Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 AC091932.3-201ENST00000624223 323 ntBASIC1.92□□□□□ -2.1
CCDC188H7C350 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
CCDC188H7C350 MTND5P9-201ENST00000503854 1755 ntBASIC1.92□□□□□ -2.1
CCDC188H7C350 ZNF204P-201ENST00000416749 2397 ntBASIC1.92□□□□□ -2.1
CCDC188H7C350 AC092881.1-201ENST00000638218 2733 ntBASIC1.91□□□□□ -2.1
CCDC188H7C350 MTND4P5-201ENST00000435821 1374 ntBASIC1.91□□□□□ -2.1
CCDC188H7C350 CBX3P1-201ENST00000325243 554 ntBASIC1.91□□□□□ -2.1
CCDC188H7C350 RNU4-9P-201ENST00000364951 139 ntBASIC1.91□□□□□ -2.1
CCDC188H7C350 SNORA67.3-201ENST00000384366 140 ntBASIC1.91□□□□□ -2.1
CCDC188H7C350 MIR300-201ENST00000401138 83 ntBASIC1.91□□□□□ -2.1
CCDC188H7C350 RNU6ATAC25P-201ENST00000408798 117 ntBASIC1.91□□□□□ -2.1
CCDC188H7C350 AL358453.1-201ENST00000422522 250 ntBASIC1.91□□□□□ -2.1
CCDC188H7C350 MTATP6P13-201ENST00000438531 667 ntBASIC1.91□□□□□ -2.1
CCDC188H7C350 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.91□□□□□ -2.1
CCDC188H7C350 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.91□□□□□ -2.1
CCDC188H7C350 NFU1P2-201ENST00000448700 469 ntBASIC1.91□□□□□ -2.1
CCDC188H7C350 AC016925.1-201ENST00000458303 298 ntBASIC1.91□□□□□ -2.1
CCDC188H7C350 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.91□□□□□ -2.1
CCDC188H7C350 RNU4-49P-201ENST00000516080 140 ntBASIC1.91□□□□□ -2.1
CCDC188H7C350 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.91□□□□□ -2.1
CCDC188H7C350 MIR3122-201ENST00000577243 73 ntBASIC1.91□□□□□ -2.1
CCDC188H7C350 MIR3169-201ENST00000578032 83 ntBASIC1.91□□□□□ -2.1
CCDC188H7C350 AC008749.1-201ENST00000597650 306 ntBASIC1.91□□□□□ -2.1
CCDC188H7C350 AC009318.2-201ENST00000610917 651 ntBASIC1.91□□□□□ -2.1
CCDC188H7C350 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.91□□□□□ -2.1
CCDC188H7C350 U6atac.1-201ENST00000616025 117 ntBASIC1.91□□□□□ -2.1
CCDC188H7C350 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.91□□□□□ -2.1
CCDC188H7C350 SCARNA4-201ENST00000629045 128 ntBASIC1.91□□□□□ -2.1
CCDC188H7C350 AL159152.1-201ENST00000635019 2587 ntBASIC1.91□□□□□ -2.1
CCDC188H7C350 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.91□□□□□ -2.1
CCDC188H7C350 SNORD48-201ENST00000364953 64 ntBASIC1.9□□□□□ -2.11
CCDC188H7C350 RNU6-831P-201ENST00000384548 107 ntBASIC1.9□□□□□ -2.11
CCDC188H7C350 SNORA8-201ENST00000384574 139 ntBASIC1.9□□□□□ -2.11
CCDC188H7C350 SNORA12.2-201ENST00000391040 156 ntBASIC1.9□□□□□ -2.11
CCDC188H7C350 NCOR1P3-201ENST00000420479 303 ntBASIC1.9□□□□□ -2.11
CCDC188H7C350 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
CCDC188H7C350 AL603825.1-201ENST00000438481 80 ntBASIC1.9□□□□□ -2.11
CCDC188H7C350 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.9□□□□□ -2.11
CCDC188H7C350 RNU1-131P-201ENST00000458943 161 ntBASIC1.9□□□□□ -2.11
CCDC188H7C350 FO393415.2-201ENST00000480085 343 ntBASIC1.9□□□□□ -2.11
CCDC188H7C350 AC097473.1-201ENST00000508142 408 ntBASIC1.9□□□□□ -2.11
CCDC188H7C350 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.9□□□□□ -2.11
CCDC188H7C350 MRPS17P9-201ENST00000511924 393 ntBASIC1.9□□□□□ -2.11
CCDC188H7C350 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.9□□□□□ -2.11
CCDC188H7C350 DEFB131C-201ENST00000528817 165 ntBASIC1.9□□□□□ -2.11
CCDC188H7C350 MIR3618-201ENST00000580330 88 ntBASIC1.9□□□□□ -2.11
CCDC188H7C350 AC005786.1-201ENST00000588553 154 ntBASIC1.9□□□□□ -2.11
CCDC188H7C350 MIR6128-201ENST00000615528 109 ntBASIC1.9□□□□□ -2.11
CCDC188H7C350 AC009248.2-201ENST00000619826 254 ntBASIC1.9□□□□□ -2.11
CCDC188H7C350 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.9□□□□□ -2.11
CCDC188H7C350 ZNF72P-201ENST00000425869 1908 ntBASIC1.89□□□□□ -2.11
CCDC188H7C350 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
CCDC188H7C350 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
CCDC188H7C350 SNORD50.1-201ENST00000362987 71 ntBASIC1.89□□□□□ -2.11
CCDC188H7C350 RNA5SP212-201ENST00000391223 107 ntBASIC1.89□□□□□ -2.11
CCDC188H7C350 RNU6-510P-201ENST00000391239 108 ntBASIC1.89□□□□□ -2.11
CCDC188H7C350 MIR1283-1-201ENST00000408494 87 ntBASIC1.89□□□□□ -2.11
CCDC188H7C350 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.89□□□□□ -2.11
CCDC188H7C350 EIF4EP2-201ENST00000422816 654 ntBASIC1.89□□□□□ -2.11
CCDC188H7C350 HMGB1P18-201ENST00000438801 619 ntBASIC1.89□□□□□ -2.11
CCDC188H7C350 AC096638.1-201ENST00000444678 216 ntBASIC1.89□□□□□ -2.11
CCDC188H7C350 AC009237.7-201ENST00000447357 229 ntBASIC1.89□□□□□ -2.11
CCDC188H7C350 MTCO3P8-201ENST00000453691 755 ntBASIC1.89□□□□□ -2.11
CCDC188H7C350 AC108210.2-201ENST00000503681 201 ntBASIC1.89□□□□□ -2.11
CCDC188H7C350 RNU6-566P-201ENST00000516790 107 ntBASIC1.89□□□□□ -2.11
CCDC188H7C350 RNU1-117P-201ENST00000517041 158 ntBASIC1.89□□□□□ -2.11
CCDC188H7C350 RNA5SP454-201ENST00000517231 127 ntBASIC1.89□□□□□ -2.11
CCDC188H7C350 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.89□□□□□ -2.11
CCDC188H7C350 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.89□□□□□ -2.11
CCDC188H7C350 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.89□□□□□ -2.11
CCDC188H7C350 AC018638.8-201ENST00000588755 281 ntBASIC1.89□□□□□ -2.11
CCDC188H7C350 AC002553.4-201ENST00000616896 331 ntBASIC1.89□□□□□ -2.11
CCDC188H7C350 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.88□□□□□ -2.11
CCDC188H7C350 RNU6-1305P-201ENST00000364353 104 ntBASIC1.88□□□□□ -2.11
CCDC188H7C350 RNU6-418P-201ENST00000384035 107 ntBASIC1.88□□□□□ -2.11
CCDC188H7C350 SNORA48.1-201ENST00000390879 135 ntBASIC1.88□□□□□ -2.11
CCDC188H7C350 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC1.88□□□□□ -2.11
CCDC188H7C350 AL591806.2-201ENST00000433122 173 ntBASIC1.88□□□□□ -2.11
CCDC188H7C350 ATP5J2P3-201ENST00000451550 258 ntBASIC1.88□□□□□ -2.11
CCDC188H7C350 AC010531.2-201ENST00000465012 153 ntBASIC1.88□□□□□ -2.11
CCDC188H7C350 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.88□□□□□ -2.11
CCDC188H7C350 Y_RNA.682-201ENST00000516457 100 ntBASIC1.88□□□□□ -2.11
CCDC188H7C350 RNU6-1088P-201ENST00000516850 104 ntBASIC1.88□□□□□ -2.11
CCDC188H7C350 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.88□□□□□ -2.11
CCDC188H7C350 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.88□□□□□ -2.11
CCDC188H7C350 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.88□□□□□ -2.11
CCDC188H7C350 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC1.88□□□□□ -2.11
CCDC188H7C350 AC005668.1-201ENST00000571142 476 ntBASIC1.88□□□□□ -2.11
CCDC188H7C350 SNORA59B-202ENST00000578183 701 ntBASIC1.88□□□□□ -2.11
CCDC188H7C350 MIR5094-201ENST00000578766 85 ntBASIC1.88□□□□□ -2.11
CCDC188H7C350 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.88□□□□□ -2.11
CCDC188H7C350 AL096840.1-201ENST00000603287 93 ntBASIC1.88□□□□□ -2.11
CCDC188H7C350 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
CCDC188H7C350 Y_RNA.319-201ENST00000365138 92 ntBASIC1.87□□□□□ -2.11
CCDC188H7C350 MIR487A-201ENST00000385009 80 ntBASIC1.87□□□□□ -2.11
CCDC188H7C350 MIR153-2-201ENST00000385225 87 ntBASIC1.87□□□□□ -2.11
CCDC188H7C350 Y_RNA.619-201ENST00000410951 90 ntBASIC1.87□□□□□ -2.11
CCDC188H7C350 RNU6-1148P-201ENST00000410992 104 ntBASIC1.87□□□□□ -2.11
CCDC188H7C350 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.87□□□□□ -2.11
CCDC188H7C350 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 184.3 ms