Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 Y_RNA.167-201ENST00000363735 109 ntBASIC1.75□□□□□ -2.13
CUX2O14529 RNU4-38P-201ENST00000364472 129 ntBASIC1.75□□□□□ -2.13
CUX2O14529 RNA5SP219-201ENST00000390940 113 ntBASIC1.75□□□□□ -2.13
CUX2O14529 RNU11-5P-201ENST00000391216 129 ntBASIC1.75□□□□□ -2.13
CUX2O14529 RN7SKP61-201ENST00000410642 295 ntBASIC1.75□□□□□ -2.13
CUX2O14529 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.75□□□□□ -2.13
CUX2O14529 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.75□□□□□ -2.13
CUX2O14529 AL117339.3-201ENST00000418733 162 ntBASIC1.75□□□□□ -2.13
CUX2O14529 AL353193.1-201ENST00000421444 268 ntBASIC1.75□□□□□ -2.13
CUX2O14529 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.75□□□□□ -2.13
CUX2O14529 MTCO2P3-201ENST00000442543 421 ntBASIC1.75□□□□□ -2.13
CUX2O14529 MTCO2P18-201ENST00000457151 658 ntBASIC1.75□□□□□ -2.13
CUX2O14529 SNORA14.1-201ENST00000516113 141 ntBASIC1.75□□□□□ -2.13
CUX2O14529 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.75□□□□□ -2.13
CUX2O14529 MIR3611-201ENST00000584484 83 ntBASIC1.75□□□□□ -2.13
CUX2O14529 AL512605.2-201ENST00000592972 256 ntBASIC1.75□□□□□ -2.13
CUX2O14529 PCGEM1.1-201ENST00000613431 131 ntBASIC1.75□□□□□ -2.13
CUX2O14529 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC1.75□□□□□ -2.13
CUX2O14529 AL158209.2-201ENST00000619266 216 ntBASIC1.75□□□□□ -2.13
CUX2O14529 U3.9-201ENST00000363823 204 ntBASIC1.75□□□□□ -2.13
CUX2O14529 SNORD32A-201ENST00000364805 84 ntBASIC1.75□□□□□ -2.13
CUX2O14529 Y_RNA.303-201ENST00000364998 94 ntBASIC1.75□□□□□ -2.13
CUX2O14529 SNORD116-1-201ENST00000384335 95 ntBASIC1.75□□□□□ -2.13
CUX2O14529 RNU6-160P-201ENST00000384591 107 ntBASIC1.75□□□□□ -2.13
CUX2O14529 UBE2V1P4-201ENST00000425374 344 ntBASIC1.75□□□□□ -2.13
CUX2O14529 SNAP23P1-201ENST00000433229 246 ntBASIC1.75□□□□□ -2.13
CUX2O14529 RNU7-138P-201ENST00000459479 64 ntBASIC1.75□□□□□ -2.13
CUX2O14529 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.75□□□□□ -2.13
CUX2O14529 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.75□□□□□ -2.13
CUX2O14529 MTND1P15-201ENST00000579262 949 ntBASIC1.75□□□□□ -2.13
CUX2O14529 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.75□□□□□ -2.13
CUX2O14529 AP001836.1-201ENST00000604675 523 ntBASIC1.75□□□□□ -2.13
CUX2O14529 AP001596.2-201ENST00000608410 312 ntBASIC1.75□□□□□ -2.13
CUX2O14529 RNU6-82P-201ENST00000363970 107 ntBASIC1.74□□□□□ -2.13
CUX2O14529 SNORD114-6-201ENST00000364393 72 ntBASIC1.74□□□□□ -2.13
CUX2O14529 SNORD32B-201ENST00000364460 84 ntBASIC1.74□□□□□ -2.13
CUX2O14529 MTCYBP2-201ENST00000407745 171 ntBASIC1.74□□□□□ -2.13
CUX2O14529 RNA5SP193-201ENST00000410353 107 ntBASIC1.74□□□□□ -2.13
CUX2O14529 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.74□□□□□ -2.13
CUX2O14529 MTCO3P41-201ENST00000414801 328 ntBASIC1.74□□□□□ -2.13
CUX2O14529 AL591704.2-201ENST00000421658 181 ntBASIC1.74□□□□□ -2.13
CUX2O14529 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.74□□□□□ -2.13
CUX2O14529 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.74□□□□□ -2.13
CUX2O14529 RPL9P9-202ENST00000466501 579 ntBASIC1.74□□□□□ -2.13
CUX2O14529 AC096745.1-201ENST00000509945 370 ntBASIC1.74□□□□□ -2.13
CUX2O14529 AC005741.1-201ENST00000511094 432 ntBASIC1.74□□□□□ -2.13
CUX2O14529 RNU6-567P-201ENST00000516746 107 ntBASIC1.74□□□□□ -2.13
CUX2O14529 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC1.74□□□□□ -2.13
CUX2O14529 HSBP1P1-201ENST00000555205 166 ntBASIC1.74□□□□□ -2.13
CUX2O14529 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.74□□□□□ -2.13
CUX2O14529 BNIP3P25-201ENST00000596023 559 ntBASIC1.74□□□□□ -2.13
CUX2O14529 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.74□□□□□ -2.13
CUX2O14529 MIR6863-201ENST00000636112 90 ntBASIC1.74□□□□□ -2.13
CUX2O14529 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
CUX2O14529 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.73□□□□□ -2.13
CUX2O14529 RNU1-62P-201ENST00000362599 164 ntBASIC1.73□□□□□ -2.13
CUX2O14529 RNA5SP493-201ENST00000364115 91 ntBASIC1.73□□□□□ -2.13
CUX2O14529 RNU6-1322P-201ENST00000364309 107 ntBASIC1.73□□□□□ -2.13
CUX2O14529 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
CUX2O14529 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.73□□□□□ -2.13
CUX2O14529 Y_RNA.409-201ENST00000383990 98 ntBASIC1.73□□□□□ -2.13
CUX2O14529 RNU6-17P-201ENST00000384245 107 ntBASIC1.73□□□□□ -2.13
CUX2O14529 RNU6-378P-201ENST00000384324 107 ntBASIC1.73□□□□□ -2.13
CUX2O14529 RNU6-18P-201ENST00000384527 107 ntBASIC1.73□□□□□ -2.13
CUX2O14529 MIR597-201ENST00000384968 97 ntBASIC1.73□□□□□ -2.13
CUX2O14529 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
CUX2O14529 RNA5SP501-201ENST00000410990 112 ntBASIC1.73□□□□□ -2.13
CUX2O14529 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC1.73□□□□□ -2.13
CUX2O14529 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.73□□□□□ -2.13
CUX2O14529 AC004941.2-201ENST00000427009 228 ntBASIC1.73□□□□□ -2.13
CUX2O14529 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC1.73□□□□□ -2.13
CUX2O14529 RPS23P5-201ENST00000495419 428 ntBASIC1.73□□□□□ -2.13
CUX2O14529 AC091885.1-201ENST00000506658 268 ntBASIC1.73□□□□□ -2.13
CUX2O14529 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.73□□□□□ -2.13
CUX2O14529 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.73□□□□□ -2.13
CUX2O14529 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.73□□□□□ -2.13
CUX2O14529 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.73□□□□□ -2.13
CUX2O14529 CYP4A27P-201ENST00000567218 190 ntBASIC1.73□□□□□ -2.13
CUX2O14529 MIR4711-201ENST00000578274 70 ntBASIC1.73□□□□□ -2.13
CUX2O14529 MIR5583-1-201ENST00000580941 59 ntBASIC1.73□□□□□ -2.13
CUX2O14529 AC078795.3-201ENST00000602913 472 ntBASIC1.73□□□□□ -2.13
CUX2O14529 AC124864.2-201ENST00000624736 186 ntBASIC1.73□□□□□ -2.13
CUX2O14529 AC009541.1-201ENST00000438279 2662 ntBASIC1.73□□□□□ -2.13
CUX2O14529 RNU6-259P-201ENST00000383999 107 ntBASIC1.72□□□□□ -2.13
CUX2O14529 SNORA8-201ENST00000384574 139 ntBASIC1.72□□□□□ -2.13
CUX2O14529 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.72□□□□□ -2.13
CUX2O14529 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.72□□□□□ -2.13
CUX2O14529 AC087884.1-201ENST00000469738 328 ntBASIC1.72□□□□□ -2.13
CUX2O14529 RNU6-189P-201ENST00000516120 101 ntBASIC1.72□□□□□ -2.13
CUX2O14529 RNU6-1038P-201ENST00000516516 104 ntBASIC1.72□□□□□ -2.13
CUX2O14529 RNU5F-4P-201ENST00000516581 114 ntBASIC1.72□□□□□ -2.13
CUX2O14529 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.72□□□□□ -2.13
CUX2O14529 EIF4A1P12-201ENST00000551910 141 ntBASIC1.72□□□□□ -2.13
CUX2O14529 AC090115.3-201ENST00000553218 849 ntBASIC1.72□□□□□ -2.13
CUX2O14529 AC021231.3-201ENST00000558497 370 ntBASIC1.72□□□□□ -2.13
CUX2O14529 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.72□□□□□ -2.13
CUX2O14529 SNORD114-21-201ENST00000606412 72 ntBASIC1.72□□□□□ -2.13
CUX2O14529 Z99129.1-201ENST00000612510 255 ntBASIC1.72□□□□□ -2.13
CUX2O14529 AC073534.2-201ENST00000620377 381 ntBASIC1.72□□□□□ -2.13
CUX2O14529 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms