Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
CDKL5O76039 RNU6-1266P-201ENST00000362794 105 ntBASIC3.02□□□□□ -1.93
CDKL5O76039 Y_RNA.65-201ENST00000362846 100 ntBASIC3.02□□□□□ -1.93
CDKL5O76039 RNU6-1285P-201ENST00000363480 105 ntBASIC3.02□□□□□ -1.93
CDKL5O76039 RNU6-281P-201ENST00000384212 103 ntBASIC3.02□□□□□ -1.93
CDKL5O76039 RNU6-159P-201ENST00000391080 106 ntBASIC3.02□□□□□ -1.93
CDKL5O76039 SUMO1P3-201ENST00000439961 304 ntBASIC3.02□□□□□ -1.93
CDKL5O76039 AL161651.1-201ENST00000440882 223 ntBASIC3.02□□□□□ -1.93
CDKL5O76039 AC012308.1-201ENST00000451232 178 ntBASIC3.02□□□□□ -1.93
CDKL5O76039 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC3.02□□□□□ -1.93
CDKL5O76039 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.02□□□□□ -1.93
CDKL5O76039 RPL26P26-201ENST00000480251 434 ntBASIC3.02□□□□□ -1.93
CDKL5O76039 RPL30P14-201ENST00000482744 348 ntBASIC3.02□□□□□ -1.93
CDKL5O76039 SRIP1-201ENST00000489235 288 ntBASIC3.02□□□□□ -1.93
CDKL5O76039 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.02□□□□□ -1.93
CDKL5O76039 RN7SKP132-201ENST00000516001 208 ntBASIC3.02□□□□□ -1.93
CDKL5O76039 SNORA31.16-201ENST00000516773 139 ntBASIC3.02□□□□□ -1.93
CDKL5O76039 RNU6-58P-201ENST00000517143 103 ntBASIC3.02□□□□□ -1.93
CDKL5O76039 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.02□□□□□ -1.93
CDKL5O76039 AC130289.1-201ENST00000577321 73 ntBASIC3.02□□□□□ -1.93
CDKL5O76039 AL078605.1-201ENST00000603529 500 ntBASIC3.02□□□□□ -1.93
CDKL5O76039 MIR7106-201ENST00000612419 65 ntBASIC3.02□□□□□ -1.93
CDKL5O76039 AC010297.1-201ENST00000623948 149 ntBASIC3.02□□□□□ -1.93
CDKL5O76039 MIR3199-2-201ENST00000636243 86 ntBASIC3.02□□□□□ -1.93
CDKL5O76039 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.02□□□□□ -1.93
CDKL5O76039 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.01□□□□□ -1.93
CDKL5O76039 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
CDKL5O76039 AC092268.1-201ENST00000342691 405 ntBASIC3.01□□□□□ -1.93
CDKL5O76039 RNU6-290P-201ENST00000365212 101 ntBASIC3.01□□□□□ -1.93
CDKL5O76039 RNU6-487P-201ENST00000365430 104 ntBASIC3.01□□□□□ -1.93
CDKL5O76039 SNORD63-201ENST00000384262 68 ntBASIC3.01□□□□□ -1.93
CDKL5O76039 Y_RNA.462-201ENST00000384268 102 ntBASIC3.01□□□□□ -1.93
CDKL5O76039 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
CDKL5O76039 SNORA26.3-201ENST00000391119 136 ntBASIC3.01□□□□□ -1.93
CDKL5O76039 SNORD58.1-201ENST00000391313 66 ntBASIC3.01□□□□□ -1.93
CDKL5O76039 RNU4-30P-201ENST00000410245 143 ntBASIC3.01□□□□□ -1.93
CDKL5O76039 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.01□□□□□ -1.93
CDKL5O76039 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC3.01□□□□□ -1.93
CDKL5O76039 AC078809.1-201ENST00000427601 140 ntBASIC3.01□□□□□ -1.93
CDKL5O76039 AL714022.1-201ENST00000439897 151 ntBASIC3.01□□□□□ -1.93
CDKL5O76039 AC010099.1-201ENST00000455434 375 ntBASIC3.01□□□□□ -1.93
CDKL5O76039 SNORD109B-201ENST00000458961 67 ntBASIC3.01□□□□□ -1.93
CDKL5O76039 SNORD109A-201ENST00000459128 67 ntBASIC3.01□□□□□ -1.93
CDKL5O76039 GZMAP1-201ENST00000503054 631 ntBASIC3.01□□□□□ -1.93
CDKL5O76039 RNU5B-3P-201ENST00000516601 115 ntBASIC3.01□□□□□ -1.93
CDKL5O76039 RN7SKP49-201ENST00000516675 260 ntBASIC3.01□□□□□ -1.93
CDKL5O76039 AP000867.2-201ENST00000532468 320 ntBASIC3.01□□□□□ -1.93
CDKL5O76039 AC021231.3-201ENST00000558497 370 ntBASIC3.01□□□□□ -1.93
CDKL5O76039 LARP7P3-201ENST00000579888 337 ntBASIC3.01□□□□□ -1.93
CDKL5O76039 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.01□□□□□ -1.93
CDKL5O76039 AC137590.2-201ENST00000619709 240 ntBASIC3.01□□□□□ -1.93
CDKL5O76039 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.01□□□□□ -1.93
CDKL5O76039 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CDKL5O76039 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.01□□□□□ -1.93
CDKL5O76039 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CDKL5O76039 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.01□□□□□ -1.93
CDKL5O76039 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CDKL5O76039 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3□□□□□ -1.93
CDKL5O76039 SNORD115-8-201ENST00000363856 82 ntBASIC3□□□□□ -1.93
CDKL5O76039 Y_RNA.269-201ENST00000364685 89 ntBASIC3□□□□□ -1.93
CDKL5O76039 Y_RNA.274-201ENST00000364714 101 ntBASIC3□□□□□ -1.93
CDKL5O76039 Y_RNA.286-201ENST00000364813 102 ntBASIC3□□□□□ -1.93
CDKL5O76039 RNU6-1180P-201ENST00000364935 107 ntBASIC3□□□□□ -1.93
CDKL5O76039 SNORD115-38-201ENST00000365037 82 ntBASIC3□□□□□ -1.93
CDKL5O76039 RNU4-70P-201ENST00000384579 139 ntBASIC3□□□□□ -1.93
CDKL5O76039 MIR329-1-201ENST00000385028 80 ntBASIC3□□□□□ -1.93
CDKL5O76039 MIR634-201ENST00000385208 97 ntBASIC3□□□□□ -1.93
CDKL5O76039 RNA5SP390-201ENST00000410191 113 ntBASIC3□□□□□ -1.93
CDKL5O76039 AC063976.3-201ENST00000426849 329 ntBASIC3□□□□□ -1.93
CDKL5O76039 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3□□□□□ -1.93
CDKL5O76039 RPS15AP5-201ENST00000436276 388 ntBASIC3□□□□□ -1.93
CDKL5O76039 AC025750.2-201ENST00000442609 450 ntBASIC3□□□□□ -1.93
CDKL5O76039 MIR4643-201ENST00000577473 78 ntBASIC3□□□□□ -1.93
CDKL5O76039 MIR3670-2-201ENST00000582974 65 ntBASIC3□□□□□ -1.93
CDKL5O76039 MIR3670-1-201ENST00000584160 65 ntBASIC3□□□□□ -1.93
CDKL5O76039 MIR3670-3-201ENST00000584855 65 ntBASIC3□□□□□ -1.93
CDKL5O76039 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC3□□□□□ -1.93
CDKL5O76039 MIR3670-4-201ENST00000612260 65 ntBASIC3□□□□□ -1.93
CDKL5O76039 U2.14-201ENST00000615943 113 ntBASIC3□□□□□ -1.93
CDKL5O76039 AC006386.2-201ENST00000624491 75 ntBASIC3□□□□□ -1.93
CDKL5O76039 AC012005.1-201ENST00000624575 75 ntBASIC3□□□□□ -1.93
CDKL5O76039 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3□□□□□ -1.93
CDKL5O76039 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3□□□□□ -1.93
CDKL5O76039 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
CDKL5O76039 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
CDKL5O76039 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CDKL5O76039 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CDKL5O76039 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CDKL5O76039 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CDKL5O76039 RNU4-90P-201ENST00000362773 141 ntBASIC2.99□□□□□ -1.93
CDKL5O76039 Y_RNA.117-201ENST00000363294 101 ntBASIC2.99□□□□□ -1.93
CDKL5O76039 RNA5SP393-201ENST00000363423 117 ntBASIC2.99□□□□□ -1.93
CDKL5O76039 RNU6-961P-201ENST00000363893 105 ntBASIC2.99□□□□□ -1.93
CDKL5O76039 RNY1-201ENST00000364228 113 ntBASIC2.99□□□□□ -1.93
CDKL5O76039 RNU1-138P-201ENST00000384093 164 ntBASIC2.99□□□□□ -1.93
CDKL5O76039 AL133475.1-201ENST00000404414 305 ntBASIC2.99□□□□□ -1.93
CDKL5O76039 AL603908.1-201ENST00000406098 201 ntBASIC2.99□□□□□ -1.93
CDKL5O76039 RNU2-49P-201ENST00000410666 184 ntBASIC2.99□□□□□ -1.93
CDKL5O76039 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.99□□□□□ -1.93
CDKL5O76039 AC019205.3-201ENST00000424573 156 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms