Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 MIR549A-201ENST00000385268 96 ntBASIC0.65□□□□□ -2.31
SGCEO43556 RNA5SP467-201ENST00000391274 118 ntBASIC0.65□□□□□ -2.31
SGCEO43556 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.65□□□□□ -2.31
SGCEO43556 AC010154.1-201ENST00000425857 269 ntBASIC0.65□□□□□ -2.31
SGCEO43556 AC004941.2-201ENST00000427009 228 ntBASIC0.65□□□□□ -2.31
SGCEO43556 AC245047.7-201ENST00000440265 293 ntBASIC0.65□□□□□ -2.31
SGCEO43556 AC004386.2-201ENST00000441858 148 ntBASIC0.65□□□□□ -2.31
SGCEO43556 MTCO2P3-201ENST00000442543 421 ntBASIC0.65□□□□□ -2.31
SGCEO43556 MTND2P14-201ENST00000482139 351 ntBASIC0.65□□□□□ -2.31
SGCEO43556 AC105758.1-201ENST00000506038 399 ntBASIC0.65□□□□□ -2.31
SGCEO43556 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC0.65□□□□□ -2.31
SGCEO43556 MTATP6P9-201ENST00000515039 680 ntBASIC0.65□□□□□ -2.31
SGCEO43556 SNORD79.1-201ENST00000516069 84 ntBASIC0.65□□□□□ -2.31
SGCEO43556 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.65□□□□□ -2.31
SGCEO43556 AL121579.1-201ENST00000555129 305 ntBASIC0.65□□□□□ -2.31
SGCEO43556 MIR4703-201ENST00000577728 79 ntBASIC0.65□□□□□ -2.31
SGCEO43556 AC146944.4-201ENST00000602697 718 ntBASIC0.65□□□□□ -2.31
SGCEO43556 AC016727.2-201ENST00000603988 621 ntBASIC0.65□□□□□ -2.31
SGCEO43556 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC0.65□□□□□ -2.31
SGCEO43556 Y_RNA.124-201ENST00000363339 93 ntBASIC0.64□□□□□ -2.31
SGCEO43556 RNU1-93P-201ENST00000364704 169 ntBASIC0.64□□□□□ -2.31
SGCEO43556 RNU4-48P-201ENST00000365559 182 ntBASIC0.64□□□□□ -2.31
SGCEO43556 RPS3AP3-201ENST00000411933 242 ntBASIC0.64□□□□□ -2.31
SGCEO43556 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.64□□□□□ -2.31
SGCEO43556 AC009237.7-201ENST00000447357 229 ntBASIC0.64□□□□□ -2.31
SGCEO43556 RPS29P15-201ENST00000458329 171 ntBASIC0.64□□□□□ -2.31
SGCEO43556 SCARNA18-201ENST00000459004 134 ntBASIC0.64□□□□□ -2.31
SGCEO43556 AC092991.1-201ENST00000477176 376 ntBASIC0.64□□□□□ -2.31
SGCEO43556 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.64□□□□□ -2.31
SGCEO43556 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC0.64□□□□□ -2.31
SGCEO43556 AC006566.1-201ENST00000608943 513 ntBASIC0.64□□□□□ -2.31
SGCEO43556 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.64□□□□□ -2.31
SGCEO43556 AL513423.1-201ENST00000621695 132 ntBASIC0.64□□□□□ -2.31
SGCEO43556 OR4G1P-203ENST00000641984 1631 ntBASIC0.64□□□□□ -2.31
SGCEO43556 AC018630.2-201ENST00000534866 2403 ntBASIC0.63□□□□□ -2.31
SGCEO43556 MTND4P4-201ENST00000439033 1366 ntBASIC0.63□□□□□ -2.31
SGCEO43556 Y_RNA.399-201ENST00000383955 105 ntBASIC0.63□□□□□ -2.31
SGCEO43556 SNORA80D-201ENST00000384488 135 ntBASIC0.63□□□□□ -2.31
SGCEO43556 MIR586-201ENST00000385035 97 ntBASIC0.63□□□□□ -2.31
SGCEO43556 AL034345.1-201ENST00000407768 123 ntBASIC0.63□□□□□ -2.31
SGCEO43556 RPS26P42-201ENST00000413485 326 ntBASIC0.63□□□□□ -2.31
SGCEO43556 MTND5P15-201ENST00000434246 349 ntBASIC0.63□□□□□ -2.31
SGCEO43556 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC0.63□□□□□ -2.31
SGCEO43556 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC0.63□□□□□ -2.31
SGCEO43556 AC022364.2-201ENST00000457963 554 ntBASIC0.63□□□□□ -2.31
SGCEO43556 snoU13.6-201ENST00000458785 104 ntBASIC0.63□□□□□ -2.31
SGCEO43556 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC0.63□□□□□ -2.31
SGCEO43556 SNORA31.10-201ENST00000516482 106 ntBASIC0.63□□□□□ -2.31
SGCEO43556 RNU6-1069P-201ENST00000516612 133 ntBASIC0.63□□□□□ -2.31
SGCEO43556 RNU6-922P-201ENST00000516753 99 ntBASIC0.63□□□□□ -2.31
SGCEO43556 AL590705.4-201ENST00000532209 134 ntBASIC0.63□□□□□ -2.31
SGCEO43556 AGGF1P4-201ENST00000568249 801 ntBASIC0.63□□□□□ -2.31
SGCEO43556 MIR5695-201ENST00000579717 85 ntBASIC0.63□□□□□ -2.31
SGCEO43556 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.63□□□□□ -2.31
SGCEO43556 AL359075.3-201ENST00000613288 217 ntBASIC0.63□□□□□ -2.31
SGCEO43556 SNORD3E-202ENST00000627253 216 ntBASIC0.63□□□□□ -2.31
SGCEO43556 RNU4-76P-201ENST00000364509 141 ntBASIC0.62□□□□□ -2.31
SGCEO43556 MIR1276-201ENST00000408707 83 ntBASIC0.62□□□□□ -2.31
SGCEO43556 RPS3AP1-201ENST00000413190 320 ntBASIC0.62□□□□□ -2.31
SGCEO43556 AC008134.1-201ENST00000420943 193 ntBASIC0.62□□□□□ -2.31
SGCEO43556 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC0.62□□□□□ -2.31
SGCEO43556 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.62□□□□□ -2.31
SGCEO43556 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC0.62□□□□□ -2.31
SGCEO43556 AC022432.1-201ENST00000595739 310 ntBASIC0.62□□□□□ -2.31
SGCEO43556 AL162424.1-201ENST00000602325 221 ntBASIC0.62□□□□□ -2.31
SGCEO43556 AL390123.1-201ENST00000603216 237 ntBASIC0.62□□□□□ -2.31
SGCEO43556 AC136443.5-201ENST00000603741 370 ntBASIC0.62□□□□□ -2.31
SGCEO43556 AP000907.4-201ENST00000604143 237 ntBASIC0.62□□□□□ -2.31
SGCEO43556 MIR8054-201ENST00000620877 86 ntBASIC0.62□□□□□ -2.31
SGCEO43556 MIR6835-201ENST00000621552 64 ntBASIC0.62□□□□□ -2.31
SGCEO43556 MTND4P5-201ENST00000435821 1374 ntBASIC0.61□□□□□ -2.31
SGCEO43556 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC0.61□□□□□ -2.31
SGCEO43556 RNU6-1305P-201ENST00000364353 104 ntBASIC0.61□□□□□ -2.31
SGCEO43556 RNU6-505P-201ENST00000384427 107 ntBASIC0.61□□□□□ -2.31
SGCEO43556 MIR1-2-201ENST00000384961 85 ntBASIC0.61□□□□□ -2.31
SGCEO43556 Z99497.1-201ENST00000421282 135 ntBASIC0.61□□□□□ -2.31
SGCEO43556 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC0.61□□□□□ -2.31
SGCEO43556 AL606517.2-201ENST00000442855 241 ntBASIC0.61□□□□□ -2.31
SGCEO43556 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.61□□□□□ -2.31
SGCEO43556 RNU7-57P-201ENST00000459540 60 ntBASIC0.61□□□□□ -2.31
SGCEO43556 AC117454.1-201ENST00000491120 168 ntBASIC0.61□□□□□ -2.31
SGCEO43556 AC010493.1-201ENST00000513479 292 ntBASIC0.61□□□□□ -2.31
SGCEO43556 AC007834.2-201ENST00000536310 343 ntBASIC0.61□□□□□ -2.31
SGCEO43556 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.61□□□□□ -2.31
SGCEO43556 FAM106DP-201ENST00000586416 501 ntBASIC0.61□□□□□ -2.31
SGCEO43556 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.61□□□□□ -2.31
SGCEO43556 AL022161.1-201ENST00000604390 213 ntBASIC0.61□□□□□ -2.31
SGCEO43556 SNRPGP20-201ENST00000604477 205 ntBASIC0.61□□□□□ -2.31
SGCEO43556 RNU6-85P-201ENST00000605989 107 ntBASIC0.61□□□□□ -2.31
SGCEO43556 MIR98-201ENST00000606724 119 ntBASIC0.61□□□□□ -2.31
SGCEO43556 AL391834.2-201ENST00000609982 546 ntBASIC0.61□□□□□ -2.31
SGCEO43556 AC068792.1-201ENST00000621354 417 ntBASIC0.61□□□□□ -2.31
SGCEO43556 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.61□□□□□ -2.31
SGCEO43556 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.6□□□□□ -2.31
SGCEO43556 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.6□□□□□ -2.31
SGCEO43556 Y_RNA.4-201ENST00000362333 112 ntBASIC0.6□□□□□ -2.31
SGCEO43556 RNU6-440P-201ENST00000390882 105 ntBASIC0.6□□□□□ -2.31
SGCEO43556 MIR942-201ENST00000401111 86 ntBASIC0.6□□□□□ -2.31
SGCEO43556 MRPL42P3-201ENST00000401492 326 ntBASIC0.6□□□□□ -2.31
SGCEO43556 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms