Protein–RNA interactions for Protein: A6NMZ7

COL6A6, Collagen alpha-6(VI) chain, humanhuman

Predictions only

Length 2,263 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6A6NMZ7 CYP4A27P-201ENST00000567218 190 ntBASIC0.67□□□□□ -2.3
COL6A6A6NMZ7 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC0.67□□□□□ -2.3
COL6A6A6NMZ7 MIR5006-201ENST00000583027 110 ntBASIC0.67□□□□□ -2.3
COL6A6A6NMZ7 MIR4424-201ENST00000585257 86 ntBASIC0.67□□□□□ -2.3
COL6A6A6NMZ7 BNIP3P25-201ENST00000596023 559 ntBASIC0.67□□□□□ -2.3
COL6A6A6NMZ7 AC068790.2-201ENST00000602601 557 ntBASIC0.67□□□□□ -2.3
COL6A6A6NMZ7 AC078795.3-201ENST00000602913 472 ntBASIC0.67□□□□□ -2.3
COL6A6A6NMZ7 AC107304.1-201ENST00000604229 296 ntBASIC0.67□□□□□ -2.3
COL6A6A6NMZ7 AL158032.1-201ENST00000605401 106 ntBASIC0.67□□□□□ -2.3
COL6A6A6NMZ7 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC0.67□□□□□ -2.3
COL6A6A6NMZ7 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC0.67□□□□□ -2.3
COL6A6A6NMZ7 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.67□□□□□ -2.3
COL6A6A6NMZ7 AC067863.3-201ENST00000624172 122 ntBASIC0.67□□□□□ -2.3
COL6A6A6NMZ7 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC0.67□□□□□ -2.3
COL6A6A6NMZ7 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
COL6A6A6NMZ7 ZNF702P-202ENST00000434269 1966 ntBASIC0.66□□□□□ -2.3
COL6A6A6NMZ7 RNU6-222P-201ENST00000362438 107 ntBASIC0.66□□□□□ -2.3
COL6A6A6NMZ7 SNORD31B-201ENST00000364977 69 ntBASIC0.66□□□□□ -2.3
COL6A6A6NMZ7 SNORD73A-201ENST00000386062 65 ntBASIC0.66□□□□□ -2.3
COL6A6A6NMZ7 RPS29P13-201ENST00000402041 169 ntBASIC0.66□□□□□ -2.3
COL6A6A6NMZ7 MTCYBP2-201ENST00000407745 171 ntBASIC0.66□□□□□ -2.3
COL6A6A6NMZ7 MIR1283-2-201ENST00000408621 87 ntBASIC0.66□□□□□ -2.3
COL6A6A6NMZ7 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC0.66□□□□□ -2.3
COL6A6A6NMZ7 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC0.66□□□□□ -2.3
COL6A6A6NMZ7 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC0.66□□□□□ -2.3
COL6A6A6NMZ7 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC0.66□□□□□ -2.3
COL6A6A6NMZ7 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC0.66□□□□□ -2.3
COL6A6A6NMZ7 AC092628.1-201ENST00000436250 252 ntBASIC0.66□□□□□ -2.3
COL6A6A6NMZ7 TRBV25OR9-2-201ENST00000438417 374 ntBASIC0.66□□□□□ -2.3
COL6A6A6NMZ7 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC0.66□□□□□ -2.3
COL6A6A6NMZ7 MTND2P4-201ENST00000445034 1004 ntBASIC0.66□□□□□ -2.3
COL6A6A6NMZ7 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC0.66□□□□□ -2.3
COL6A6A6NMZ7 AC114982.1-201ENST00000469402 321 ntBASIC0.66□□□□□ -2.3
COL6A6A6NMZ7 AC010409.1-201ENST00000487382 476 ntBASIC0.66□□□□□ -2.3
COL6A6A6NMZ7 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC0.66□□□□□ -2.3
COL6A6A6NMZ7 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.66□□□□□ -2.3
COL6A6A6NMZ7 RBBP4P6-201ENST00000508098 202 ntBASIC0.66□□□□□ -2.3
COL6A6A6NMZ7 IL7-206ENST00000520269 456 ntTSL 3 BASIC0.66□□□□□ -2.3
COL6A6A6NMZ7 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC0.66□□□□□ -2.3
COL6A6A6NMZ7 AC026371.1-201ENST00000551867 419 ntBASIC0.66□□□□□ -2.3
COL6A6A6NMZ7 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.66□□□□□ -2.3
COL6A6A6NMZ7 AL356157.2-201ENST00000605122 111 ntBASIC0.66□□□□□ -2.3
COL6A6A6NMZ7 AC018889.1-201ENST00000605372 397 ntBASIC0.66□□□□□ -2.3
COL6A6A6NMZ7 RNU6-85P-201ENST00000605989 107 ntBASIC0.66□□□□□ -2.3
COL6A6A6NMZ7 AL050343.2-201ENST00000607338 280 ntBASIC0.66□□□□□ -2.3
COL6A6A6NMZ7 AC245008.1-201ENST00000608123 476 ntBASIC0.66□□□□□ -2.3
COL6A6A6NMZ7 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC0.66□□□□□ -2.3
COL6A6A6NMZ7 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC0.66□□□□□ -2.3
COL6A6A6NMZ7 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.66□□□□□ -2.3
COL6A6A6NMZ7 Y_RNA.378-201ENST00000365652 113 ntBASIC0.66□□□□□ -2.3
COL6A6A6NMZ7 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC0.66□□□□□ -2.3
COL6A6A6NMZ7 MIR518A2-201ENST00000384966 87 ntBASIC0.66□□□□□ -2.3
COL6A6A6NMZ7 AC009310.1-201ENST00000414414 451 ntBASIC0.66□□□□□ -2.3
COL6A6A6NMZ7 AL158823.1-201ENST00000418441 478 ntBASIC0.66□□□□□ -2.3
COL6A6A6NMZ7 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.66□□□□□ -2.3
COL6A6A6NMZ7 MTND1P29-201ENST00000448112 647 ntBASIC0.66□□□□□ -2.3
COL6A6A6NMZ7 AL356010.1-201ENST00000456364 102 ntBASIC0.66□□□□□ -2.3
COL6A6A6NMZ7 RNU6-261P-201ENST00000459506 102 ntBASIC0.66□□□□□ -2.3
COL6A6A6NMZ7 HMGB1P29-201ENST00000505659 499 ntBASIC0.66□□□□□ -2.3
COL6A6A6NMZ7 RNU5F-4P-201ENST00000516581 114 ntBASIC0.66□□□□□ -2.3
COL6A6A6NMZ7 RNU6-229P-201ENST00000516614 102 ntBASIC0.66□□□□□ -2.3
COL6A6A6NMZ7 SNORA44.1-201ENST00000517031 108 ntBASIC0.66□□□□□ -2.3
COL6A6A6NMZ7 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC0.66□□□□□ -2.3
COL6A6A6NMZ7 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.66□□□□□ -2.3
COL6A6A6NMZ7 AL137161.1-201ENST00000532231 390 ntBASIC0.66□□□□□ -2.3
COL6A6A6NMZ7 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC0.66□□□□□ -2.3
COL6A6A6NMZ7 AC022202.1-201ENST00000613515 211 ntBASIC0.66□□□□□ -2.3
COL6A6A6NMZ7 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC0.66□□□□□ -2.3
COL6A6A6NMZ7 FER-210ENST00000628534 558 ntTSL 5 BASIC0.66□□□□□ -2.3
COL6A6A6NMZ7 AC068137.4-201ENST00000638485 296 ntBASIC0.66□□□□□ -2.3
COL6A6A6NMZ7 snoU2-30.2-201ENST00000362805 70 ntBASIC0.65□□□□□ -2.31
COL6A6A6NMZ7 RNU6-1120P-201ENST00000362988 108 ntBASIC0.65□□□□□ -2.31
COL6A6A6NMZ7 RNA5SP499-201ENST00000363982 119 ntBASIC0.65□□□□□ -2.31
COL6A6A6NMZ7 Y_RNA.201-201ENST00000364052 96 ntBASIC0.65□□□□□ -2.31
COL6A6A6NMZ7 SNORA25B-201ENST00000365507 128 ntBASIC0.65□□□□□ -2.31
COL6A6A6NMZ7 RNU6-827P-201ENST00000365553 106 ntBASIC0.65□□□□□ -2.31
COL6A6A6NMZ7 RNU6ATAC2P-201ENST00000387943 126 ntBASIC0.65□□□□□ -2.31
COL6A6A6NMZ7 MIR1283-1-201ENST00000408494 87 ntBASIC0.65□□□□□ -2.31
COL6A6A6NMZ7 RN7SKP61-201ENST00000410642 295 ntBASIC0.65□□□□□ -2.31
COL6A6A6NMZ7 CDK8P2-201ENST00000415020 547 ntBASIC0.65□□□□□ -2.31
COL6A6A6NMZ7 RPL30P13-201ENST00000418873 348 ntBASIC0.65□□□□□ -2.31
COL6A6A6NMZ7 EIF4EP2-201ENST00000422816 654 ntBASIC0.65□□□□□ -2.31
COL6A6A6NMZ7 AC002486.1-201ENST00000435098 391 ntBASIC0.65□□□□□ -2.31
COL6A6A6NMZ7 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC0.65□□□□□ -2.31
COL6A6A6NMZ7 AL035666.1-201ENST00000446195 348 ntBASIC0.65□□□□□ -2.31
COL6A6A6NMZ7 Z83846.1-201ENST00000446798 265 ntBASIC0.65□□□□□ -2.31
COL6A6A6NMZ7 RPL39P29-201ENST00000447779 157 ntBASIC0.65□□□□□ -2.31
COL6A6A6NMZ7 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC0.65□□□□□ -2.31
COL6A6A6NMZ7 RNU7-182P-201ENST00000459009 62 ntBASIC0.65□□□□□ -2.31
COL6A6A6NMZ7 AC011406.1-201ENST00000512440 370 ntBASIC0.65□□□□□ -2.31
COL6A6A6NMZ7 RNU6ATAC13P-201ENST00000516152 131 ntBASIC0.65□□□□□ -2.31
COL6A6A6NMZ7 RNU6-1198P-201ENST00000516904 67 ntBASIC0.65□□□□□ -2.31
COL6A6A6NMZ7 APOOP3-201ENST00000536787 586 ntBASIC0.65□□□□□ -2.31
COL6A6A6NMZ7 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC0.65□□□□□ -2.31
COL6A6A6NMZ7 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC0.65□□□□□ -2.31
COL6A6A6NMZ7 MIR5692C1-201ENST00000585309 91 ntBASIC0.65□□□□□ -2.31
COL6A6A6NMZ7 AP001836.1-201ENST00000604675 523 ntBASIC0.65□□□□□ -2.31
COL6A6A6NMZ7 AP000654.2-201ENST00000605633 586 ntBASIC0.65□□□□□ -2.31
COL6A6A6NMZ7 AC064836.2-201ENST00000609491 462 ntBASIC0.65□□□□□ -2.31
COL6A6A6NMZ7 AC006504.8-201ENST00000621046 635 ntBASIC0.65□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms