008749.1-201ENST00000597650 306 ntBASIC2.05□□□□□ -2.08
BEST1O76090 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.05□□□□□ -2.08
BEST1O76090 AC005296.1-201ENST00000616145 209 ntBASIC2.05□□□□□ -2.08
BEST1O76090 AC091932.3-201ENST00000624223 323 ntBASIC2.05□□□□□ -2.08
BEST1O76090 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
BEST1O76090 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
BEST1O76090 U8.13-201ENST00000390842 128 ntBASIC2.04□□□□□ -2.08
BEST1O76090 MTCO3P46-201ENST00000425787 232 ntBASIC2.04□□□□□ -2.08
BEST1O76090 ZNF355P-201ENST00000427301 3216 ntBASIC2.04□□□□□ -2.08
BEST1O76090 MTATP6P13-201ENST00000438531 667 ntBASIC2.04□□□□□ -2.08
BEST1O76090 AC003989.2-201ENST00000440224 169 ntBASIC2.04□□□□□ -2.08
BEST1O76090 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC2.04□□□□□ -2.08
BEST1O76090 MTCO3P8-201ENST00000453691 755 ntBASIC2.04□□□□□ -2.08
BEST1O76090 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.04□□□□□ -2.08
BEST1O76090 snoU13.30-201ENST00000458951 104 ntBASIC2.04□□□□□ -2.08
BEST1O76090 AC114982.1-201ENST00000469402 321 ntBASIC2.04□□□□□ -2.08
BEST1O76090 AC069439.1-201ENST00000494739 167 ntBASIC2.04□□□□□ -2.08
BEST1O76090 AC067942.3-201ENST00000512025 362 ntBASIC2.04□□□□□ -2.08
BEST1O76090 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.04□□□□□ -2.08
BEST1O76090 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.04□□□□□ -2.08
BEST1O76090 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.04□□□□□ -2.08
BEST1O76090 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC2.04□□□□□ -2.08
BEST1O76090 AC110588.1-201ENST00000559699 137 ntBASIC2.04□□□□□ -2.08
BEST1O76090 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.04□□□□□ -2.08
BEST1O76090 AC010928.2-201ENST00000588017 287 ntBASIC2.04□□□□□ -2.08
BEST1O76090 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.04□□□□□ -2.08
BEST1O76090 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
BEST1O76090 AL359851.1-201ENST00000569460 4997 ntBASIC2.03□□□□□ -2.08
BEST1O76090 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
BEST1O76090 RNU6-245P-201ENST00000384020 107 ntBASIC2.03□□□□□ -2.08
BEST1O76090 MIR32-201ENST00000384965 70 ntBASIC2.03□□□□□ -2.08
BEST1O76090 MIR153-2-201ENST00000385225 87 ntBASIC2.03□□□□□ -2.08
BEST1O76090 RNU6-174P-201ENST00000410406 106 ntBASIC2.03□□□□□ -2.08
BEST1O76090 Y_RNA.599-201ENST00000410489 109 ntBASIC2.03□□□□□ -2.08
BEST1O76090 MTND3P8-201ENST00000412909 339 ntBASIC2.03□□□□□ -2.08
BEST1O76090 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.03□□□□□ -2.08
BEST1O76090 RNA5SP57-201ENST00000459463 123 ntBASIC2.03□□□□□ -2.08
BEST1O76090 AC010531.2-201ENST00000465012 153 ntBASIC2.03□□□□□ -2.08
BEST1O76090 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2.03□□□□□ -2.08
BEST1O76090 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.03□□□□□ -2.08
BEST1O76090 SUMO2P18-201ENST00000518873 252 ntBASIC2.03□□□□□ -2.08
BEST1O76090 RRN3P3-201ENST00000549207 578 ntBASIC2.03□□□□□ -2.08
BEST1O76090 MIR4742-201ENST00000581069 85 ntBASIC2.03□□□□□ -2.08
BEST1O76090 AC011712.1-201ENST00000588959 234 ntBASIC2.03□□□□□ -2.08
BEST1O76090 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.03□□□□□ -2.08
BEST1O76090 MIR6128-201ENST00000615528 109 ntBASIC2.03□□□□□ -2.08
BEST1O76090 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC2.03□□□□□ -2.08
BEST1O76090 ZNF204P-201ENST00000416749 2397 ntBASIC2.02□□□□□ -2.09
BEST1O76090 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.02□□□□□ -2.09
BEST1O76090 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
BEST1O76090 AL159152.1-201ENST00000635019 2587 ntBASIC2.02□□□□□ -2.09
BEST1O76090 RNU4-52P-201ENST00000384209 138 ntBASIC2.02□□□□□ -2.09
BEST1O76090 Y_RNA.490-201ENST00000384413 102 ntBASIC2.02□□□□□ -2.09
BEST1O76090 AC009310.1-201ENST00000414414 451 ntBASIC2.02□□□□□ -2.09
BEST1O76090 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.02□□□□□ -2.09
BEST1O76090 AC074290.1-201ENST00000448883 135 ntBASIC2.02□□□□□ -2.09
BEST1O76090 PPP1R2P5-201ENST00000457256 603 ntBASIC2.02□□□□□ -2.09
BEST1O76090 AC090255.1-201ENST00000495779 349 ntBASIC2.02□□□□□ -2.09
BEST1O76090 AC018710.1-201ENST00000506509 158 ntBASIC2.02□□□□□ -2.09
BEST1O76090 AC116337.1-201ENST00000509680 687 ntBASIC2.02□□□□□ -2.09
BEST1O76090 RNVU1-2-201ENST00000516326 135 ntBASIC2.02□□□□□ -2.09
BEST1O76090 RNU6-948P-201ENST00000516374 107 ntBASIC2.02□□□□□ -2.09
BEST1O76090 Y_RNA.682-201ENST00000516457 100 ntBASIC2.02□□□□□ -2.09
BEST1O76090 RNU1-40P-201ENST00000516816 164 ntBASIC2.02□□□□□ -2.09
BEST1O76090 RNU1-97P-201ENST00000516872 164 ntBASIC2.02□□□□□ -2.09
BEST1O76090 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC2.02□□□□□ -2.09
BEST1O76090 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.02□□□□□ -2.09
BEST1O76090 MIR6715A-201ENST00000615929 79 ntBASIC2.02□□□□□ -2.09
BEST1O76090 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.02□□□□□ -2.09
BEST1O76090 AP000553.5-201ENST00000641933 54 ntBASIC2.02□□□□□ -2.09
BEST1O76090 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
BEST1O76090 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
BEST1O76090 MIR586-201ENST00000385035 97 ntBASIC2.01□□□□□ -2.09
BEST1O76090 AL356776.1-201ENST00000406574 447 ntBASIC2.01□□□□□ -2.09
BEST1O76090 Z82188.1-201ENST00000436709 154 ntBASIC2.01□□□□□ -2.09
BEST1O76090 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.01□□□□□ -2.09
BEST1O76090 SNORD5.1-201ENST00000458800 75 ntBASIC2.01□□□□□ -2.09
BEST1O76090 RN7SKP210-201ENST00000459176 261 ntBASIC2.01□□□□□ -2.09
BEST1O76090 RPL23AP42-201ENST00000471152 471 ntBASIC2.01□□□□□ -2.09
BEST1O76090 MTND5P5-201ENST00000503764 376 ntBASIC2.01□□□□□ -2.09
BEST1O76090 AC046134.1-201ENST00000514454 666 ntBASIC2.01□□□□□ -2.09
BEST1O76090 RNU6-344P-201ENST00000516635 111 ntBASIC2.01□□□□□ -2.09
BEST1O76090 RNU6-58P-201ENST00000517143 103 ntBASIC2.01□□□□□ -2.09
BEST1O76090 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.01□□□□□ -2.09
BEST1O76090 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.01□□□□□ -2.09
BEST1O76090 AC022254.1-201ENST00000567857 235 ntBASIC2.01□□□□□ -2.09
BEST1O76090 MIR4713-201ENST00000582691 75 ntBASIC2.01□□□□□ -2.09
BEST1O76090 MIR4448-201ENST00000584360 86 ntBASIC2.01□□□□□ -2.09
BEST1O76090 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
BEST1O76090 KPNA2P1-201ENST00000458289 1591 ntBASIC2.01□□□□□ -2.09
BEST1O76090 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.09
BEST1O76090 RNU6-593P-201ENST00000364716 112 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms