Protein–RNA interactions for Protein: A6NL88

SHISA7, Protein shisa-7, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA7A6NL88 Y_RNA.670-201ENST00000516255 105 ntBASIC2.02□□□□□ -2.09
SHISA7A6NL88 RNU6-264P-201ENST00000517134 104 ntBASIC2.02□□□□□ -2.09
SHISA7A6NL88 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.02□□□□□ -2.09
SHISA7A6NL88 CYCSP26-201ENST00000534107 320 ntBASIC2.02□□□□□ -2.09
SHISA7A6NL88 APOOP3-201ENST00000536787 586 ntBASIC2.02□□□□□ -2.09
SHISA7A6NL88 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.02□□□□□ -2.09
SHISA7A6NL88 AC021231.3-201ENST00000558497 370 ntBASIC2.02□□□□□ -2.09
SHISA7A6NL88 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.02□□□□□ -2.09
SHISA7A6NL88 MIR3136-201ENST00000583498 78 ntBASIC2.02□□□□□ -2.09
SHISA7A6NL88 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.02□□□□□ -2.09
SHISA7A6NL88 MIR8070-201ENST00000616510 88 ntBASIC2.02□□□□□ -2.09
SHISA7A6NL88 MTND4LP32-201ENST00000636111 270 ntBASIC2.02□□□□□ -2.09
SHISA7A6NL88 AC233981.2-201ENST00000611524 1614 ntBASIC2.02□□□□□ -2.09
SHISA7A6NL88 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
SHISA7A6NL88 Y_RNA.122-201ENST00000363331 96 ntBASIC2.01□□□□□ -2.09
SHISA7A6NL88 SNORA25.9-201ENST00000365087 128 ntBASIC2.01□□□□□ -2.09
SHISA7A6NL88 SNORD23.1-201ENST00000408212 104 ntBASIC2.01□□□□□ -2.09
SHISA7A6NL88 RNU6-174P-201ENST00000410406 106 ntBASIC2.01□□□□□ -2.09
SHISA7A6NL88 AL358453.1-201ENST00000422522 250 ntBASIC2.01□□□□□ -2.09
SHISA7A6NL88 AL445685.2-201ENST00000422551 342 ntBASIC2.01□□□□□ -2.09
SHISA7A6NL88 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.01□□□□□ -2.09
SHISA7A6NL88 RPL7P42-201ENST00000481005 679 ntBASIC2.01□□□□□ -2.09
SHISA7A6NL88 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.01□□□□□ -2.09
SHISA7A6NL88 HMGN1P13-201ENST00000505795 138 ntBASIC2.01□□□□□ -2.09
SHISA7A6NL88 AC097473.1-201ENST00000508142 408 ntBASIC2.01□□□□□ -2.09
SHISA7A6NL88 SNORA31.11-201ENST00000516528 139 ntBASIC2.01□□□□□ -2.09
SHISA7A6NL88 Y_RNA.718-201ENST00000517110 102 ntBASIC2.01□□□□□ -2.09
SHISA7A6NL88 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.01□□□□□ -2.09
SHISA7A6NL88 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.01□□□□□ -2.09
SHISA7A6NL88 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.01□□□□□ -2.09
SHISA7A6NL88 MIR3683-201ENST00000580847 82 ntBASIC2.01□□□□□ -2.09
SHISA7A6NL88 CYP2C61P-201ENST00000604072 290 ntBASIC2.01□□□□□ -2.09
SHISA7A6NL88 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.01□□□□□ -2.09
SHISA7A6NL88 AC137590.2-201ENST00000619709 240 ntBASIC2.01□□□□□ -2.09
SHISA7A6NL88 AC098657.3-201ENST00000620434 263 ntBASIC2.01□□□□□ -2.09
SHISA7A6NL88 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
SHISA7A6NL88 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.01□□□□□ -2.09
SHISA7A6NL88 MTND5P10-201ENST00000603719 1809 ntBASIC2.01□□□□□ -2.09
SHISA7A6NL88 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2□□□□□ -2.09
SHISA7A6NL88 snoU2_19.1-201ENST00000362361 80 ntBASIC2□□□□□ -2.09
SHISA7A6NL88 RNU1-23P-201ENST00000363361 144 ntBASIC2□□□□□ -2.09
SHISA7A6NL88 Y_RNA.146-201ENST00000363549 102 ntBASIC2□□□□□ -2.09
SHISA7A6NL88 RNU6-1059P-201ENST00000363752 98 ntBASIC2□□□□□ -2.09
SHISA7A6NL88 Y_RNA.796-201ENST00000364268 102 ntBASIC2□□□□□ -2.09
SHISA7A6NL88 Y_RNA.799-201ENST00000364992 102 ntBASIC2□□□□□ -2.09
SHISA7A6NL88 SNORA25B-201ENST00000365507 128 ntBASIC2□□□□□ -2.09
SHISA7A6NL88 Y_RNA.509-201ENST00000384506 99 ntBASIC2□□□□□ -2.09
SHISA7A6NL88 Y_RNA.535-201ENST00000384612 99 ntBASIC2□□□□□ -2.09
SHISA7A6NL88 SNORA26.3-201ENST00000391119 136 ntBASIC2□□□□□ -2.09
SHISA7A6NL88 AL590135.1-201ENST00000422215 156 ntBASIC2□□□□□ -2.09
SHISA7A6NL88 AC019205.3-201ENST00000424573 156 ntBASIC2□□□□□ -2.09
SHISA7A6NL88 AC016700.2-201ENST00000446011 156 ntBASIC2□□□□□ -2.09
SHISA7A6NL88 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2□□□□□ -2.09
SHISA7A6NL88 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2□□□□□ -2.09
SHISA7A6NL88 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2□□□□□ -2.09
SHISA7A6NL88 AL163540.1-201ENST00000485382 386 ntBASIC2□□□□□ -2.09
SHISA7A6NL88 AC015911.1-201ENST00000495111 156 ntBASIC2□□□□□ -2.09
SHISA7A6NL88 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2□□□□□ -2.09
SHISA7A6NL88 IGLV3-17-201ENST00000519099 244 ntBASIC2□□□□□ -2.09
SHISA7A6NL88 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2□□□□□ -2.09
SHISA7A6NL88 AC018630.3-201ENST00000542637 96 ntBASIC2□□□□□ -2.09
SHISA7A6NL88 MIR3126-201ENST00000577443 74 ntBASIC2□□□□□ -2.09
SHISA7A6NL88 AL034555.1-201ENST00000604816 211 ntBASIC2□□□□□ -2.09
SHISA7A6NL88 AL359314.1-201ENST00000616913 261 ntBASIC2□□□□□ -2.09
SHISA7A6NL88 SNORD98-201ENST00000636377 67 ntBASIC2□□□□□ -2.09
SHISA7A6NL88 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2□□□□□ -2.09
SHISA7A6NL88 ZNF299P-201ENST00000406845 1804 ntBASIC2□□□□□ -2.09
SHISA7A6NL88 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
SHISA7A6NL88 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
SHISA7A6NL88 RNY1P10-201ENST00000363268 113 ntBASIC1.99□□□□□ -2.09
SHISA7A6NL88 Y_RNA.187-201ENST00000363918 113 ntBASIC1.99□□□□□ -2.09
SHISA7A6NL88 RNU6-1286P-201ENST00000383871 107 ntBASIC1.99□□□□□ -2.09
SHISA7A6NL88 RNU6-842P-201ENST00000384269 107 ntBASIC1.99□□□□□ -2.09
SHISA7A6NL88 RNU6-310P-201ENST00000384655 107 ntBASIC1.99□□□□□ -2.09
SHISA7A6NL88 MIR9-3-201ENST00000385084 90 ntBASIC1.99□□□□□ -2.09
SHISA7A6NL88 RNU6-700P-201ENST00000391043 107 ntBASIC1.99□□□□□ -2.09
SHISA7A6NL88 RNU6-1304P-201ENST00000411374 106 ntBASIC1.99□□□□□ -2.09
SHISA7A6NL88 HMGB3P2-201ENST00000411913 584 ntBASIC1.99□□□□□ -2.09
SHISA7A6NL88 BTF3P4-201ENST00000418852 495 ntBASIC1.99□□□□□ -2.09
SHISA7A6NL88 IPO7P1-201ENST00000442031 636 ntBASIC1.99□□□□□ -2.09
SHISA7A6NL88 FO393415.2-201ENST00000480085 343 ntBASIC1.99□□□□□ -2.09
SHISA7A6NL88 AC018868.1-201ENST00000491307 315 ntBASIC1.99□□□□□ -2.09
SHISA7A6NL88 TRMT112P2-201ENST00000512910 132 ntBASIC1.99□□□□□ -2.09
SHISA7A6NL88 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.99□□□□□ -2.09
SHISA7A6NL88 PRELID2P1-201ENST00000552837 301 ntBASIC1.99□□□□□ -2.09
SHISA7A6NL88 AC121758.2-201ENST00000553271 193 ntBASIC1.99□□□□□ -2.09
SHISA7A6NL88 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.99□□□□□ -2.09
SHISA7A6NL88 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
SHISA7A6NL88 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
SHISA7A6NL88 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
SHISA7A6NL88 AC005336.3-201ENST00000623833 2679 ntBASIC1.98□□□□□ -2.09
SHISA7A6NL88 RNU6-661P-201ENST00000362409 107 ntBASIC1.98□□□□□ -2.09
SHISA7A6NL88 RNU4-9P-201ENST00000364951 139 ntBASIC1.98□□□□□ -2.09
SHISA7A6NL88 SNORA6-201ENST00000384033 151 ntBASIC1.98□□□□□ -2.09
SHISA7A6NL88 Y_RNA.473-201ENST00000384333 102 ntBASIC1.98□□□□□ -2.09
SHISA7A6NL88 MIR489-201ENST00000384923 84 ntBASIC1.98□□□□□ -2.09
SHISA7A6NL88 MIR518E-201ENST00000385252 88 ntBASIC1.98□□□□□ -2.09
SHISA7A6NL88 SNORA75.6-201ENST00000391318 127 ntBASIC1.98□□□□□ -2.09
SHISA7A6NL88 RNA5SP494-201ENST00000410653 129 ntBASIC1.98□□□□□ -2.09
SHISA7A6NL88 Y_RNA.646-201ENST00000410980 101 ntBASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms