Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HOXA2O43364 MIR5582-201ENST00000579697 68 ntBASIC4.42□□□□□ -1.7
HOXA2O43364 MIR4444-1-201ENST00000581696 74 ntBASIC4.42□□□□□ -1.7
HOXA2O43364 MIR2681-201ENST00000581814 105 ntBASIC4.42□□□□□ -1.7
HOXA2O43364 MIR4444-2-201ENST00000584390 74 ntBASIC4.42□□□□□ -1.7
HOXA2O43364 AC097639.2-201ENST00000603159 172 ntBASIC4.42□□□□□ -1.7
HOXA2O43364 AC008739.3-201ENST00000603262 127 ntBASIC4.42□□□□□ -1.7
HOXA2O43364 MIR7702-201ENST00000621931 59 ntBASIC4.42□□□□□ -1.7
HOXA2O43364 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
HOXA2O43364 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC4.42□□□□□ -1.7
HOXA2O43364 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HOXA2O43364 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.42□□□□□ -1.7
HOXA2O43364 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HOXA2O43364 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HOXA2O43364 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
HOXA2O43364 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.41□□□□□ -1.7
HOXA2O43364 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
HOXA2O43364 AC010680.1-201ENST00000590024 3590 ntBASIC4.41□□□□□ -1.7
HOXA2O43364 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.41□□□□□ -1.7
HOXA2O43364 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
HOXA2O43364 RNU6-57P-201ENST00000411348 103 ntBASIC4.41□□□□□ -1.7
HOXA2O43364 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC4.41□□□□□ -1.7
HOXA2O43364 MTCO1P44-201ENST00000441935 243 ntBASIC4.41□□□□□ -1.7
HOXA2O43364 AL133547.1-201ENST00000448546 220 ntBASIC4.41□□□□□ -1.7
HOXA2O43364 RN7SKP19-201ENST00000516016 252 ntBASIC4.41□□□□□ -1.7
HOXA2O43364 SNORD77.4-201ENST00000516158 81 ntBASIC4.41□□□□□ -1.7
HOXA2O43364 AC107934.2-201ENST00000518653 310 ntBASIC4.41□□□□□ -1.7
HOXA2O43364 AC025627.2-201ENST00000576220 160 ntBASIC4.41□□□□□ -1.7
HOXA2O43364 MIR4644-201ENST00000579929 84 ntBASIC4.41□□□□□ -1.7
HOXA2O43364 uc_338.4-201ENST00000616635 176 ntBASIC4.41□□□□□ -1.7
HOXA2O43364 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.41□□□□□ -1.7
HOXA2O43364 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.41□□□□□ -1.7
HOXA2O43364 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.41□□□□□ -1.7
HOXA2O43364 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.41□□□□□ -1.7
HOXA2O43364 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
HOXA2O43364 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
HOXA2O43364 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.4□□□□□ -1.7
HOXA2O43364 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
HOXA2O43364 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
HOXA2O43364 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.4□□□□□ -1.71
HOXA2O43364 Y_RNA.634-201ENST00000364811 113 ntBASIC4.4□□□□□ -1.71
HOXA2O43364 RNU6-975P-201ENST00000384296 105 ntBASIC4.4□□□□□ -1.71
HOXA2O43364 MIR548A1-201ENST00000385041 97 ntBASIC4.4□□□□□ -1.71
HOXA2O43364 RNA5SP171-201ENST00000391071 115 ntBASIC4.4□□□□□ -1.71
HOXA2O43364 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC4.4□□□□□ -1.71
HOXA2O43364 RPL31P61-201ENST00000496160 376 ntBASIC4.4□□□□□ -1.71
HOXA2O43364 AC105245.1-201ENST00000581934 244 ntBASIC4.4□□□□□ -1.71
HOXA2O43364 MIR6868-201ENST00000611215 58 ntBASIC4.4□□□□□ -1.71
HOXA2O43364 AC025166.1-201ENST00000612411 163 ntBASIC4.4□□□□□ -1.71
HOXA2O43364 AC006435.5-201ENST00000624486 112 ntBASIC4.4□□□□□ -1.71
HOXA2O43364 AC090517.3-201ENST00000625170 141 ntBASIC4.4□□□□□ -1.71
HOXA2O43364 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.4□□□□□ -1.71
HOXA2O43364 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
HOXA2O43364 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.4□□□□□ -1.71
HOXA2O43364 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
HOXA2O43364 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HOXA2O43364 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
HOXA2O43364 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
HOXA2O43364 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
HOXA2O43364 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC4.39□□□□□ -1.71
HOXA2O43364 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HOXA2O43364 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HOXA2O43364 RNU6-1164P-201ENST00000364428 107 ntBASIC4.39□□□□□ -1.71
HOXA2O43364 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
HOXA2O43364 MIR1294-201ENST00000408503 142 ntBASIC4.39□□□□□ -1.71
HOXA2O43364 EIF4EP4-201ENST00000424916 578 ntBASIC4.39□□□□□ -1.71
HOXA2O43364 AC008155.2-201ENST00000464337 397 ntBASIC4.39□□□□□ -1.71
HOXA2O43364 AC010531.2-201ENST00000465012 153 ntBASIC4.39□□□□□ -1.71
HOXA2O43364 RNU6-781P-201ENST00000516377 101 ntBASIC4.39□□□□□ -1.71
HOXA2O43364 SNORA18.4-201ENST00000516440 124 ntBASIC4.39□□□□□ -1.71
HOXA2O43364 RNU6-126P-201ENST00000516685 103 ntBASIC4.39□□□□□ -1.71
HOXA2O43364 RNU6-537P-201ENST00000517277 103 ntBASIC4.39□□□□□ -1.71
HOXA2O43364 RNU2-60P-201ENST00000517290 128 ntBASIC4.39□□□□□ -1.71
HOXA2O43364 CYCSP30-201ENST00000546447 172 ntBASIC4.39□□□□□ -1.71
HOXA2O43364 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC4.39□□□□□ -1.71
HOXA2O43364 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.39□□□□□ -1.71
HOXA2O43364 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HOXA2O43364 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HOXA2O43364 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.39□□□□□ -1.71
HOXA2O43364 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HOXA2O43364 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
HOXA2O43364 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HOXA2O43364 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HOXA2O43364 MIR450A1-201ENST00000362262 91 ntBASIC4.38□□□□□ -1.71
HOXA2O43364 Y_RNA.91-201ENST00000363042 107 ntBASIC4.38□□□□□ -1.71
HOXA2O43364 SNORD96B-201ENST00000386148 79 ntBASIC4.38□□□□□ -1.71
HOXA2O43364 MIR1271-201ENST00000408537 86 ntBASIC4.38□□□□□ -1.71
HOXA2O43364 RNA5SP511-201ENST00000410487 115 ntBASIC4.38□□□□□ -1.71
HOXA2O43364 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC4.38□□□□□ -1.71
HOXA2O43364 AC097463.2-201ENST00000421074 142 ntBASIC4.38□□□□□ -1.71
HOXA2O43364 AC017083.1-201ENST00000428093 483 ntBASIC4.38□□□□□ -1.71
HOXA2O43364 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC4.38□□□□□ -1.71
HOXA2O43364 RNA5SP143-201ENST00000516936 115 ntBASIC4.38□□□□□ -1.71
HOXA2O43364 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.38□□□□□ -1.71
HOXA2O43364 AC015720.1-201ENST00000565251 277 ntBASIC4.38□□□□□ -1.71
HOXA2O43364 RPL23AP91-201ENST00000569211 455 ntBASIC4.38□□□□□ -1.71
HOXA2O43364 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC4.38□□□□□ -1.71
HOXA2O43364 MIR4474-201ENST00000579189 78 ntBASIC4.38□□□□□ -1.71
HOXA2O43364 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.38□□□□□ -1.71
HOXA2O43364 CR392039.5-201ENST00000623201 510 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms