Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 RNU6-21P-201ENST00000384710 107 ntBASIC3.58□□□□□ -1.84
VAMP4O75379 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.58□□□□□ -1.84
VAMP4O75379 COTL1P1-201ENST00000422309 375 ntBASIC3.58□□□□□ -1.84
VAMP4O75379 PIGPP3-201ENST00000425307 415 ntBASIC3.58□□□□□ -1.84
VAMP4O75379 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.58□□□□□ -1.84
VAMP4O75379 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.58□□□□□ -1.84
VAMP4O75379 AC025750.2-201ENST00000442609 450 ntBASIC3.58□□□□□ -1.84
VAMP4O75379 AC010095.1-201ENST00000443543 144 ntBASIC3.58□□□□□ -1.84
VAMP4O75379 AL138752.1-201ENST00000452964 351 ntBASIC3.58□□□□□ -1.84
VAMP4O75379 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.58□□□□□ -1.84
VAMP4O75379 snoU13.14-201ENST00000459372 104 ntBASIC3.58□□□□□ -1.84
VAMP4O75379 AP001486.1-201ENST00000463339 476 ntBASIC3.58□□□□□ -1.84
VAMP4O75379 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.58□□□□□ -1.84
VAMP4O75379 RNU5F-2P-201ENST00000516066 82 ntBASIC3.58□□□□□ -1.84
VAMP4O75379 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC3.58□□□□□ -1.84
VAMP4O75379 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.58□□□□□ -1.84
VAMP4O75379 RPS15AP11-201ENST00000594193 385 ntBASIC3.58□□□□□ -1.84
VAMP4O75379 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.58□□□□□ -1.84
VAMP4O75379 AL137843.1-201ENST00000605078 385 ntBASIC3.58□□□□□ -1.84
VAMP4O75379 AC037487.3-201ENST00000606668 112 ntBASIC3.58□□□□□ -1.84
VAMP4O75379 SNORD98-201ENST00000636377 67 ntBASIC3.58□□□□□ -1.84
VAMP4O75379 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
VAMP4O75379 AL109809.4-201ENST00000603520 2185 ntBASIC3.58□□□□□ -1.84
VAMP4O75379 Y_RNA.569-201ENST00000384749 103 ntBASIC3.57□□□□□ -1.84
VAMP4O75379 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
VAMP4O75379 U3.26-201ENST00000391236 204 ntBASIC3.57□□□□□ -1.84
VAMP4O75379 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.57□□□□□ -1.84
VAMP4O75379 SNORA25.14-201ENST00000516481 132 ntBASIC3.57□□□□□ -1.84
VAMP4O75379 Y_RNA.683-201ENST00000516508 93 ntBASIC3.57□□□□□ -1.84
VAMP4O75379 RNU7-110P-201ENST00000516891 62 ntBASIC3.57□□□□□ -1.84
VAMP4O75379 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC3.57□□□□□ -1.84
VAMP4O75379 MIR3923-201ENST00000579521 83 ntBASIC3.57□□□□□ -1.84
VAMP4O75379 AC004792.1-201ENST00000614523 137 ntBASIC3.57□□□□□ -1.84
VAMP4O75379 FTX_2.1-201ENST00000618816 94 ntBASIC3.57□□□□□ -1.84
VAMP4O75379 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.57□□□□□ -1.84
VAMP4O75379 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
VAMP4O75379 Y_RNA.274-201ENST00000364714 101 ntBASIC3.56□□□□□ -1.84
VAMP4O75379 Y_RNA.297-201ENST00000364950 91 ntBASIC3.56□□□□□ -1.84
VAMP4O75379 AL138827.1-201ENST00000402666 306 ntBASIC3.56□□□□□ -1.84
VAMP4O75379 MIR1298-201ENST00000408783 112 ntBASIC3.56□□□□□ -1.84
VAMP4O75379 RNU4-30P-201ENST00000410245 143 ntBASIC3.56□□□□□ -1.84
VAMP4O75379 AC087499.2-201ENST00000432861 149 ntBASIC3.56□□□□□ -1.84
VAMP4O75379 SUMO1P3-201ENST00000439961 304 ntBASIC3.56□□□□□ -1.84
VAMP4O75379 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.56□□□□□ -1.84
VAMP4O75379 PRELID3BP1-201ENST00000457142 540 ntBASIC3.56□□□□□ -1.84
VAMP4O75379 AC025281.1-201ENST00000567026 265 ntBASIC3.56□□□□□ -1.84
VAMP4O75379 AL391813.1-201ENST00000603098 260 ntBASIC3.56□□□□□ -1.84
VAMP4O75379 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
VAMP4O75379 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
VAMP4O75379 AC008264.2-201ENST00000610193 3731 ntBASIC3.55□□□□□ -1.84
VAMP4O75379 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
VAMP4O75379 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
VAMP4O75379 SNORD114-19-201ENST00000363072 75 ntBASIC3.55□□□□□ -1.84
VAMP4O75379 RNU6-529P-201ENST00000363383 104 ntBASIC3.55□□□□□ -1.84
VAMP4O75379 Y_RNA.179-201ENST00000363844 90 ntBASIC3.55□□□□□ -1.84
VAMP4O75379 RNU6-1175P-201ENST00000365200 107 ntBASIC3.55□□□□□ -1.84
VAMP4O75379 RNA5SP252-201ENST00000391131 119 ntBASIC3.55□□□□□ -1.84
VAMP4O75379 RNU6-1140P-201ENST00000410517 106 ntBASIC3.55□□□□□ -1.84
VAMP4O75379 RPL23AP36-201ENST00000413895 458 ntBASIC3.55□□□□□ -1.84
VAMP4O75379 AL365496.1-201ENST00000426885 215 ntBASIC3.55□□□□□ -1.84
VAMP4O75379 AC104332.2-201ENST00000429959 156 ntBASIC3.55□□□□□ -1.84
VAMP4O75379 AL049873.1-201ENST00000480540 376 ntBASIC3.55□□□□□ -1.84
VAMP4O75379 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.55□□□□□ -1.84
VAMP4O75379 RNA5SP380-201ENST00000517190 98 ntBASIC3.55□□□□□ -1.84
VAMP4O75379 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.55□□□□□ -1.84
VAMP4O75379 ZNF861P-201ENST00000588126 639 ntBASIC3.55□□□□□ -1.84
VAMP4O75379 AC008749.1-201ENST00000597650 306 ntBASIC3.55□□□□□ -1.84
VAMP4O75379 AL357075.2-201ENST00000614906 189 ntBASIC3.55□□□□□ -1.84
VAMP4O75379 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
VAMP4O75379 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
VAMP4O75379 ZNF204P-201ENST00000416749 2397 ntBASIC3.55□□□□□ -1.84
VAMP4O75379 MTND5P35-201ENST00000557537 1720 ntBASIC3.55□□□□□ -1.84
VAMP4O75379 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
VAMP4O75379 Y_RNA.136-201ENST00000363444 102 ntBASIC3.54□□□□□ -1.84
VAMP4O75379 Y_RNA.180-201ENST00000363867 113 ntBASIC3.54□□□□□ -1.84
VAMP4O75379 AL590004.2-201ENST00000404787 371 ntBASIC3.54□□□□□ -1.84
VAMP4O75379 MIR320B2-201ENST00000408479 138 ntBASIC3.54□□□□□ -1.84
VAMP4O75379 RNU2-49P-201ENST00000410666 184 ntBASIC3.54□□□□□ -1.84
VAMP4O75379 AC105272.1-201ENST00000438604 198 ntBASIC3.54□□□□□ -1.84
VAMP4O75379 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.54□□□□□ -1.84
VAMP4O75379 SUMO1P2-201ENST00000452524 304 ntBASIC3.54□□□□□ -1.84
VAMP4O75379 COX6CP14-201ENST00000469580 174 ntBASIC3.54□□□□□ -1.84
VAMP4O75379 GTF3AP2-201ENST00000557014 266 ntBASIC3.54□□□□□ -1.84
VAMP4O75379 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
VAMP4O75379 ELOCP29-201ENST00000588193 334 ntBASIC3.54□□□□□ -1.84
VAMP4O75379 AC005176.2-201ENST00000596933 147 ntBASIC3.54□□□□□ -1.84
VAMP4O75379 SNRPGP20-201ENST00000604477 205 ntBASIC3.54□□□□□ -1.84
VAMP4O75379 AC022441.3-201ENST00000605737 136 ntBASIC3.54□□□□□ -1.84
VAMP4O75379 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.54□□□□□ -1.84
VAMP4O75379 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
VAMP4O75379 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
VAMP4O75379 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
VAMP4O75379 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
VAMP4O75379 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC3.53□□□□□ -1.84
VAMP4O75379 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.53□□□□□ -1.84
VAMP4O75379 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.53□□□□□ -1.84
VAMP4O75379 MAPK10-322ENST00000641485 4530 ntBASIC3.53□□□□□ -1.84
VAMP4O75379 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
VAMP4O75379 UBE2WP1-201ENST00000362030 340 ntBASIC3.53□□□□□ -1.84
VAMP4O75379 RNU1-62P-201ENST00000362599 164 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms