Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
AP3B1O00203 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
AP3B1O00203 snoU2-30.2-201ENST00000362805 70 ntBASIC1.11□□□□□ -2.23
AP3B1O00203 Y_RNA.140-201ENST00000363474 103 ntBASIC1.11□□□□□ -2.23
AP3B1O00203 Y_RNA.169-201ENST00000363745 96 ntBASIC1.11□□□□□ -2.23
AP3B1O00203 RNU1-124P-201ENST00000363861 145 ntBASIC1.11□□□□□ -2.23
AP3B1O00203 RNU6-996P-201ENST00000365438 107 ntBASIC1.11□□□□□ -2.23
AP3B1O00203 RNU6-1235P-201ENST00000384559 107 ntBASIC1.11□□□□□ -2.23
AP3B1O00203 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
AP3B1O00203 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.11□□□□□ -2.23
AP3B1O00203 RNU7-63P-201ENST00000459054 62 ntBASIC1.11□□□□□ -2.23
AP3B1O00203 RNU6-498P-201ENST00000459468 107 ntBASIC1.11□□□□□ -2.23
AP3B1O00203 RNU6-1037P-201ENST00000459571 107 ntBASIC1.11□□□□□ -2.23
AP3B1O00203 RPS23P4-201ENST00000487908 423 ntBASIC1.11□□□□□ -2.23
AP3B1O00203 HMGN1P12-201ENST00000499125 195 ntBASIC1.11□□□□□ -2.23
AP3B1O00203 UBL5P1-201ENST00000507979 193 ntBASIC1.11□□□□□ -2.23
AP3B1O00203 SNORD116-28-201ENST00000516123 91 ntBASIC1.11□□□□□ -2.23
AP3B1O00203 CENPUP1-201ENST00000526649 1202 ntBASIC1.11□□□□□ -2.23
AP3B1O00203 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.11□□□□□ -2.23
AP3B1O00203 AL442163.3-201ENST00000554110 156 ntBASIC1.11□□□□□ -2.23
AP3B1O00203 AP000942.3-201ENST00000603702 160 ntBASIC1.11□□□□□ -2.23
AP3B1O00203 AL022345.2-201ENST00000606307 135 ntBASIC1.11□□□□□ -2.23
AP3B1O00203 AC005562.2-201ENST00000618264 111 ntBASIC1.11□□□□□ -2.23
AP3B1O00203 AC027335.2-201ENST00000624030 375 ntBASIC1.11□□□□□ -2.23
AP3B1O00203 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.11□□□□□ -2.23
AP3B1O00203 AL391516.1-201ENST00000554380 2449 ntBASIC1.11□□□□□ -2.23
AP3B1O00203 RNU6-227P-201ENST00000362865 103 ntBASIC1.1□□□□□ -2.23
AP3B1O00203 SNORA4.2-201ENST00000365313 147 ntBASIC1.1□□□□□ -2.23
AP3B1O00203 RNA5SP219-201ENST00000390940 113 ntBASIC1.1□□□□□ -2.23
AP3B1O00203 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.1□□□□□ -2.23
AP3B1O00203 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.1□□□□□ -2.23
AP3B1O00203 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.1□□□□□ -2.23
AP3B1O00203 SNORA14.1-201ENST00000516113 141 ntBASIC1.1□□□□□ -2.23
AP3B1O00203 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.1□□□□□ -2.23
AP3B1O00203 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC1.1□□□□□ -2.23
AP3B1O00203 MTND4P7-201ENST00000523876 130 ntBASIC1.1□□□□□ -2.23
AP3B1O00203 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.1□□□□□ -2.23
AP3B1O00203 AC016727.2-201ENST00000603988 621 ntBASIC1.1□□□□□ -2.23
AP3B1O00203 AC023510.2-201ENST00000622162 746 ntBASIC1.1□□□□□ -2.23
AP3B1O00203 RNU6-348P-201ENST00000384386 107 ntBASIC1.09□□□□□ -2.23
AP3B1O00203 AC004386.2-201ENST00000441858 148 ntBASIC1.09□□□□□ -2.23
AP3B1O00203 AC025465.4-201ENST00000513422 638 ntBASIC1.09□□□□□ -2.23
AP3B1O00203 CYCSP23-201ENST00000519781 313 ntBASIC1.09□□□□□ -2.23
AP3B1O00203 AC024995.1-201ENST00000523014 93 ntBASIC1.09□□□□□ -2.23
AP3B1O00203 LRRC34P1-201ENST00000542742 915 ntBASIC1.09□□□□□ -2.23
AP3B1O00203 MIR4424-201ENST00000585257 86 ntBASIC1.09□□□□□ -2.23
AP3B1O00203 AC104458.1-201ENST00000608243 463 ntBASIC1.09□□□□□ -2.23
AP3B1O00203 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.09□□□□□ -2.24
AP3B1O00203 RNU5B-2P-201ENST00000363036 113 ntBASIC1.08□□□□□ -2.24
AP3B1O00203 SNORA33-201ENST00000363664 130 ntBASIC1.08□□□□□ -2.24
AP3B1O00203 Y_RNA.381-201ENST00000365666 102 ntBASIC1.08□□□□□ -2.24
AP3B1O00203 MIR222-201ENST00000384992 110 ntBASIC1.08□□□□□ -2.24
AP3B1O00203 RN7SKP142-201ENST00000411236 328 ntBASIC1.08□□□□□ -2.24
AP3B1O00203 RPS26P42-201ENST00000413485 326 ntBASIC1.08□□□□□ -2.24
AP3B1O00203 CDK8P2-201ENST00000415020 547 ntBASIC1.08□□□□□ -2.24
AP3B1O00203 MTND2P9-201ENST00000422293 931 ntBASIC1.08□□□□□ -2.24
AP3B1O00203 DYNLT3P2-201ENST00000442517 295 ntBASIC1.08□□□□□ -2.24
AP3B1O00203 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC1.08□□□□□ -2.24
AP3B1O00203 AC016717.1-201ENST00000448918 286 ntBASIC1.08□□□□□ -2.24
AP3B1O00203 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.08□□□□□ -2.24
AP3B1O00203 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.08□□□□□ -2.24
AP3B1O00203 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.08□□□□□ -2.24
AP3B1O00203 AC136932.1-201ENST00000574771 208 ntBASIC1.08□□□□□ -2.24
AP3B1O00203 MIR4528-201ENST00000577763 90 ntBASIC1.08□□□□□ -2.24
AP3B1O00203 MIR5006-201ENST00000583027 110 ntBASIC1.08□□□□□ -2.24
AP3B1O00203 AC064836.2-201ENST00000609491 462 ntBASIC1.08□□□□□ -2.24
AP3B1O00203 TCL6_2.1-201ENST00000615162 119 ntBASIC1.08□□□□□ -2.24
AP3B1O00203 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.07□□□□□ -2.24
AP3B1O00203 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
AP3B1O00203 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
AP3B1O00203 AL391987.6-201ENST00000305671 199 ntBASIC1.07□□□□□ -2.24
AP3B1O00203 RNU5A-6P-201ENST00000384136 116 ntBASIC1.07□□□□□ -2.24
AP3B1O00203 RNU6-975P-201ENST00000384296 105 ntBASIC1.07□□□□□ -2.24
AP3B1O00203 MIR549A-201ENST00000385268 96 ntBASIC1.07□□□□□ -2.24
AP3B1O00203 RNU6-1158P-201ENST00000391167 107 ntBASIC1.07□□□□□ -2.24
AP3B1O00203 AL606923.1-201ENST00000406616 190 ntBASIC1.07□□□□□ -2.24
AP3B1O00203 MIR1253-201ENST00000408273 105 ntBASIC1.07□□□□□ -2.24
AP3B1O00203 SNRPEP10-201ENST00000420249 274 ntBASIC1.07□□□□□ -2.24
AP3B1O00203 MTND3P9-201ENST00000429526 346 ntBASIC1.07□□□□□ -2.24
AP3B1O00203 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.07□□□□□ -2.24
AP3B1O00203 MTCO2P18-201ENST00000457151 658 ntBASIC1.07□□□□□ -2.24
AP3B1O00203 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.07□□□□□ -2.24
AP3B1O00203 AC087343.1-201ENST00000477341 475 ntBASIC1.07□□□□□ -2.24
AP3B1O00203 AC093852.1-201ENST00000503587 266 ntBASIC1.07□□□□□ -2.24
AP3B1O00203 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.07□□□□□ -2.24
AP3B1O00203 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.07□□□□□ -2.24
AP3B1O00203 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.07□□□□□ -2.24
AP3B1O00203 AC004223.2-201ENST00000590309 544 ntBASIC1.07□□□□□ -2.24
AP3B1O00203 AL354950.2-201ENST00000617939 290 ntBASIC1.07□□□□□ -2.24
AP3B1O00203 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
AP3B1O00203 RNU6-1286P-201ENST00000383871 107 ntBASIC1.06□□□□□ -2.24
AP3B1O00203 RNU6-1103P-201ENST00000384150 107 ntBASIC1.06□□□□□ -2.24
AP3B1O00203 RNA5SP323-201ENST00000391094 133 ntBASIC1.06□□□□□ -2.24
AP3B1O00203 RNA5SP494-201ENST00000410653 129 ntBASIC1.06□□□□□ -2.24
AP3B1O00203 AC004866.1-201ENST00000411748 78 ntBASIC1.06□□□□□ -2.24
AP3B1O00203 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC1.06□□□□□ -2.24
AP3B1O00203 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.06□□□□□ -2.24
AP3B1O00203 USP9YP29-201ENST00000445112 563 ntBASIC1.06□□□□□ -2.24
AP3B1O00203 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.06□□□□□ -2.24
AP3B1O00203 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms