Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.93□□□□□ -1.94
TRIM38O00635 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
TRIM38O00635 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
TRIM38O00635 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
TRIM38O00635 RNU6-1266P-201ENST00000362794 105 ntBASIC2.92□□□□□ -1.94
TRIM38O00635 RNU1-76P-201ENST00000362903 159 ntBASIC2.92□□□□□ -1.94
TRIM38O00635 RNU6-1285P-201ENST00000363480 105 ntBASIC2.92□□□□□ -1.94
TRIM38O00635 RNU6-1210P-201ENST00000363775 107 ntBASIC2.92□□□□□ -1.94
TRIM38O00635 RNU6-1317P-201ENST00000364582 104 ntBASIC2.92□□□□□ -1.94
TRIM38O00635 RNU6-301P-201ENST00000384277 107 ntBASIC2.92□□□□□ -1.94
TRIM38O00635 SNORA69.1-201ENST00000390904 137 ntBASIC2.92□□□□□ -1.94
TRIM38O00635 MIR1298-201ENST00000408783 112 ntBASIC2.92□□□□□ -1.94
TRIM38O00635 EEF1B2P7-201ENST00000451177 676 ntBASIC2.92□□□□□ -1.94
TRIM38O00635 Y_RNA.644-201ENST00000459006 113 ntBASIC2.92□□□□□ -1.94
TRIM38O00635 RPS29P27-201ENST00000463711 170 ntBASIC2.92□□□□□ -1.94
TRIM38O00635 RPL23AP70-201ENST00000483361 460 ntBASIC2.92□□□□□ -1.94
TRIM38O00635 AC010469.2-201ENST00000496412 480 ntBASIC2.92□□□□□ -1.94
TRIM38O00635 AC083906.5-201ENST00000503722 328 ntBASIC2.92□□□□□ -1.94
TRIM38O00635 AC107393.1-201ENST00000512403 346 ntBASIC2.92□□□□□ -1.94
TRIM38O00635 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.92□□□□□ -1.94
TRIM38O00635 SCGB1D5P-201ENST00000515134 247 ntBASIC2.92□□□□□ -1.94
TRIM38O00635 Y_RNA.674-201ENST00000516362 113 ntBASIC2.92□□□□□ -1.94
TRIM38O00635 RNU6-56P-201ENST00000516986 93 ntBASIC2.92□□□□□ -1.94
TRIM38O00635 Y_RNA.713-201ENST00000517013 96 ntBASIC2.92□□□□□ -1.94
TRIM38O00635 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.92□□□□□ -1.94
TRIM38O00635 MIR3162-201ENST00000581818 82 ntBASIC2.92□□□□□ -1.94
TRIM38O00635 MIR8076-201ENST00000611401 83 ntBASIC2.92□□□□□ -1.94
TRIM38O00635 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
TRIM38O00635 AC073325.2-201ENST00000339545 159 ntBASIC2.91□□□□□ -1.94
TRIM38O00635 RNU6-655P-201ENST00000362858 107 ntBASIC2.91□□□□□ -1.94
TRIM38O00635 SNORA18.3-201ENST00000384122 132 ntBASIC2.91□□□□□ -1.94
TRIM38O00635 RNU6-851P-201ENST00000384565 107 ntBASIC2.91□□□□□ -1.94
TRIM38O00635 SNORD115-46-201ENST00000390982 71 ntBASIC2.91□□□□□ -1.94
TRIM38O00635 BTF3L4P2-201ENST00000392798 346 ntBASIC2.91□□□□□ -1.94
TRIM38O00635 AL591034.2-201ENST00000402839 359 ntBASIC2.91□□□□□ -1.94
TRIM38O00635 Y_RNA.793-201ENST00000411222 111 ntBASIC2.91□□□□□ -1.94
TRIM38O00635 AC096920.1-201ENST00000423991 241 ntBASIC2.91□□□□□ -1.94
TRIM38O00635 AC078809.1-201ENST00000427601 140 ntBASIC2.91□□□□□ -1.94
TRIM38O00635 EIF1P2-201ENST00000428233 350 ntBASIC2.91□□□□□ -1.94
TRIM38O00635 MTCO3P29-201ENST00000432119 779 ntBASIC2.91□□□□□ -1.94
TRIM38O00635 AC105272.1-201ENST00000438604 198 ntBASIC2.91□□□□□ -1.94
TRIM38O00635 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
TRIM38O00635 RPL30P12-201ENST00000474666 353 ntBASIC2.91□□□□□ -1.94
TRIM38O00635 AL121594.1-201ENST00000475906 575 ntBASIC2.91□□□□□ -1.94
TRIM38O00635 AC074198.2-201ENST00000508153 258 ntBASIC2.91□□□□□ -1.94
TRIM38O00635 RNU6-1338P-201ENST00000516328 91 ntBASIC2.91□□□□□ -1.94
TRIM38O00635 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.91□□□□□ -1.94
TRIM38O00635 AC016256.1-201ENST00000547971 354 ntBASIC2.91□□□□□ -1.94
TRIM38O00635 MIR4319-201ENST00000577285 85 ntBASIC2.91□□□□□ -1.94
TRIM38O00635 MIR6733-201ENST00000635723 61 ntBASIC2.91□□□□□ -1.94
TRIM38O00635 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.9□□□□□ -1.94
TRIM38O00635 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
TRIM38O00635 AC092268.1-201ENST00000342691 405 ntBASIC2.9□□□□□ -1.95
TRIM38O00635 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
TRIM38O00635 Y_RNA.83-201ENST00000363005 113 ntBASIC2.9□□□□□ -1.95
TRIM38O00635 RNU6-682P-201ENST00000363843 106 ntBASIC2.9□□□□□ -1.95
TRIM38O00635 RNU6-595P-201ENST00000363944 107 ntBASIC2.9□□□□□ -1.95
TRIM38O00635 SNORA26.3-201ENST00000391119 136 ntBASIC2.9□□□□□ -1.95
TRIM38O00635 FO393413.1-201ENST00000402892 195 ntBASIC2.9□□□□□ -1.95
TRIM38O00635 MRPL35P1-201ENST00000404272 572 ntBASIC2.9□□□□□ -1.95
TRIM38O00635 AL590004.2-201ENST00000404787 371 ntBASIC2.9□□□□□ -1.95
TRIM38O00635 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.9□□□□□ -1.95
TRIM38O00635 EIF1AXP1-201ENST00000419267 435 ntBASIC2.9□□□□□ -1.95
TRIM38O00635 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.9□□□□□ -1.95
TRIM38O00635 MTND3P9-201ENST00000429526 346 ntBASIC2.9□□□□□ -1.95
TRIM38O00635 RPS29P6-201ENST00000438196 145 ntBASIC2.9□□□□□ -1.95
TRIM38O00635 TMSB4XP3-201ENST00000445144 114 ntBASIC2.9□□□□□ -1.95
TRIM38O00635 UBBP3-201ENST00000445497 241 ntBASIC2.9□□□□□ -1.95
TRIM38O00635 AC108938.1-201ENST00000451204 136 ntBASIC2.9□□□□□ -1.95
TRIM38O00635 RNU7-120P-201ENST00000459334 63 ntBASIC2.9□□□□□ -1.95
TRIM38O00635 AC016632.1-201ENST00000503994 196 ntBASIC2.9□□□□□ -1.95
TRIM38O00635 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.9□□□□□ -1.95
TRIM38O00635 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.9□□□□□ -1.95
TRIM38O00635 MIR5696-201ENST00000578474 85 ntBASIC2.9□□□□□ -1.95
TRIM38O00635 MIR4300-201ENST00000581016 96 ntBASIC2.9□□□□□ -1.95
TRIM38O00635 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.9□□□□□ -1.95
TRIM38O00635 MIR3117-201ENST00000584034 78 ntBASIC2.9□□□□□ -1.95
TRIM38O00635 BX284668.6-201ENST00000606899 438 ntBASIC2.9□□□□□ -1.95
TRIM38O00635 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
TRIM38O00635 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
TRIM38O00635 ZNF299P-201ENST00000406845 1804 ntBASIC2.9□□□□□ -1.95
TRIM38O00635 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.9□□□□□ -1.95
TRIM38O00635 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.9□□□□□ -1.95
TRIM38O00635 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
TRIM38O00635 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.9□□□□□ -1.95
TRIM38O00635 SNORD56.5-201ENST00000364281 72 ntBASIC2.89□□□□□ -1.95
TRIM38O00635 RNU6-1180P-201ENST00000364935 107 ntBASIC2.89□□□□□ -1.95
TRIM38O00635 RNU6-378P-201ENST00000384324 107 ntBASIC2.89□□□□□ -1.95
TRIM38O00635 Y_RNA.541-201ENST00000384640 113 ntBASIC2.89□□□□□ -1.95
TRIM38O00635 CBX3P9-201ENST00000402326 552 ntBASIC2.89□□□□□ -1.95
TRIM38O00635 RNA5SP494-201ENST00000410653 129 ntBASIC2.89□□□□□ -1.95
TRIM38O00635 AC007098.1-201ENST00000420122 367 ntBASIC2.89□□□□□ -1.95
TRIM38O00635 AIMP1P2-201ENST00000425294 312 ntBASIC2.89□□□□□ -1.95
TRIM38O00635 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.89□□□□□ -1.95
TRIM38O00635 AL445687.1-201ENST00000439946 251 ntBASIC2.89□□□□□ -1.95
TRIM38O00635 AL031659.1-201ENST00000447075 539 ntBASIC2.89□□□□□ -1.95
TRIM38O00635 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.89□□□□□ -1.95
TRIM38O00635 RPL30P1-201ENST00000488676 339 ntBASIC2.89□□□□□ -1.95
TRIM38O00635 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.89□□□□□ -1.95
TRIM38O00635 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms