Protein–RNA interactions for Protein: A6NJ46

NKX6-3, Homeobox protein Nkx-6.3, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-3A6NJ46 SNORA11.4-201ENST00000408823 129 ntBASIC1.85□□□□□ -2.11
NKX6-3A6NJ46 RN7SKP192-201ENST00000411291 327 ntBASIC1.85□□□□□ -2.11
NKX6-3A6NJ46 MTND4P18-201ENST00000447010 465 ntBASIC1.85□□□□□ -2.11
NKX6-3A6NJ46 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.85□□□□□ -2.11
NKX6-3A6NJ46 RNA5SP200-201ENST00000516360 103 ntBASIC1.85□□□□□ -2.11
NKX6-3A6NJ46 RNU6-875P-201ENST00000516488 106 ntBASIC1.85□□□□□ -2.11
NKX6-3A6NJ46 AL590705.4-201ENST00000532209 134 ntBASIC1.85□□□□□ -2.11
NKX6-3A6NJ46 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.85□□□□□ -2.11
NKX6-3A6NJ46 UBL5P4-201ENST00000562584 236 ntBASIC1.85□□□□□ -2.11
NKX6-3A6NJ46 AC007229.1-201ENST00000590455 412 ntBASIC1.85□□□□□ -2.11
NKX6-3A6NJ46 AC005014.2-201ENST00000607795 599 ntBASIC1.85□□□□□ -2.11
NKX6-3A6NJ46 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.85□□□□□ -2.11
NKX6-3A6NJ46 Y_RNA.804-201ENST00000615262 101 ntBASIC1.85□□□□□ -2.11
NKX6-3A6NJ46 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.85□□□□□ -2.11
NKX6-3A6NJ46 AC104260.1-201ENST00000616660 539 ntBASIC1.85□□□□□ -2.11
NKX6-3A6NJ46 AC137590.2-201ENST00000619709 240 ntBASIC1.85□□□□□ -2.11
NKX6-3A6NJ46 AC009831.4-201ENST00000620744 325 ntBASIC1.85□□□□□ -2.11
NKX6-3A6NJ46 AC092794.2-201ENST00000620933 563 ntBASIC1.85□□□□□ -2.11
NKX6-3A6NJ46 AC091932.3-201ENST00000624223 323 ntBASIC1.85□□□□□ -2.11
NKX6-3A6NJ46 MTND4LP32-201ENST00000636111 270 ntBASIC1.85□□□□□ -2.11
NKX6-3A6NJ46 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.11
NKX6-3A6NJ46 RNU6-595P-201ENST00000363944 107 ntBASIC1.84□□□□□ -2.11
NKX6-3A6NJ46 Y_RNA.474-201ENST00000384341 102 ntBASIC1.84□□□□□ -2.11
NKX6-3A6NJ46 MIR518A2-201ENST00000384966 87 ntBASIC1.84□□□□□ -2.11
NKX6-3A6NJ46 MIR597-201ENST00000384968 97 ntBASIC1.84□□□□□ -2.11
NKX6-3A6NJ46 HMGN2P39-201ENST00000398005 273 ntBASIC1.84□□□□□ -2.11
NKX6-3A6NJ46 RNA5SP425-201ENST00000410336 112 ntBASIC1.84□□□□□ -2.11
NKX6-3A6NJ46 RN7SKP284-201ENST00000411002 343 ntBASIC1.84□□□□□ -2.11
NKX6-3A6NJ46 AC004866.1-201ENST00000411748 78 ntBASIC1.84□□□□□ -2.11
NKX6-3A6NJ46 SRIP3-201ENST00000413200 219 ntBASIC1.84□□□□□ -2.11
NKX6-3A6NJ46 Z98742.3-201ENST00000418637 326 ntBASIC1.84□□□□□ -2.11
NKX6-3A6NJ46 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.84□□□□□ -2.11
NKX6-3A6NJ46 MTND4LP11-201ENST00000422184 280 ntBASIC1.84□□□□□ -2.11
NKX6-3A6NJ46 AC093019.1-201ENST00000443135 252 ntBASIC1.84□□□□□ -2.11
NKX6-3A6NJ46 MTND5P20-201ENST00000448677 143 ntBASIC1.84□□□□□ -2.11
NKX6-3A6NJ46 RPL30P15-201ENST00000457129 321 ntBASIC1.84□□□□□ -2.11
NKX6-3A6NJ46 AC055731.1-201ENST00000474387 401 ntBASIC1.84□□□□□ -2.11
NKX6-3A6NJ46 RNU7-175P-201ENST00000515915 61 ntBASIC1.84□□□□□ -2.11
NKX6-3A6NJ46 RNA5SP137-201ENST00000516833 135 ntBASIC1.84□□□□□ -2.11
NKX6-3A6NJ46 Y_RNA.702-201ENST00000516843 96 ntBASIC1.84□□□□□ -2.11
NKX6-3A6NJ46 SNORA31.25-201ENST00000517242 134 ntBASIC1.84□□□□□ -2.11
NKX6-3A6NJ46 APOOP3-201ENST00000536787 586 ntBASIC1.84□□□□□ -2.11
NKX6-3A6NJ46 FRG2DP-202ENST00000566967 323 ntBASIC1.84□□□□□ -2.11
NKX6-3A6NJ46 AC116312.1-201ENST00000606841 314 ntBASIC1.84□□□□□ -2.11
NKX6-3A6NJ46 uc_338.20-201ENST00000621563 178 ntBASIC1.84□□□□□ -2.11
NKX6-3A6NJ46 MIR1302-1-201ENST00000637932 143 ntBASIC1.84□□□□□ -2.11
NKX6-3A6NJ46 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
NKX6-3A6NJ46 MTND4P1-201ENST00000457501 1466 ntBASIC1.83□□□□□ -2.12
NKX6-3A6NJ46 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
NKX6-3A6NJ46 RNU6-222P-201ENST00000362438 107 ntBASIC1.83□□□□□ -2.12
NKX6-3A6NJ46 RNA5SP276-201ENST00000362580 94 ntBASIC1.83□□□□□ -2.12
NKX6-3A6NJ46 Y_RNA.319-201ENST00000365138 92 ntBASIC1.83□□□□□ -2.12
NKX6-3A6NJ46 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.83□□□□□ -2.12
NKX6-3A6NJ46 MIR153-2-201ENST00000385225 87 ntBASIC1.83□□□□□ -2.12
NKX6-3A6NJ46 RNU6-1009P-201ENST00000390996 107 ntBASIC1.83□□□□□ -2.12
NKX6-3A6NJ46 SNORA48.3-201ENST00000391081 134 ntBASIC1.83□□□□□ -2.12
NKX6-3A6NJ46 RNU11-3P-201ENST00000391111 133 ntBASIC1.83□□□□□ -2.12
NKX6-3A6NJ46 RN7SKP223-201ENST00000410582 62 ntBASIC1.83□□□□□ -2.12
NKX6-3A6NJ46 RPS26P42-201ENST00000413485 326 ntBASIC1.83□□□□□ -2.12
NKX6-3A6NJ46 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.83□□□□□ -2.12
NKX6-3A6NJ46 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.83□□□□□ -2.12
NKX6-3A6NJ46 AC139712.2-201ENST00000424302 339 ntBASIC1.83□□□□□ -2.12
NKX6-3A6NJ46 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.83□□□□□ -2.12
NKX6-3A6NJ46 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.83□□□□□ -2.12
NKX6-3A6NJ46 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
NKX6-3A6NJ46 AC092473.1-201ENST00000441098 221 ntBASIC1.83□□□□□ -2.12
NKX6-3A6NJ46 RNU7-87P-201ENST00000459343 62 ntBASIC1.83□□□□□ -2.12
NKX6-3A6NJ46 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.83□□□□□ -2.12
NKX6-3A6NJ46 RNU1-117P-201ENST00000517041 158 ntBASIC1.83□□□□□ -2.12
NKX6-3A6NJ46 SNRPGP18-201ENST00000553000 214 ntBASIC1.83□□□□□ -2.12
NKX6-3A6NJ46 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.83□□□□□ -2.12
NKX6-3A6NJ46 AL096840.1-201ENST00000603287 93 ntBASIC1.83□□□□□ -2.12
NKX6-3A6NJ46 AC113139.1-201ENST00000605049 239 ntBASIC1.83□□□□□ -2.12
NKX6-3A6NJ46 AL355802.3-201ENST00000607571 545 ntBASIC1.83□□□□□ -2.12
NKX6-3A6NJ46 AL590240.4-201ENST00000616908 390 ntBASIC1.83□□□□□ -2.12
NKX6-3A6NJ46 AC130454.1-201ENST00000622948 401 ntBASIC1.83□□□□□ -2.12
NKX6-3A6NJ46 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.83□□□□□ -2.12
NKX6-3A6NJ46 MTND5P6-201ENST00000422338 1798 ntBASIC1.82□□□□□ -2.12
NKX6-3A6NJ46 RNU1-76P-201ENST00000362903 159 ntBASIC1.82□□□□□ -2.12
NKX6-3A6NJ46 RNY1P16-201ENST00000363063 111 ntBASIC1.82□□□□□ -2.12
NKX6-3A6NJ46 RNU6-727P-201ENST00000363592 107 ntBASIC1.82□□□□□ -2.12
NKX6-3A6NJ46 SNORD114-6-201ENST00000364393 72 ntBASIC1.82□□□□□ -2.12
NKX6-3A6NJ46 RNU6-1164P-201ENST00000364428 107 ntBASIC1.82□□□□□ -2.12
NKX6-3A6NJ46 Y_RNA.529-201ENST00000384586 119 ntBASIC1.82□□□□□ -2.12
NKX6-3A6NJ46 RNU6-310P-201ENST00000384655 107 ntBASIC1.82□□□□□ -2.12
NKX6-3A6NJ46 Y_RNA.646-201ENST00000410980 101 ntBASIC1.82□□□□□ -2.12
NKX6-3A6NJ46 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.82□□□□□ -2.12
NKX6-3A6NJ46 USMG5P1-201ENST00000425964 177 ntBASIC1.82□□□□□ -2.12
NKX6-3A6NJ46 AC018634.1-201ENST00000437554 401 ntBASIC1.82□□□□□ -2.12
NKX6-3A6NJ46 AC245102.2-201ENST00000448956 180 ntBASIC1.82□□□□□ -2.12
NKX6-3A6NJ46 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.82□□□□□ -2.12
NKX6-3A6NJ46 RNU6-277P-201ENST00000516272 106 ntBASIC1.82□□□□□ -2.12
NKX6-3A6NJ46 SCARNA16.3-201ENST00000516595 184 ntBASIC1.82□□□□□ -2.12
NKX6-3A6NJ46 RNU6-58P-201ENST00000517143 103 ntBASIC1.82□□□□□ -2.12
NKX6-3A6NJ46 RNU2-19P-201ENST00000517288 84 ntBASIC1.82□□□□□ -2.12
NKX6-3A6NJ46 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.82□□□□□ -2.12
NKX6-3A6NJ46 MIR1273D-201ENST00000577266 86 ntBASIC1.82□□□□□ -2.12
NKX6-3A6NJ46 AL627230.6-201ENST00000611129 280 ntBASIC1.82□□□□□ -2.12
NKX6-3A6NJ46 RMST_6.1-201ENST00000611980 203 ntBASIC1.82□□□□□ -2.12
NKX6-3A6NJ46 TCL6_2.1-201ENST00000615162 119 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 157 ms