Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 RNU6-768P-201ENST00000384683 107 ntBASIC3.32□□□□□ -1.88
TRIM13O60858 AL355497.1-201ENST00000406262 551 ntBASIC3.32□□□□□ -1.88
TRIM13O60858 AC074117.2-201ENST00000417130 397 ntBASIC3.32□□□□□ -1.88
TRIM13O60858 AL035423.1-201ENST00000420331 213 ntBASIC3.32□□□□□ -1.88
TRIM13O60858 AC063976.4-201ENST00000421971 163 ntBASIC3.32□□□□□ -1.88
TRIM13O60858 AL121914.1-201ENST00000450188 156 ntBASIC3.32□□□□□ -1.88
TRIM13O60858 RPS27P29-201ENST00000463110 252 ntBASIC3.32□□□□□ -1.88
TRIM13O60858 AC007215.1-201ENST00000464893 276 ntBASIC3.32□□□□□ -1.88
TRIM13O60858 Y_RNA.694-201ENST00000516677 117 ntBASIC3.32□□□□□ -1.88
TRIM13O60858 RNU6-928P-201ENST00000516876 104 ntBASIC3.32□□□□□ -1.88
TRIM13O60858 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.32□□□□□ -1.88
TRIM13O60858 PARP1P2-201ENST00000556806 195 ntBASIC3.32□□□□□ -1.88
TRIM13O60858 MIR3609-201ENST00000582661 80 ntBASIC3.32□□□□□ -1.88
TRIM13O60858 AC006380.1-201ENST00000603598 186 ntBASIC3.32□□□□□ -1.88
TRIM13O60858 MIR7851-201ENST00000610611 160 ntBASIC3.32□□□□□ -1.88
TRIM13O60858 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
TRIM13O60858 AF117829.1-206ENST00000621883 3802 ntBASIC3.32□□□□□ -1.88
TRIM13O60858 SNORA50A-202ENST00000629536 136 ntBASIC3.32□□□□□ -1.88
TRIM13O60858 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.32□□□□□ -1.88
TRIM13O60858 ZNF702P-202ENST00000434269 1966 ntBASIC3.32□□□□□ -1.88
TRIM13O60858 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.32□□□□□ -1.88
TRIM13O60858 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
TRIM13O60858 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.31□□□□□ -1.88
TRIM13O60858 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
TRIM13O60858 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
TRIM13O60858 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.31□□□□□ -1.88
TRIM13O60858 Y_RNA.24-201ENST00000362508 103 ntBASIC3.31□□□□□ -1.88
TRIM13O60858 RNU6-799P-201ENST00000363567 107 ntBASIC3.31□□□□□ -1.88
TRIM13O60858 SNORA25.7-201ENST00000364375 127 ntBASIC3.31□□□□□ -1.88
TRIM13O60858 RNU6-245P-201ENST00000384020 107 ntBASIC3.31□□□□□ -1.88
TRIM13O60858 SNORA72.4-201ENST00000384174 132 ntBASIC3.31□□□□□ -1.88
TRIM13O60858 MIR544A-201ENST00000384855 91 ntBASIC3.31□□□□□ -1.88
TRIM13O60858 MIR15B-201ENST00000385045 98 ntBASIC3.31□□□□□ -1.88
TRIM13O60858 SNORA26.3-201ENST00000391119 136 ntBASIC3.31□□□□□ -1.88
TRIM13O60858 RN7SKP111-201ENST00000410349 271 ntBASIC3.31□□□□□ -1.88
TRIM13O60858 RNA5SP475-201ENST00000410568 110 ntBASIC3.31□□□□□ -1.88
TRIM13O60858 AC078809.1-201ENST00000427601 140 ntBASIC3.31□□□□□ -1.88
TRIM13O60858 RPL26P9-201ENST00000457466 433 ntBASIC3.31□□□□□ -1.88
TRIM13O60858 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC3.31□□□□□ -1.88
TRIM13O60858 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.31□□□□□ -1.88
TRIM13O60858 AC068657.1-201ENST00000520807 306 ntBASIC3.31□□□□□ -1.88
TRIM13O60858 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC3.31□□□□□ -1.88
TRIM13O60858 CR383656.8-201ENST00000549046 145 ntBASIC3.31□□□□□ -1.88
TRIM13O60858 MIR6748-201ENST00000610433 71 ntBASIC3.31□□□□□ -1.88
TRIM13O60858 AC002076.2-201ENST00000617362 122 ntBASIC3.31□□□□□ -1.88
TRIM13O60858 AC073308.1-201ENST00000623696 305 ntBASIC3.31□□□□□ -1.88
TRIM13O60858 MIR6844-201ENST00000637122 62 ntBASIC3.31□□□□□ -1.88
TRIM13O60858 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
TRIM13O60858 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
TRIM13O60858 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
TRIM13O60858 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
TRIM13O60858 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
TRIM13O60858 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
TRIM13O60858 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
TRIM13O60858 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
TRIM13O60858 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.3□□□□□ -1.88
TRIM13O60858 RNU6-324P-201ENST00000363957 106 ntBASIC3.3□□□□□ -1.88
TRIM13O60858 RNU6-915P-201ENST00000364943 103 ntBASIC3.3□□□□□ -1.88
TRIM13O60858 RNU6-969P-201ENST00000383900 105 ntBASIC3.3□□□□□ -1.88
TRIM13O60858 MIR526A2-201ENST00000390198 65 ntBASIC3.3□□□□□ -1.88
TRIM13O60858 SNORA40.5-201ENST00000391061 128 ntBASIC3.3□□□□□ -1.88
TRIM13O60858 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.3□□□□□ -1.88
TRIM13O60858 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.3□□□□□ -1.88
TRIM13O60858 AC099548.1-201ENST00000421443 426 ntBASIC3.3□□□□□ -1.88
TRIM13O60858 AC012306.1-201ENST00000423267 114 ntBASIC3.3□□□□□ -1.88
TRIM13O60858 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.3□□□□□ -1.88
TRIM13O60858 AC245047.8-201ENST00000456455 284 ntBASIC3.3□□□□□ -1.88
TRIM13O60858 RPL32P34-201ENST00000486380 400 ntBASIC3.3□□□□□ -1.88
TRIM13O60858 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
TRIM13O60858 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.3□□□□□ -1.88
TRIM13O60858 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.3□□□□□ -1.88
TRIM13O60858 MIR5582-201ENST00000579697 68 ntBASIC3.3□□□□□ -1.88
TRIM13O60858 AL359198.2-201ENST00000611836 194 ntBASIC3.3□□□□□ -1.88
TRIM13O60858 MIR6134-201ENST00000617606 109 ntBASIC3.3□□□□□ -1.88
TRIM13O60858 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
TRIM13O60858 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
TRIM13O60858 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.29□□□□□ -1.88
TRIM13O60858 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
TRIM13O60858 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.29□□□□□ -1.88
TRIM13O60858 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
TRIM13O60858 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
TRIM13O60858 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
TRIM13O60858 RN7SKP280-201ENST00000364196 304 ntBASIC3.29□□□□□ -1.88
TRIM13O60858 RNU6-454P-201ENST00000364292 107 ntBASIC3.29□□□□□ -1.88
TRIM13O60858 RNU1-100P-201ENST00000365255 165 ntBASIC3.29□□□□□ -1.88
TRIM13O60858 Y_RNA.393-201ENST00000383936 102 ntBASIC3.29□□□□□ -1.88
TRIM13O60858 SNORA48.8-201ENST00000391324 134 ntBASIC3.29□□□□□ -1.88
TRIM13O60858 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.29□□□□□ -1.88
TRIM13O60858 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.29□□□□□ -1.88
TRIM13O60858 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.29□□□□□ -1.88
TRIM13O60858 CYCSP4-201ENST00000429682 331 ntBASIC3.29□□□□□ -1.88
TRIM13O60858 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC3.29□□□□□ -1.88
TRIM13O60858 AC244670.1-201ENST00000436879 112 ntBASIC3.29□□□□□ -1.88
TRIM13O60858 HSPE1P13-201ENST00000451143 297 ntBASIC3.29□□□□□ -1.88
TRIM13O60858 RPL30P14-201ENST00000482744 348 ntBASIC3.29□□□□□ -1.88
TRIM13O60858 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.29□□□□□ -1.88
TRIM13O60858 RPS27AP10-201ENST00000496103 208 ntBASIC3.29□□□□□ -1.88
TRIM13O60858 RN7SKP18-201ENST00000516005 275 ntBASIC3.29□□□□□ -1.88
TRIM13O60858 RNU6-772P-201ENST00000516042 105 ntBASIC3.29□□□□□ -1.88
TRIM13O60858 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 185.1 ms