Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 AL359511.1-201ENST00000402970 211 ntBASIC2.08□□□□□ -2.08
SSX4O60224 RN7SKP192-201ENST00000411291 327 ntBASIC2.08□□□□□ -2.08
SSX4O60224 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.08□□□□□ -2.08
SSX4O60224 RPL23AP50-201ENST00000434149 455 ntBASIC2.08□□□□□ -2.08
SSX4O60224 AC004386.2-201ENST00000441858 148 ntBASIC2.08□□□□□ -2.08
SSX4O60224 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.08□□□□□ -2.08
SSX4O60224 MTCO3P8-201ENST00000453691 755 ntBASIC2.08□□□□□ -2.08
SSX4O60224 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC2.08□□□□□ -2.08
SSX4O60224 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.08□□□□□ -2.08
SSX4O60224 RPS29P21-201ENST00000496272 170 ntBASIC2.08□□□□□ -2.08
SSX4O60224 AC234781.5-201ENST00000508429 271 ntBASIC2.08□□□□□ -2.08
SSX4O60224 RNU6-58P-201ENST00000517143 103 ntBASIC2.08□□□□□ -2.08
SSX4O60224 AC027288.2-201ENST00000553028 243 ntBASIC2.08□□□□□ -2.08
SSX4O60224 ANP32BP3-201ENST00000559213 706 ntBASIC2.08□□□□□ -2.08
SSX4O60224 AC026470.2-201ENST00000561492 181 ntBASIC2.08□□□□□ -2.08
SSX4O60224 MIR5701-3-201ENST00000578890 82 ntBASIC2.08□□□□□ -2.08
SSX4O60224 MIR5701-1-201ENST00000585138 82 ntBASIC2.08□□□□□ -2.08
SSX4O60224 AL355802.3-201ENST00000607571 545 ntBASIC2.08□□□□□ -2.08
SSX4O60224 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.08□□□□□ -2.08
SSX4O60224 TCL6_2.1-201ENST00000615162 119 ntBASIC2.08□□□□□ -2.08
SSX4O60224 MIR5701-2-201ENST00000615634 82 ntBASIC2.08□□□□□ -2.08
SSX4O60224 AL008636.1-201ENST00000625038 1018 ntBASIC2.08□□□□□ -2.08
SSX4O60224 MTND4LP32-201ENST00000636111 270 ntBASIC2.08□□□□□ -2.08
SSX4O60224 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
SSX4O60224 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.08□□□□□ -2.08
SSX4O60224 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.07□□□□□ -2.08
SSX4O60224 Y_RNA.319-201ENST00000365138 92 ntBASIC2.07□□□□□ -2.08
SSX4O60224 RNU6-541P-201ENST00000384709 110 ntBASIC2.07□□□□□ -2.08
SSX4O60224 AC004866.1-201ENST00000411748 78 ntBASIC2.07□□□□□ -2.08
SSX4O60224 AL445305.1-201ENST00000432577 575 ntBASIC2.07□□□□□ -2.08
SSX4O60224 RNU6-717P-201ENST00000459076 104 ntBASIC2.07□□□□□ -2.08
SSX4O60224 AC097473.1-201ENST00000508142 408 ntBASIC2.07□□□□□ -2.08
SSX4O60224 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.07□□□□□ -2.08
SSX4O60224 RNU6-307P-201ENST00000516743 106 ntBASIC2.07□□□□□ -2.08
SSX4O60224 RNA5SP54-201ENST00000516951 92 ntBASIC2.07□□□□□ -2.08
SSX4O60224 AC093027.1-201ENST00000546698 429 ntBASIC2.07□□□□□ -2.08
SSX4O60224 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC2.07□□□□□ -2.08
SSX4O60224 MIR5006-201ENST00000583027 110 ntBASIC2.07□□□□□ -2.08
SSX4O60224 SNRPGP20-201ENST00000604477 205 ntBASIC2.07□□□□□ -2.08
SSX4O60224 LARP7P1-201ENST00000605576 316 ntBASIC2.07□□□□□ -2.08
SSX4O60224 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
SSX4O60224 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
SSX4O60224 RNA5SP456-201ENST00000364002 114 ntBASIC2.06□□□□□ -2.08
SSX4O60224 RNU6-438P-201ENST00000365561 103 ntBASIC2.06□□□□□ -2.08
SSX4O60224 SNORD14D-201ENST00000384390 87 ntBASIC2.06□□□□□ -2.08
SSX4O60224 SNORD116-29-201ENST00000384516 83 ntBASIC2.06□□□□□ -2.08
SSX4O60224 SNORA41-201ENST00000384675 132 ntBASIC2.06□□□□□ -2.08
SSX4O60224 MIR504-201ENST00000385065 83 ntBASIC2.06□□□□□ -2.08
SSX4O60224 HMGN2P39-201ENST00000398005 273 ntBASIC2.06□□□□□ -2.08
SSX4O60224 SNORD23.1-201ENST00000408212 104 ntBASIC2.06□□□□□ -2.08
SSX4O60224 U3.40-201ENST00000408706 208 ntBASIC2.06□□□□□ -2.08
SSX4O60224 HMGN2P38-201ENST00000423806 265 ntBASIC2.06□□□□□ -2.08
SSX4O60224 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.06□□□□□ -2.08
SSX4O60224 IPO7P1-201ENST00000442031 636 ntBASIC2.06□□□□□ -2.08
SSX4O60224 MTCO3P10-201ENST00000455912 772 ntBASIC2.06□□□□□ -2.08
SSX4O60224 RPL30P15-201ENST00000457129 321 ntBASIC2.06□□□□□ -2.08
SSX4O60224 RNU6-1198P-201ENST00000516904 67 ntBASIC2.06□□□□□ -2.08
SSX4O60224 Y_RNA.706-201ENST00000516933 99 ntBASIC2.06□□□□□ -2.08
SSX4O60224 SNORA31.25-201ENST00000517242 134 ntBASIC2.06□□□□□ -2.08
SSX4O60224 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.06□□□□□ -2.08
SSX4O60224 MIR4448-201ENST00000584360 86 ntBASIC2.06□□□□□ -2.08
SSX4O60224 AC100812.1-201ENST00000607622 580 ntBASIC2.06□□□□□ -2.08
SSX4O60224 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.06□□□□□ -2.08
SSX4O60224 AL359314.1-201ENST00000616913 261 ntBASIC2.06□□□□□ -2.08
SSX4O60224 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.06□□□□□ -2.08
SSX4O60224 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.06□□□□□ -2.08
SSX4O60224 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
SSX4O60224 MIRLET7G-201ENST00000362280 84 ntBASIC2.05□□□□□ -2.08
SSX4O60224 Y_RNA.67-201ENST00000362870 100 ntBASIC2.05□□□□□ -2.08
SSX4O60224 Y_RNA.99-201ENST00000363138 105 ntBASIC2.05□□□□□ -2.08
SSX4O60224 Y_RNA.259-201ENST00000364619 101 ntBASIC2.05□□□□□ -2.08
SSX4O60224 SNORD31B-201ENST00000364977 69 ntBASIC2.05□□□□□ -2.08
SSX4O60224 Y_RNA.332-201ENST00000365271 113 ntBASIC2.05□□□□□ -2.08
SSX4O60224 RNU6-1026P-201ENST00000384465 108 ntBASIC2.05□□□□□ -2.08
SSX4O60224 RNU6-700P-201ENST00000391043 107 ntBASIC2.05□□□□□ -2.08
SSX4O60224 MIR320B2-201ENST00000408479 138 ntBASIC2.05□□□□□ -2.08
SSX4O60224 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.05□□□□□ -2.08
SSX4O60224 DPH3P2-201ENST00000422618 250 ntBASIC2.05□□□□□ -2.08
SSX4O60224 MTND3P23-201ENST00000431980 347 ntBASIC2.05□□□□□ -2.08
SSX4O60224 SNRPEP8-201ENST00000442866 260 ntBASIC2.05□□□□□ -2.08
SSX4O60224 AC245102.2-201ENST00000448956 180 ntBASIC2.05□□□□□ -2.08
SSX4O60224 Y_RNA.653-201ENST00000459091 95 ntBASIC2.05□□□□□ -2.08
SSX4O60224 Y_RNA.632-201ENST00000459189 102 ntBASIC2.05□□□□□ -2.08
SSX4O60224 AC090255.1-201ENST00000495779 349 ntBASIC2.05□□□□□ -2.08
SSX4O60224 MTND3P22-201ENST00000510932 243 ntBASIC2.05□□□□□ -2.08
SSX4O60224 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC2.05□□□□□ -2.08
SSX4O60224 RNU6-120P-201ENST00000516077 103 ntBASIC2.05□□□□□ -2.08
SSX4O60224 RNA5SP281-201ENST00000516504 135 ntBASIC2.05□□□□□ -2.08
SSX4O60224 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.05□□□□□ -2.08
SSX4O60224 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.05□□□□□ -2.08
SSX4O60224 UBL5P4-201ENST00000562584 236 ntBASIC2.05□□□□□ -2.08
SSX4O60224 MIR4648-201ENST00000580107 72 ntBASIC2.05□□□□□ -2.08
SSX4O60224 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.05□□□□□ -2.08
SSX4O60224 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
SSX4O60224 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.04□□□□□ -2.08
SSX4O60224 RNU6-545P-201ENST00000362681 104 ntBASIC2.04□□□□□ -2.08
SSX4O60224 RNU6-137P-201ENST00000363680 108 ntBASIC2.04□□□□□ -2.08
SSX4O60224 RNU6-867P-201ENST00000364956 107 ntBASIC2.04□□□□□ -2.08
SSX4O60224 RNA5SP138-201ENST00000365098 114 ntBASIC2.04□□□□□ -2.08
SSX4O60224 RNU6-890P-201ENST00000384121 107 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms