Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
ATP2A1O14983 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
ATP2A1O14983 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
ATP2A1O14983 SNORA12-201ENST00000391162 147 ntBASIC2.29□□□□□ -2.04
ATP2A1O14983 MTCYBP4-201ENST00000401524 249 ntBASIC2.29□□□□□ -2.04
ATP2A1O14983 RNU2-32P-201ENST00000411193 191 ntBASIC2.29□□□□□ -2.04
ATP2A1O14983 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC2.29□□□□□ -2.04
ATP2A1O14983 WARS2P1-201ENST00000429678 537 ntBASIC2.29□□□□□ -2.04
ATP2A1O14983 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.29□□□□□ -2.04
ATP2A1O14983 AC009238.1-201ENST00000442165 424 ntBASIC2.29□□□□□ -2.04
ATP2A1O14983 AC009237.6-201ENST00000446969 424 ntBASIC2.29□□□□□ -2.04
ATP2A1O14983 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.29□□□□□ -2.04
ATP2A1O14983 RN7SKP210-201ENST00000459176 261 ntBASIC2.29□□□□□ -2.04
ATP2A1O14983 AC018868.1-201ENST00000491307 315 ntBASIC2.29□□□□□ -2.04
ATP2A1O14983 RNA5SP384-201ENST00000516615 116 ntBASIC2.29□□□□□ -2.04
ATP2A1O14983 IGLV3-17-201ENST00000519099 244 ntBASIC2.29□□□□□ -2.04
ATP2A1O14983 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.29□□□□□ -2.04
ATP2A1O14983 AL590705.4-201ENST00000532209 134 ntBASIC2.29□□□□□ -2.04
ATP2A1O14983 AL117336.2-201ENST00000602435 335 ntBASIC2.29□□□□□ -2.04
ATP2A1O14983 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
ATP2A1O14983 SNORA25B-201ENST00000365507 128 ntBASIC2.28□□□□□ -2.04
ATP2A1O14983 SNORA6-201ENST00000384033 151 ntBASIC2.28□□□□□ -2.04
ATP2A1O14983 RNU6-1093P-201ENST00000391194 107 ntBASIC2.28□□□□□ -2.04
ATP2A1O14983 MIR1294-201ENST00000408503 142 ntBASIC2.28□□□□□ -2.04
ATP2A1O14983 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.28□□□□□ -2.04
ATP2A1O14983 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.28□□□□□ -2.04
ATP2A1O14983 snoU13.30-201ENST00000458951 104 ntBASIC2.28□□□□□ -2.04
ATP2A1O14983 AC132942.1-201ENST00000486753 483 ntBASIC2.28□□□□□ -2.04
ATP2A1O14983 RPL30P10-201ENST00000488148 337 ntBASIC2.28□□□□□ -2.04
ATP2A1O14983 AC090255.1-201ENST00000495779 349 ntBASIC2.28□□□□□ -2.04
ATP2A1O14983 RNU6-1213P-201ENST00000517075 94 ntBASIC2.28□□□□□ -2.04
ATP2A1O14983 RNU6-548P-201ENST00000517083 115 ntBASIC2.28□□□□□ -2.04
ATP2A1O14983 RAB11AP2-201ENST00000545905 639 ntBASIC2.28□□□□□ -2.04
ATP2A1O14983 AC093027.1-201ENST00000546698 429 ntBASIC2.28□□□□□ -2.04
ATP2A1O14983 MIR5089-201ENST00000580047 84 ntBASIC2.28□□□□□ -2.04
ATP2A1O14983 AC010928.2-201ENST00000588017 287 ntBASIC2.28□□□□□ -2.04
ATP2A1O14983 AC005014.2-201ENST00000607795 599 ntBASIC2.28□□□□□ -2.04
ATP2A1O14983 RMST_6.1-201ENST00000611980 203 ntBASIC2.28□□□□□ -2.04
ATP2A1O14983 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.28□□□□□ -2.04
ATP2A1O14983 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
ATP2A1O14983 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
ATP2A1O14983 Y_RNA.48-201ENST00000362710 103 ntBASIC2.27□□□□□ -2.05
ATP2A1O14983 RNU4-73P-201ENST00000363164 141 ntBASIC2.27□□□□□ -2.05
ATP2A1O14983 U8.10-201ENST00000384260 133 ntBASIC2.27□□□□□ -2.05
ATP2A1O14983 RNU6-310P-201ENST00000384655 107 ntBASIC2.27□□□□□ -2.05
ATP2A1O14983 RNY4P36-201ENST00000391116 96 ntBASIC2.27□□□□□ -2.05
ATP2A1O14983 AL355497.1-201ENST00000406262 551 ntBASIC2.27□□□□□ -2.05
ATP2A1O14983 Y_RNA.646-201ENST00000410980 101 ntBASIC2.27□□□□□ -2.05
ATP2A1O14983 AC027124.2-201ENST00000428249 105 ntBASIC2.27□□□□□ -2.05
ATP2A1O14983 Z82188.1-201ENST00000436709 154 ntBASIC2.27□□□□□ -2.05
ATP2A1O14983 Y_RNA.632-201ENST00000459189 102 ntBASIC2.27□□□□□ -2.05
ATP2A1O14983 AC097473.1-201ENST00000508142 408 ntBASIC2.27□□□□□ -2.05
ATP2A1O14983 SCARNA16.2-201ENST00000516520 172 ntBASIC2.27□□□□□ -2.05
ATP2A1O14983 RNU7-193P-201ENST00000516723 65 ntBASIC2.27□□□□□ -2.05
ATP2A1O14983 RNU1-40P-201ENST00000516816 164 ntBASIC2.27□□□□□ -2.05
ATP2A1O14983 RNU1-97P-201ENST00000516872 164 ntBASIC2.27□□□□□ -2.05
ATP2A1O14983 AC121758.2-201ENST00000553271 193 ntBASIC2.27□□□□□ -2.05
ATP2A1O14983 AC110588.1-201ENST00000559699 137 ntBASIC2.27□□□□□ -2.05
ATP2A1O14983 RPL17P51-201ENST00000605218 238 ntBASIC2.27□□□□□ -2.05
ATP2A1O14983 AC133104.2-201ENST00000615272 193 ntBASIC2.27□□□□□ -2.05
ATP2A1O14983 AL353997.5-201ENST00000618886 171 ntBASIC2.27□□□□□ -2.05
ATP2A1O14983 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.27□□□□□ -2.05
ATP2A1O14983 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC2.27□□□□□ -2.05
ATP2A1O14983 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
ATP2A1O14983 Y_RNA.259-201ENST00000364619 101 ntBASIC2.26□□□□□ -2.05
ATP2A1O14983 RNU6-26P-201ENST00000383985 107 ntBASIC2.26□□□□□ -2.05
ATP2A1O14983 SNORD116-29-201ENST00000384516 83 ntBASIC2.26□□□□□ -2.05
ATP2A1O14983 RNU6-331P-201ENST00000384724 107 ntBASIC2.26□□□□□ -2.05
ATP2A1O14983 MIR583-201ENST00000384846 75 ntBASIC2.26□□□□□ -2.05
ATP2A1O14983 MIR153-2-201ENST00000385225 87 ntBASIC2.26□□□□□ -2.05
ATP2A1O14983 RNU2-48P-201ENST00000410694 191 ntBASIC2.26□□□□□ -2.05
ATP2A1O14983 CYCSP49-201ENST00000420810 319 ntBASIC2.26□□□□□ -2.05
ATP2A1O14983 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC2.26□□□□□ -2.05
ATP2A1O14983 IPO7P1-201ENST00000442031 636 ntBASIC2.26□□□□□ -2.05
ATP2A1O14983 Y_RNA.653-201ENST00000459091 95 ntBASIC2.26□□□□□ -2.05
ATP2A1O14983 AC068781.1-201ENST00000488231 618 ntBASIC2.26□□□□□ -2.05
ATP2A1O14983 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.26□□□□□ -2.05
ATP2A1O14983 RNU7-175P-201ENST00000515915 61 ntBASIC2.26□□□□□ -2.05
ATP2A1O14983 AC034114.1-201ENST00000520293 285 ntBASIC2.26□□□□□ -2.05
ATP2A1O14983 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC2.26□□□□□ -2.05
ATP2A1O14983 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.26□□□□□ -2.05
ATP2A1O14983 AC104581.2-201ENST00000572227 430 ntBASIC2.26□□□□□ -2.05
ATP2A1O14983 MIR5701-3-201ENST00000578890 82 ntBASIC2.26□□□□□ -2.05
ATP2A1O14983 MIR5701-1-201ENST00000585138 82 ntBASIC2.26□□□□□ -2.05
ATP2A1O14983 MIR6840-201ENST00000611937 71 ntBASIC2.26□□□□□ -2.05
ATP2A1O14983 MIR5701-2-201ENST00000615634 82 ntBASIC2.26□□□□□ -2.05
ATP2A1O14983 AL132822.1-201ENST00000617063 513 ntBASIC2.26□□□□□ -2.05
ATP2A1O14983 AL359697.1-201ENST00000624879 587 ntBASIC2.26□□□□□ -2.05
ATP2A1O14983 MTND4LP32-201ENST00000636111 270 ntBASIC2.26□□□□□ -2.05
ATP2A1O14983 MTND4P1-201ENST00000457501 1466 ntBASIC2.26□□□□□ -2.05
ATP2A1O14983 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.26□□□□□ -2.05
ATP2A1O14983 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
ATP2A1O14983 RNY1P16-201ENST00000363063 111 ntBASIC2.25□□□□□ -2.05
ATP2A1O14983 SNORD115-8-201ENST00000363856 82 ntBASIC2.25□□□□□ -2.05
ATP2A1O14983 RNA5SP99-201ENST00000364020 114 ntBASIC2.25□□□□□ -2.05
ATP2A1O14983 SNORD115-38-201ENST00000365037 82 ntBASIC2.25□□□□□ -2.05
ATP2A1O14983 RNU6-17P-201ENST00000384245 107 ntBASIC2.25□□□□□ -2.05
ATP2A1O14983 RNU6-611P-201ENST00000384276 104 ntBASIC2.25□□□□□ -2.05
ATP2A1O14983 RNU1-148P-201ENST00000384472 162 ntBASIC2.25□□□□□ -2.05
ATP2A1O14983 RNU6-18P-201ENST00000384527 107 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms