Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 Y_RNA.319-201ENST00000365138 92 ntBASIC2.09□□□□□ -2.07
TO15178 RNU1-51P-201ENST00000365345 176 ntBASIC2.09□□□□□ -2.07
TO15178 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.09□□□□□ -2.07
TO15178 SNORA18.2-201ENST00000383865 132 ntBASIC2.09□□□□□ -2.07
TO15178 RNU4-52P-201ENST00000384209 138 ntBASIC2.09□□□□□ -2.07
TO15178 SNORA75.6-201ENST00000391318 127 ntBASIC2.09□□□□□ -2.07
TO15178 AL353997.1-201ENST00000432936 108 ntBASIC2.09□□□□□ -2.07
TO15178 AC236972.2-201ENST00000434979 310 ntBASIC2.09□□□□□ -2.07
TO15178 HMGN2P18-201ENST00000450680 270 ntBASIC2.09□□□□□ -2.07
TO15178 RPL30P15-201ENST00000457129 321 ntBASIC2.09□□□□□ -2.07
TO15178 RNA5SP233-201ENST00000459153 113 ntBASIC2.09□□□□□ -2.07
TO15178 RNU7-14P-201ENST00000459331 62 ntBASIC2.09□□□□□ -2.07
TO15178 RPL17P19-201ENST00000489069 552 ntBASIC2.09□□□□□ -2.07
TO15178 AC090255.1-201ENST00000495779 349 ntBASIC2.09□□□□□ -2.07
TO15178 RNU2-44P-201ENST00000516795 194 ntBASIC2.09□□□□□ -2.07
TO15178 RNU6-264P-201ENST00000517134 104 ntBASIC2.09□□□□□ -2.07
TO15178 RNA5SP490-201ENST00000517141 136 ntBASIC2.09□□□□□ -2.07
TO15178 SNRPGP18-201ENST00000553000 214 ntBASIC2.09□□□□□ -2.07
TO15178 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC2.09□□□□□ -2.07
TO15178 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.09□□□□□ -2.07
TO15178 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.09□□□□□ -2.07
TO15178 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC2.09□□□□□ -2.07
TO15178 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
TO15178 MTND4LP32-201ENST00000636111 270 ntBASIC2.09□□□□□ -2.07
TO15178 ZNF204P-201ENST00000416749 2397 ntBASIC2.08□□□□□ -2.08
TO15178 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.08□□□□□ -2.08
TO15178 AC008555.8-201ENST00000623602 2168 ntBASIC2.08□□□□□ -2.08
TO15178 RNU4-73P-201ENST00000363164 141 ntBASIC2.08□□□□□ -2.08
TO15178 SNORA40.19-201ENST00000390846 128 ntBASIC2.08□□□□□ -2.08
TO15178 Y_RNA.604-201ENST00000410574 102 ntBASIC2.08□□□□□ -2.08
TO15178 RNU6-1304P-201ENST00000411374 106 ntBASIC2.08□□□□□ -2.08
TO15178 AC022028.1-201ENST00000412054 408 ntBASIC2.08□□□□□ -2.08
TO15178 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.08□□□□□ -2.08
TO15178 MTCO3P29-201ENST00000432119 779 ntBASIC2.08□□□□□ -2.08
TO15178 AC004386.2-201ENST00000441858 148 ntBASIC2.08□□□□□ -2.08
TO15178 SNRPEP8-201ENST00000442866 260 ntBASIC2.08□□□□□ -2.08
TO15178 Y_RNA.632-201ENST00000459189 102 ntBASIC2.08□□□□□ -2.08
TO15178 TOMM22P6-201ENST00000465035 409 ntBASIC2.08□□□□□ -2.08
TO15178 AC093259.1-201ENST00000509755 300 ntBASIC2.08□□□□□ -2.08
TO15178 RNU6-991P-201ENST00000516168 107 ntBASIC2.08□□□□□ -2.08
TO15178 Y_RNA.718-201ENST00000517110 102 ntBASIC2.08□□□□□ -2.08
TO15178 RNU6-58P-201ENST00000517143 103 ntBASIC2.08□□□□□ -2.08
TO15178 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.08□□□□□ -2.08
TO15178 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.08□□□□□ -2.08
TO15178 ANP32BP3-201ENST00000559213 706 ntBASIC2.08□□□□□ -2.08
TO15178 AC233702.2-202ENST00000562547 291 ntBASIC2.08□□□□□ -2.08
TO15178 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC2.08□□□□□ -2.08
TO15178 MIR5006-201ENST00000583027 110 ntBASIC2.08□□□□□ -2.08
TO15178 AL590808.1-201ENST00000618696 141 ntBASIC2.08□□□□□ -2.08
TO15178 AC009831.4-201ENST00000620744 325 ntBASIC2.08□□□□□ -2.08
TO15178 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.08□□□□□ -2.08
TO15178 AL359697.1-201ENST00000624879 587 ntBASIC2.08□□□□□ -2.08
TO15178 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
TO15178 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.08□□□□□ -2.08
TO15178 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
TO15178 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
TO15178 Y_RNA.67-201ENST00000362870 100 ntBASIC2.07□□□□□ -2.08
TO15178 RNU5F-3P-201ENST00000363767 117 ntBASIC2.07□□□□□ -2.08
TO15178 RNA5SP37-201ENST00000365420 130 ntBASIC2.07□□□□□ -2.08
TO15178 RNU6-438P-201ENST00000365561 103 ntBASIC2.07□□□□□ -2.08
TO15178 RNU6-245P-201ENST00000384020 107 ntBASIC2.07□□□□□ -2.08
TO15178 RNU6-1026P-201ENST00000384465 108 ntBASIC2.07□□□□□ -2.08
TO15178 MIR487A-201ENST00000385009 80 ntBASIC2.07□□□□□ -2.08
TO15178 MIR676-201ENST00000390702 67 ntBASIC2.07□□□□□ -2.08
TO15178 RNY4P36-201ENST00000391116 96 ntBASIC2.07□□□□□ -2.08
TO15178 HMGN2P39-201ENST00000398005 273 ntBASIC2.07□□□□□ -2.08
TO15178 MIR190B-201ENST00000401119 79 ntBASIC2.07□□□□□ -2.08
TO15178 AL512604.1-201ENST00000404812 257 ntBASIC2.07□□□□□ -2.08
TO15178 RN7SKP284-201ENST00000411002 343 ntBASIC2.07□□□□□ -2.08
TO15178 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.07□□□□□ -2.08
TO15178 AC007098.1-201ENST00000420122 367 ntBASIC2.07□□□□□ -2.08
TO15178 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.07□□□□□ -2.08
TO15178 HMGN2P38-201ENST00000423806 265 ntBASIC2.07□□□□□ -2.08
TO15178 AL356320.1-201ENST00000429616 163 ntBASIC2.07□□□□□ -2.08
TO15178 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.07□□□□□ -2.08
TO15178 RNA5SP200-201ENST00000516360 103 ntBASIC2.07□□□□□ -2.08
TO15178 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.07□□□□□ -2.08
TO15178 RAB11AP2-201ENST00000545905 639 ntBASIC2.07□□□□□ -2.08
TO15178 AC027288.2-201ENST00000553028 243 ntBASIC2.07□□□□□ -2.08
TO15178 AL355802.3-201ENST00000607571 545 ntBASIC2.07□□□□□ -2.08
TO15178 AC022202.1-201ENST00000613515 211 ntBASIC2.07□□□□□ -2.08
TO15178 AC084781.2-201ENST00000615568 161 ntBASIC2.07□□□□□ -2.08
TO15178 ZNF720P1-201ENST00000562403 1939 ntBASIC2.07□□□□□ -2.08
TO15178 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
TO15178 MTND5P6-201ENST00000422338 1798 ntBASIC2.06□□□□□ -2.08
TO15178 Y_RNA.99-201ENST00000363138 105 ntBASIC2.06□□□□□ -2.08
TO15178 RNU6-280P-201ENST00000364145 104 ntBASIC2.06□□□□□ -2.08
TO15178 SNORD31B-201ENST00000364977 69 ntBASIC2.06□□□□□ -2.08
TO15178 SNORD116-29-201ENST00000384516 83 ntBASIC2.06□□□□□ -2.08
TO15178 MIR29C-201ENST00000385231 88 ntBASIC2.06□□□□□ -2.08
TO15178 SNORA48.3-201ENST00000391081 134 ntBASIC2.06□□□□□ -2.08
TO15178 AL135786.1-201ENST00000415892 214 ntBASIC2.06□□□□□ -2.08
TO15178 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.06□□□□□ -2.08
TO15178 AC009237.7-201ENST00000447357 229 ntBASIC2.06□□□□□ -2.08
TO15178 MTCO3P8-201ENST00000453691 755 ntBASIC2.06□□□□□ -2.08
TO15178 MTCO3P10-201ENST00000455912 772 ntBASIC2.06□□□□□ -2.08
TO15178 ELOCP24-201ENST00000456370 334 ntBASIC2.06□□□□□ -2.08
TO15178 SNORD19B-201ENST00000459623 84 ntBASIC2.06□□□□□ -2.08
TO15178 ATP5EP1-201ENST00000510257 156 ntBASIC2.06□□□□□ -2.08
TO15178 RPL23AP94-201ENST00000512518 302 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 125.3 ms