Protein–RNA interactions for Protein: O00716

E2F3, Transcription factor E2F3, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E2F3O00716 RNA5SP57-201ENST00000459463 123 ntBASIC1.87□□□□□ -2.11
E2F3O00716 HMGN1P12-201ENST00000499125 195 ntBASIC1.87□□□□□ -2.11
E2F3O00716 AC103851.1-201ENST00000506833 274 ntBASIC1.87□□□□□ -2.11
E2F3O00716 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.87□□□□□ -2.11
E2F3O00716 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.87□□□□□ -2.11
E2F3O00716 AC021231.3-201ENST00000558497 370 ntBASIC1.87□□□□□ -2.11
E2F3O00716 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.87□□□□□ -2.11
E2F3O00716 MIR3923-201ENST00000579521 83 ntBASIC1.87□□□□□ -2.11
E2F3O00716 AC078795.3-201ENST00000602913 472 ntBASIC1.87□□□□□ -2.11
E2F3O00716 uc_338.5-201ENST00000611839 155 ntBASIC1.87□□□□□ -2.11
E2F3O00716 AC022306.2-201ENST00000617563 647 ntBASIC1.87□□□□□ -2.11
E2F3O00716 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
E2F3O00716 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
E2F3O00716 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
E2F3O00716 SNORA36A-201ENST00000384221 132 ntBASIC1.86□□□□□ -2.11
E2F3O00716 MIR583-201ENST00000384846 75 ntBASIC1.86□□□□□ -2.11
E2F3O00716 RNA5SP212-201ENST00000391223 107 ntBASIC1.86□□□□□ -2.11
E2F3O00716 RPS3AP52-201ENST00000435639 297 ntBASIC1.86□□□□□ -2.11
E2F3O00716 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.86□□□□□ -2.11
E2F3O00716 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.86□□□□□ -2.11
E2F3O00716 AC145146.1-201ENST00000496370 254 ntBASIC1.86□□□□□ -2.11
E2F3O00716 MTND5P5-201ENST00000503764 376 ntBASIC1.86□□□□□ -2.11
E2F3O00716 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.86□□□□□ -2.11
E2F3O00716 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.86□□□□□ -2.11
E2F3O00716 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
E2F3O00716 AL121579.1-201ENST00000555129 305 ntBASIC1.86□□□□□ -2.11
E2F3O00716 MIR548S-201ENST00000581352 82 ntBASIC1.86□□□□□ -2.11
E2F3O00716 MIR4273-201ENST00000582824 84 ntBASIC1.86□□□□□ -2.11
E2F3O00716 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.86□□□□□ -2.11
E2F3O00716 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.86□□□□□ -2.11
E2F3O00716 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
E2F3O00716 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.86□□□□□ -2.11
E2F3O00716 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.86□□□□□ -2.11
E2F3O00716 RNU4-15P-201ENST00000362613 141 ntBASIC1.85□□□□□ -2.11
E2F3O00716 RNU6-1164P-201ENST00000364428 107 ntBASIC1.85□□□□□ -2.11
E2F3O00716 SNORD81.2-201ENST00000365153 76 ntBASIC1.85□□□□□ -2.11
E2F3O00716 RNU6-968P-201ENST00000384076 107 ntBASIC1.85□□□□□ -2.11
E2F3O00716 MIR597-201ENST00000384968 97 ntBASIC1.85□□□□□ -2.11
E2F3O00716 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
E2F3O00716 MIR548K-201ENST00000408406 116 ntBASIC1.85□□□□□ -2.11
E2F3O00716 PDCL2P1-201ENST00000419302 352 ntBASIC1.85□□□□□ -2.11
E2F3O00716 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.85□□□□□ -2.11
E2F3O00716 DAP3P1-201ENST00000441522 278 ntBASIC1.85□□□□□ -2.11
E2F3O00716 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.85□□□□□ -2.11
E2F3O00716 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.85□□□□□ -2.11
E2F3O00716 RNA5SP182-201ENST00000516064 82 ntBASIC1.85□□□□□ -2.11
E2F3O00716 RNU6-567P-201ENST00000516746 107 ntBASIC1.85□□□□□ -2.11
E2F3O00716 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.85□□□□□ -2.11
E2F3O00716 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.85□□□□□ -2.11
E2F3O00716 MRPS36P4-201ENST00000534436 298 ntBASIC1.85□□□□□ -2.11
E2F3O00716 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.85□□□□□ -2.11
E2F3O00716 FGF7P1-201ENST00000582820 288 ntBASIC1.85□□□□□ -2.11
E2F3O00716 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.85□□□□□ -2.11
E2F3O00716 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.85□□□□□ -2.11
E2F3O00716 AL355073.2-201ENST00000612106 557 ntBASIC1.85□□□□□ -2.11
E2F3O00716 SNORA43.4-201ENST00000629559 138 ntBASIC1.85□□□□□ -2.11
E2F3O00716 TPTEP1-208ENST00000636884 213 ntBASIC1.85□□□□□ -2.11
E2F3O00716 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
E2F3O00716 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
E2F3O00716 AC233981.2-201ENST00000611524 1614 ntBASIC1.84□□□□□ -2.11
E2F3O00716 RNU1-58P-201ENST00000362413 163 ntBASIC1.84□□□□□ -2.11
E2F3O00716 Y_RNA.88-201ENST00000363029 99 ntBASIC1.84□□□□□ -2.11
E2F3O00716 Y_RNA.166-201ENST00000363730 102 ntBASIC1.84□□□□□ -2.11
E2F3O00716 Y_RNA.184-201ENST00000363884 108 ntBASIC1.84□□□□□ -2.11
E2F3O00716 SNORA29-201ENST00000384183 140 ntBASIC1.84□□□□□ -2.11
E2F3O00716 RNU6-784P-201ENST00000384330 106 ntBASIC1.84□□□□□ -2.11
E2F3O00716 RNU2-20P-201ENST00000410425 191 ntBASIC1.84□□□□□ -2.11
E2F3O00716 RNA5SP494-201ENST00000410653 129 ntBASIC1.84□□□□□ -2.11
E2F3O00716 RPL37P10-201ENST00000412884 288 ntBASIC1.84□□□□□ -2.11
E2F3O00716 EIF4EP2-201ENST00000422816 654 ntBASIC1.84□□□□□ -2.11
E2F3O00716 AC012306.1-201ENST00000423267 114 ntBASIC1.84□□□□□ -2.11
E2F3O00716 CBX3P6-201ENST00000430257 527 ntBASIC1.84□□□□□ -2.11
E2F3O00716 USP9YP30-201ENST00000430729 455 ntBASIC1.84□□□□□ -2.11
E2F3O00716 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.84□□□□□ -2.11
E2F3O00716 AC021146.2-201ENST00000504736 556 ntBASIC1.84□□□□□ -2.11
E2F3O00716 HSBP1P1-201ENST00000555205 166 ntBASIC1.84□□□□□ -2.11
E2F3O00716 AC109446.1-201ENST00000566172 220 ntBASIC1.84□□□□□ -2.11
E2F3O00716 MIR4713-201ENST00000582691 75 ntBASIC1.84□□□□□ -2.11
E2F3O00716 UBE2V2P2-201ENST00000587677 504 ntBASIC1.84□□□□□ -2.11
E2F3O00716 Z98751.3-201ENST00000604447 521 ntBASIC1.84□□□□□ -2.11
E2F3O00716 WT1-AS_8.1-201ENST00000615200 275 ntBASIC1.84□□□□□ -2.11
E2F3O00716 U1.36-201ENST00000620684 176 ntBASIC1.84□□□□□ -2.11
E2F3O00716 MIR1248-201ENST00000629190 106 ntBASIC1.84□□□□□ -2.11
E2F3O00716 Y_RNA.303-201ENST00000364998 94 ntBASIC1.83□□□□□ -2.12
E2F3O00716 RNU6-1286P-201ENST00000383871 107 ntBASIC1.83□□□□□ -2.12
E2F3O00716 MIR208B-201ENST00000401172 77 ntBASIC1.83□□□□□ -2.12
E2F3O00716 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.83□□□□□ -2.12
E2F3O00716 RN7SKP210-201ENST00000459176 261 ntBASIC1.83□□□□□ -2.12
E2F3O00716 FO393415.2-201ENST00000480085 343 ntBASIC1.83□□□□□ -2.12
E2F3O00716 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.83□□□□□ -2.12
E2F3O00716 AC110588.1-201ENST00000559699 137 ntBASIC1.83□□□□□ -2.12
E2F3O00716 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.83□□□□□ -2.12
E2F3O00716 CYP4A27P-201ENST00000567218 190 ntBASIC1.83□□□□□ -2.12
E2F3O00716 CYP2C61P-201ENST00000604072 290 ntBASIC1.83□□□□□ -2.12
E2F3O00716 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.83□□□□□ -2.12
E2F3O00716 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.83□□□□□ -2.12
E2F3O00716 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.83□□□□□ -2.12
E2F3O00716 AL450472.1-202ENST00000637286 180 ntBASIC1.83□□□□□ -2.12
E2F3O00716 MTND4P12-201ENST00000498999 1377 ntBASIC1.83□□□□□ -2.12
E2F3O00716 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms