Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.19□□□□□ -2.06
PRKNO60260 AC104984.5-201ENST00000586878 94 ntBASIC2.19□□□□□ -2.06
PRKNO60260 MIR6715A-201ENST00000615929 79 ntBASIC2.19□□□□□ -2.06
PRKNO60260 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.19□□□□□ -2.06
PRKNO60260 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.18□□□□□ -2.06
PRKNO60260 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
PRKNO60260 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
PRKNO60260 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
PRKNO60260 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
PRKNO60260 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
PRKNO60260 RNA5SP393-201ENST00000363423 117 ntBASIC2.18□□□□□ -2.06
PRKNO60260 Y_RNA.158-201ENST00000363651 101 ntBASIC2.18□□□□□ -2.06
PRKNO60260 Y_RNA.557-201ENST00000384680 107 ntBASIC2.18□□□□□ -2.06
PRKNO60260 MIR628-201ENST00000385229 95 ntBASIC2.18□□□□□ -2.06
PRKNO60260 SNORA46.1-201ENST00000391069 153 ntBASIC2.18□□□□□ -2.06
PRKNO60260 RNU4-53P-201ENST00000410828 140 ntBASIC2.18□□□□□ -2.06
PRKNO60260 RNA5SP508-201ENST00000411327 119 ntBASIC2.18□□□□□ -2.06
PRKNO60260 HMGB3P2-201ENST00000411913 584 ntBASIC2.18□□□□□ -2.06
PRKNO60260 AL590556.1-201ENST00000423231 483 ntBASIC2.18□□□□□ -2.06
PRKNO60260 SUMO1P4-201ENST00000429430 302 ntBASIC2.18□□□□□ -2.06
PRKNO60260 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.18□□□□□ -2.06
PRKNO60260 AC090515.1-201ENST00000465295 476 ntBASIC2.18□□□□□ -2.06
PRKNO60260 RNU6-1137P-201ENST00000517073 99 ntBASIC2.18□□□□□ -2.06
PRKNO60260 GNAI2P1-201ENST00000541815 315 ntBASIC2.18□□□□□ -2.06
PRKNO60260 AC027288.2-201ENST00000553028 243 ntBASIC2.18□□□□□ -2.06
PRKNO60260 AC090617.3-201ENST00000573670 475 ntBASIC2.18□□□□□ -2.06
PRKNO60260 SNORD53-201ENST00000579969 78 ntBASIC2.18□□□□□ -2.06
PRKNO60260 MIR3945-201ENST00000581853 98 ntBASIC2.18□□□□□ -2.06
PRKNO60260 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.18□□□□□ -2.06
PRKNO60260 MIR3117-201ENST00000584034 78 ntBASIC2.18□□□□□ -2.06
PRKNO60260 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.18□□□□□ -2.06
PRKNO60260 AC067747.1-201ENST00000608026 250 ntBASIC2.18□□□□□ -2.06
PRKNO60260 AC069294.1-201ENST00000608397 350 ntBASIC2.18□□□□□ -2.06
PRKNO60260 PCGEM1.1-201ENST00000613431 131 ntBASIC2.18□□□□□ -2.06
PRKNO60260 U2.1-201ENST00000618978 145 ntBASIC2.18□□□□□ -2.06
PRKNO60260 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
PRKNO60260 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.18□□□□□ -2.06
PRKNO60260 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.18□□□□□ -2.06
PRKNO60260 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.18□□□□□ -2.06
PRKNO60260 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
PRKNO60260 Y_RNA.145-201ENST00000363527 102 ntBASIC2.17□□□□□ -2.06
PRKNO60260 AC117470.1-201ENST00000381974 330 ntBASIC2.17□□□□□ -2.06
PRKNO60260 Y_RNA.527-201ENST00000384573 102 ntBASIC2.17□□□□□ -2.06
PRKNO60260 SNORA12-201ENST00000391162 147 ntBASIC2.17□□□□□ -2.06
PRKNO60260 Y_RNA.645-201ENST00000391229 102 ntBASIC2.17□□□□□ -2.06
PRKNO60260 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
PRKNO60260 U6atac.2-201ENST00000408644 118 ntBASIC2.17□□□□□ -2.06
PRKNO60260 RNA5SP201-201ENST00000410316 124 ntBASIC2.17□□□□□ -2.06
PRKNO60260 RPS26P42-201ENST00000413485 326 ntBASIC2.17□□□□□ -2.06
PRKNO60260 AC113618.1-201ENST00000416747 285 ntBASIC2.17□□□□□ -2.06
PRKNO60260 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.17□□□□□ -2.06
PRKNO60260 WARS2P1-201ENST00000429678 537 ntBASIC2.17□□□□□ -2.06
PRKNO60260 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.17□□□□□ -2.06
PRKNO60260 RNU6-58P-201ENST00000517143 103 ntBASIC2.17□□□□□ -2.06
PRKNO60260 HSPE1P18-201ENST00000517602 280 ntBASIC2.17□□□□□ -2.06
PRKNO60260 AC022868.1-201ENST00000517767 391 ntBASIC2.17□□□□□ -2.06
PRKNO60260 UBL5P4-201ENST00000562584 236 ntBASIC2.17□□□□□ -2.06
PRKNO60260 MIR4680-201ENST00000580906 66 ntBASIC2.17□□□□□ -2.06
PRKNO60260 MIR5188-201ENST00000583467 113 ntBASIC2.17□□□□□ -2.06
PRKNO60260 VN1R91P-201ENST00000594377 169 ntBASIC2.17□□□□□ -2.06
PRKNO60260 AL713866.2-201ENST00000603579 219 ntBASIC2.17□□□□□ -2.06
PRKNO60260 AL138963.2-201ENST00000605137 226 ntBASIC2.17□□□□□ -2.06
PRKNO60260 AL590808.1-201ENST00000618696 141 ntBASIC2.17□□□□□ -2.06
PRKNO60260 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.17□□□□□ -2.06
PRKNO60260 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.17□□□□□ -2.06
PRKNO60260 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.16□□□□□ -2.06
PRKNO60260 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
PRKNO60260 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
PRKNO60260 RNU6-450P-201ENST00000364654 107 ntBASIC2.16□□□□□ -2.06
PRKNO60260 RNU1-138P-201ENST00000384093 164 ntBASIC2.16□□□□□ -2.06
PRKNO60260 SNORA3.2-201ENST00000408221 125 ntBASIC2.16□□□□□ -2.06
PRKNO60260 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.16□□□□□ -2.06
PRKNO60260 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.16□□□□□ -2.06
PRKNO60260 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.16□□□□□ -2.06
PRKNO60260 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.16□□□□□ -2.06
PRKNO60260 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.16□□□□□ -2.06
PRKNO60260 AC018634.1-201ENST00000437554 401 ntBASIC2.16□□□□□ -2.06
PRKNO60260 RPS12P2-201ENST00000439728 269 ntBASIC2.16□□□□□ -2.06
PRKNO60260 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.16□□□□□ -2.06
PRKNO60260 RNU6-1114P-201ENST00000516022 107 ntBASIC2.16□□□□□ -2.06
PRKNO60260 AC004486.1-201ENST00000546846 233 ntBASIC2.16□□□□□ -2.06
PRKNO60260 EIF4A1P12-201ENST00000551910 141 ntBASIC2.16□□□□□ -2.06
PRKNO60260 MIR5695-201ENST00000579717 85 ntBASIC2.16□□□□□ -2.06
PRKNO60260 MIR3670-2-201ENST00000582974 65 ntBASIC2.16□□□□□ -2.06
PRKNO60260 MIR3670-1-201ENST00000584160 65 ntBASIC2.16□□□□□ -2.06
PRKNO60260 MIR3670-3-201ENST00000584855 65 ntBASIC2.16□□□□□ -2.06
PRKNO60260 AC016727.2-201ENST00000603988 621 ntBASIC2.16□□□□□ -2.06
PRKNO60260 AC104695.3-201ENST00000604052 296 ntBASIC2.16□□□□□ -2.06
PRKNO60260 AL049779.4-201ENST00000604500 156 ntBASIC2.16□□□□□ -2.06
PRKNO60260 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.16□□□□□ -2.06
PRKNO60260 MIR3670-4-201ENST00000612260 65 ntBASIC2.16□□□□□ -2.06
PRKNO60260 AC005520.5-201ENST00000613926 164 ntBASIC2.16□□□□□ -2.06
PRKNO60260 AL138825.1-201ENST00000618587 192 ntBASIC2.16□□□□□ -2.06
PRKNO60260 AL162373.1-201ENST00000620433 407 ntBASIC2.16□□□□□ -2.06
PRKNO60260 ZNF204P-201ENST00000416749 2397 ntBASIC2.16□□□□□ -2.06
PRKNO60260 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.06
PRKNO60260 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.06
PRKNO60260 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
PRKNO60260 U3.9-201ENST00000363823 204 ntBASIC2.15□□□□□ -2.07
PRKNO60260 SNORA25.6-201ENST00000364121 118 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms