Protein–RNA interactions for Protein: A6NCW0

USP17L3, Ubiquitin carboxyl-terminal hydrolase 17-like protein 3, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L3A6NCW0 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
USP17L3A6NCW0 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.19□□□□□ -1.74
USP17L3A6NCW0 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.19□□□□□ -1.74
USP17L3A6NCW0 AL356274.2-201ENST00000624379 3752 ntBASIC4.19□□□□□ -1.74
USP17L3A6NCW0 AC000403.1-201ENST00000613696 3585 ntBASIC4.19□□□□□ -1.74
USP17L3A6NCW0 RNA5SP374-201ENST00000362939 125 ntBASIC4.19□□□□□ -1.74
USP17L3A6NCW0 Y_RNA.361-201ENST00000365515 120 ntBASIC4.19□□□□□ -1.74
USP17L3A6NCW0 RNU6-1117P-201ENST00000384525 104 ntBASIC4.19□□□□□ -1.74
USP17L3A6NCW0 MIR548B-201ENST00000385247 97 ntBASIC4.19□□□□□ -1.74
USP17L3A6NCW0 RNA5SP354-201ENST00000391247 136 ntBASIC4.19□□□□□ -1.74
USP17L3A6NCW0 HMGN2P8-201ENST00000391458 268 ntBASIC4.19□□□□□ -1.74
USP17L3A6NCW0 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC4.19□□□□□ -1.74
USP17L3A6NCW0 FCF1P8-201ENST00000510322 597 ntBASIC4.19□□□□□ -1.74
USP17L3A6NCW0 RNU5F-4P-201ENST00000516581 114 ntBASIC4.19□□□□□ -1.74
USP17L3A6NCW0 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC4.19□□□□□ -1.74
USP17L3A6NCW0 AC021269.2-201ENST00000532318 330 ntBASIC4.19□□□□□ -1.74
USP17L3A6NCW0 MIR4325-201ENST00000583049 90 ntBASIC4.19□□□□□ -1.74
USP17L3A6NCW0 RPL30P11-203ENST00000598995 310 ntBASIC4.19□□□□□ -1.74
USP17L3A6NCW0 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
USP17L3A6NCW0 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.18□□□□□ -1.74
USP17L3A6NCW0 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC4.18□□□□□ -1.74
USP17L3A6NCW0 MFSD8-233ENST00000641482 4860 ntBASIC4.18□□□□□ -1.74
USP17L3A6NCW0 Z83843.1-201ENST00000604070 3685 ntBASIC4.18□□□□□ -1.74
USP17L3A6NCW0 SNORD32B-201ENST00000364460 84 ntBASIC4.18□□□□□ -1.74
USP17L3A6NCW0 Y_RNA.497-201ENST00000384447 98 ntBASIC4.18□□□□□ -1.74
USP17L3A6NCW0 RNA5SP112-201ENST00000515937 99 ntBASIC4.18□□□□□ -1.74
USP17L3A6NCW0 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC4.18□□□□□ -1.74
USP17L3A6NCW0 AC103810.1-201ENST00000579873 453 ntBASIC4.18□□□□□ -1.74
USP17L3A6NCW0 MIR4744-201ENST00000581563 82 ntBASIC4.18□□□□□ -1.74
USP17L3A6NCW0 MIR4765-201ENST00000585007 77 ntBASIC4.18□□□□□ -1.74
USP17L3A6NCW0 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC4.18□□□□□ -1.74
USP17L3A6NCW0 AC069294.1-201ENST00000608397 350 ntBASIC4.18□□□□□ -1.74
USP17L3A6NCW0 Y_RNA.802-201ENST00000614892 130 ntBASIC4.18□□□□□ -1.74
USP17L3A6NCW0 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC4.18□□□□□ -1.74
USP17L3A6NCW0 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
USP17L3A6NCW0 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
USP17L3A6NCW0 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.17□□□□□ -1.74
USP17L3A6NCW0 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.17□□□□□ -1.74
USP17L3A6NCW0 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
USP17L3A6NCW0 AC134026.1-201ENST00000623249 2239 ntBASIC4.17□□□□□ -1.74
USP17L3A6NCW0 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
USP17L3A6NCW0 CR769767.1-201ENST00000436337 346 ntBASIC4.17□□□□□ -1.74
USP17L3A6NCW0 AC006028.1-201ENST00000438379 402 ntBASIC4.17□□□□□ -1.74
USP17L3A6NCW0 RN7SL594P-201ENST00000470590 287 ntBASIC4.17□□□□□ -1.74
USP17L3A6NCW0 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC4.17□□□□□ -1.74
USP17L3A6NCW0 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC4.17□□□□□ -1.74
USP17L3A6NCW0 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC4.17□□□□□ -1.74
USP17L3A6NCW0 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC4.17□□□□□ -1.74
USP17L3A6NCW0 MIR5004-201ENST00000579078 107 ntBASIC4.17□□□□□ -1.74
USP17L3A6NCW0 MIR4276-201ENST00000584832 70 ntBASIC4.17□□□□□ -1.74
USP17L3A6NCW0 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC4.17□□□□□ -1.74
USP17L3A6NCW0 AC091895.1-201ENST00000624494 256 ntBASIC4.17□□□□□ -1.74
USP17L3A6NCW0 AC090517.3-201ENST00000625170 141 ntBASIC4.17□□□□□ -1.74
USP17L3A6NCW0 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.17□□□□□ -1.74
USP17L3A6NCW0 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
USP17L3A6NCW0 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
USP17L3A6NCW0 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.16□□□□□ -1.74
USP17L3A6NCW0 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
USP17L3A6NCW0 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
USP17L3A6NCW0 AP002088.1-201ENST00000382740 395 ntBASIC4.16□□□□□ -1.74
USP17L3A6NCW0 MIR626-201ENST00000385032 94 ntBASIC4.16□□□□□ -1.74
USP17L3A6NCW0 RNU6-239P-201ENST00000390990 99 ntBASIC4.16□□□□□ -1.74
USP17L3A6NCW0 AL162725.1-201ENST00000435405 301 ntBASIC4.16□□□□□ -1.74
USP17L3A6NCW0 AC074290.1-201ENST00000448883 135 ntBASIC4.16□□□□□ -1.74
USP17L3A6NCW0 HMGN2P7-201ENST00000456186 273 ntBASIC4.16□□□□□ -1.74
USP17L3A6NCW0 AL049830.2-201ENST00000480072 201 ntBASIC4.16□□□□□ -1.74
USP17L3A6NCW0 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC4.16□□□□□ -1.74
USP17L3A6NCW0 RN7SKP83-201ENST00000516512 178 ntBASIC4.16□□□□□ -1.74
USP17L3A6NCW0 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC4.16□□□□□ -1.74
USP17L3A6NCW0 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC4.16□□□□□ -1.74
USP17L3A6NCW0 MIR486-1-201ENST00000612171 68 ntBASIC4.16□□□□□ -1.74
USP17L3A6NCW0 Y_RNA.778-201ENST00000620203 90 ntBASIC4.16□□□□□ -1.74
USP17L3A6NCW0 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
USP17L3A6NCW0 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
USP17L3A6NCW0 RNU6-1048P-201ENST00000364054 107 ntBASIC4.15□□□□□ -1.75
USP17L3A6NCW0 Y_RNA.215-201ENST00000364204 112 ntBASIC4.15□□□□□ -1.75
USP17L3A6NCW0 RNA5SP42-201ENST00000364278 115 ntBASIC4.15□□□□□ -1.75
USP17L3A6NCW0 RNU6-1083P-201ENST00000384022 107 ntBASIC4.15□□□□□ -1.75
USP17L3A6NCW0 Y_RNA.568-201ENST00000384742 113 ntBASIC4.15□□□□□ -1.75
USP17L3A6NCW0 RNU6-578P-201ENST00000390980 103 ntBASIC4.15□□□□□ -1.75
USP17L3A6NCW0 HMGN2P9-201ENST00000476875 229 ntBASIC4.15□□□□□ -1.75
USP17L3A6NCW0 RPS27P26-201ENST00000494583 239 ntBASIC4.15□□□□□ -1.75
USP17L3A6NCW0 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.15□□□□□ -1.75
USP17L3A6NCW0 MIR4474-201ENST00000579189 78 ntBASIC4.15□□□□□ -1.75
USP17L3A6NCW0 AC025754.2-201ENST00000606491 432 ntBASIC4.15□□□□□ -1.75
USP17L3A6NCW0 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.15□□□□□ -1.75
USP17L3A6NCW0 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
USP17L3A6NCW0 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC4.15□□□□□ -1.75
USP17L3A6NCW0 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
USP17L3A6NCW0 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
USP17L3A6NCW0 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
USP17L3A6NCW0 RNU6-1205P-201ENST00000363625 106 ntBASIC4.14□□□□□ -1.75
USP17L3A6NCW0 Y_RNA.310-201ENST00000365063 113 ntBASIC4.14□□□□□ -1.75
USP17L3A6NCW0 MIR1185-2-201ENST00000408687 86 ntBASIC4.14□□□□□ -1.75
USP17L3A6NCW0 SRI-210ENST00000490437 570 ntTSL 2 BASIC4.14□□□□□ -1.75
USP17L3A6NCW0 AC107027.2-201ENST00000512197 115 ntBASIC4.14□□□□□ -1.75
USP17L3A6NCW0 SNORD116-25-201ENST00000516517 92 ntBASIC4.14□□□□□ -1.75
USP17L3A6NCW0 RNU6-1098P-201ENST00000516772 96 ntBASIC4.14□□□□□ -1.75
USP17L3A6NCW0 RNU6-711P-201ENST00000517255 106 ntBASIC4.14□□□□□ -1.75
USP17L3A6NCW0 MIR4431-201ENST00000579990 94 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 197.9 ms