Protein–RNA interactions for Protein: A6NCS4

NKX2-6, Homeobox protein Nkx-2.6, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-6A6NCS4 Y_RNA.301-201ENST00000364990 103 ntBASIC1.48□□□□□ -2.17
NKX2-6A6NCS4 AL356776.1-201ENST00000406574 447 ntBASIC1.48□□□□□ -2.17
NKX2-6A6NCS4 MTCYBP2-201ENST00000407745 171 ntBASIC1.48□□□□□ -2.17
NKX2-6A6NCS4 RNU6ATAC25P-201ENST00000408798 117 ntBASIC1.48□□□□□ -2.17
NKX2-6A6NCS4 AC009161.1-201ENST00000417306 376 ntBASIC1.48□□□□□ -2.17
NKX2-6A6NCS4 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.48□□□□□ -2.17
NKX2-6A6NCS4 AC092473.1-201ENST00000441098 221 ntBASIC1.48□□□□□ -2.17
NKX2-6A6NCS4 HMGN2P18-201ENST00000450680 270 ntBASIC1.48□□□□□ -2.17
NKX2-6A6NCS4 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC1.48□□□□□ -2.17
NKX2-6A6NCS4 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.48□□□□□ -2.17
NKX2-6A6NCS4 AL137159.1-201ENST00000452808 512 ntBASIC1.48□□□□□ -2.17
NKX2-6A6NCS4 FO393415.2-201ENST00000480085 343 ntBASIC1.48□□□□□ -2.17
NKX2-6A6NCS4 AF186996.7-201ENST00000492781 209 ntBASIC1.48□□□□□ -2.17
NKX2-6A6NCS4 Y_RNA.682-201ENST00000516457 100 ntBASIC1.48□□□□□ -2.17
NKX2-6A6NCS4 RNU6-358P-201ENST00000516564 75 ntBASIC1.48□□□□□ -2.17
NKX2-6A6NCS4 HSBP1P1-201ENST00000555205 166 ntBASIC1.48□□□□□ -2.17
NKX2-6A6NCS4 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.48□□□□□ -2.17
NKX2-6A6NCS4 AC018638.8-201ENST00000588755 281 ntBASIC1.48□□□□□ -2.17
NKX2-6A6NCS4 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.48□□□□□ -2.17
NKX2-6A6NCS4 AP003465.2-201ENST00000602571 373 ntBASIC1.48□□□□□ -2.17
NKX2-6A6NCS4 AL356157.2-201ENST00000605122 111 ntBASIC1.48□□□□□ -2.17
NKX2-6A6NCS4 AC019193.3-201ENST00000609144 554 ntBASIC1.48□□□□□ -2.17
NKX2-6A6NCS4 AL512598.1-201ENST00000610158 273 ntBASIC1.48□□□□□ -2.17
NKX2-6A6NCS4 MIR8076-201ENST00000611401 83 ntBASIC1.48□□□□□ -2.17
NKX2-6A6NCS4 U6atac.1-201ENST00000616025 117 ntBASIC1.48□□□□□ -2.17
NKX2-6A6NCS4 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
NKX2-6A6NCS4 CASC19-280ENST00000642102 1351 ntBASIC1.47□□□□□ -2.17
NKX2-6A6NCS4 ZNF702P-202ENST00000434269 1966 ntBASIC1.47□□□□□ -2.17
NKX2-6A6NCS4 RNA5SP276-201ENST00000362580 94 ntBASIC1.47□□□□□ -2.17
NKX2-6A6NCS4 SNORD50.1-201ENST00000362987 71 ntBASIC1.47□□□□□ -2.17
NKX2-6A6NCS4 Y_RNA.118-201ENST00000363300 101 ntBASIC1.47□□□□□ -2.17
NKX2-6A6NCS4 RNU6-968P-201ENST00000384076 107 ntBASIC1.47□□□□□ -2.17
NKX2-6A6NCS4 RNU6-611P-201ENST00000384276 104 ntBASIC1.47□□□□□ -2.17
NKX2-6A6NCS4 HMGN2P39-201ENST00000398005 273 ntBASIC1.47□□□□□ -2.17
NKX2-6A6NCS4 RNA5SP118-201ENST00000410385 109 ntBASIC1.47□□□□□ -2.17
NKX2-6A6NCS4 BX510359.4-201ENST00000423750 193 ntBASIC1.47□□□□□ -2.17
NKX2-6A6NCS4 RNU6-329P-201ENST00000459618 107 ntBASIC1.47□□□□□ -2.17
NKX2-6A6NCS4 MTCO2P30-201ENST00000503662 364 ntBASIC1.47□□□□□ -2.17
NKX2-6A6NCS4 AC093259.1-201ENST00000509755 300 ntBASIC1.47□□□□□ -2.17
NKX2-6A6NCS4 ATP5EP1-201ENST00000510257 156 ntBASIC1.47□□□□□ -2.17
NKX2-6A6NCS4 RNU6-1098P-201ENST00000516772 96 ntBASIC1.47□□□□□ -2.17
NKX2-6A6NCS4 RNU6-566P-201ENST00000516790 107 ntBASIC1.47□□□□□ -2.17
NKX2-6A6NCS4 RNA5SP454-201ENST00000517231 127 ntBASIC1.47□□□□□ -2.17
NKX2-6A6NCS4 AP005660.1-201ENST00000522972 293 ntBASIC1.47□□□□□ -2.17
NKX2-6A6NCS4 AP005639.2-201ENST00000527592 928 ntBASIC1.47□□□□□ -2.17
NKX2-6A6NCS4 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.47□□□□□ -2.17
NKX2-6A6NCS4 AC021231.3-201ENST00000558497 370 ntBASIC1.47□□□□□ -2.17
NKX2-6A6NCS4 CYP4A27P-201ENST00000567218 190 ntBASIC1.47□□□□□ -2.17
NKX2-6A6NCS4 MIR3618-201ENST00000580330 88 ntBASIC1.47□□□□□ -2.17
NKX2-6A6NCS4 AC060780.3-201ENST00000589464 80 ntBASIC1.47□□□□□ -2.17
NKX2-6A6NCS4 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.47□□□□□ -2.17
NKX2-6A6NCS4 AL645939.4-201ENST00000604495 135 ntBASIC1.47□□□□□ -2.17
NKX2-6A6NCS4 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.47□□□□□ -2.17
NKX2-6A6NCS4 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
NKX2-6A6NCS4 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.46□□□□□ -2.18
NKX2-6A6NCS4 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
NKX2-6A6NCS4 Y_RNA.48-201ENST00000362710 103 ntBASIC1.46□□□□□ -2.18
NKX2-6A6NCS4 RNU5B-2P-201ENST00000363036 113 ntBASIC1.46□□□□□ -2.18
NKX2-6A6NCS4 U3.9-201ENST00000363823 204 ntBASIC1.46□□□□□ -2.18
NKX2-6A6NCS4 RNU1-42P-201ENST00000364033 160 ntBASIC1.46□□□□□ -2.18
NKX2-6A6NCS4 RNA5SP363-201ENST00000365072 115 ntBASIC1.46□□□□□ -2.18
NKX2-6A6NCS4 SNORA25.9-201ENST00000365087 128 ntBASIC1.46□□□□□ -2.18
NKX2-6A6NCS4 RNU6-1286P-201ENST00000383871 107 ntBASIC1.46□□□□□ -2.18
NKX2-6A6NCS4 RNU6-26P-201ENST00000383985 107 ntBASIC1.46□□□□□ -2.18
NKX2-6A6NCS4 RNU6-997P-201ENST00000384725 107 ntBASIC1.46□□□□□ -2.18
NKX2-6A6NCS4 SNORA12.2-201ENST00000391040 156 ntBASIC1.46□□□□□ -2.18
NKX2-6A6NCS4 RNA5SP494-201ENST00000410653 129 ntBASIC1.46□□□□□ -2.18
NKX2-6A6NCS4 CBX3P6-201ENST00000430257 527 ntBASIC1.46□□□□□ -2.18
NKX2-6A6NCS4 MTND1P2-201ENST00000430604 821 ntBASIC1.46□□□□□ -2.18
NKX2-6A6NCS4 AL445305.1-201ENST00000432577 575 ntBASIC1.46□□□□□ -2.18
NKX2-6A6NCS4 Z82188.1-201ENST00000436709 154 ntBASIC1.46□□□□□ -2.18
NKX2-6A6NCS4 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.46□□□□□ -2.18
NKX2-6A6NCS4 MTATP6P13-201ENST00000438531 667 ntBASIC1.46□□□□□ -2.18
NKX2-6A6NCS4 MTND4LP16-201ENST00000440828 295 ntBASIC1.46□□□□□ -2.18
NKX2-6A6NCS4 AL353572.1-201ENST00000442490 417 ntBASIC1.46□□□□□ -2.18
NKX2-6A6NCS4 SNRPEP8-201ENST00000442866 260 ntBASIC1.46□□□□□ -2.18
NKX2-6A6NCS4 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.46□□□□□ -2.18
NKX2-6A6NCS4 FGF7P6-202ENST00000451282 293 ntBASIC1.46□□□□□ -2.18
NKX2-6A6NCS4 RPL23AP3-201ENST00000453844 468 ntBASIC1.46□□□□□ -2.18
NKX2-6A6NCS4 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.46□□□□□ -2.18
NKX2-6A6NCS4 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.46□□□□□ -2.18
NKX2-6A6NCS4 DEFB131C-201ENST00000528817 165 ntBASIC1.46□□□□□ -2.18
NKX2-6A6NCS4 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
NKX2-6A6NCS4 AC018630.3-201ENST00000542637 96 ntBASIC1.46□□□□□ -2.18
NKX2-6A6NCS4 EIF4A1P12-201ENST00000551910 141 ntBASIC1.46□□□□□ -2.18
NKX2-6A6NCS4 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC1.46□□□□□ -2.18
NKX2-6A6NCS4 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.46□□□□□ -2.18
NKX2-6A6NCS4 AC090517.1-201ENST00000569307 266 ntBASIC1.46□□□□□ -2.18
NKX2-6A6NCS4 SNORD53B-201ENST00000577887 78 ntBASIC1.46□□□□□ -2.18
NKX2-6A6NCS4 SNORA59B-202ENST00000578183 701 ntBASIC1.46□□□□□ -2.18
NKX2-6A6NCS4 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.46□□□□□ -2.18
NKX2-6A6NCS4 MIR4742-201ENST00000581069 85 ntBASIC1.46□□□□□ -2.18
NKX2-6A6NCS4 POLR3GP2-201ENST00000588366 668 ntBASIC1.46□□□□□ -2.18
NKX2-6A6NCS4 SNRPGP17-201ENST00000603780 214 ntBASIC1.46□□□□□ -2.18
NKX2-6A6NCS4 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.46□□□□□ -2.18
NKX2-6A6NCS4 MIR6128-201ENST00000615528 109 ntBASIC1.46□□□□□ -2.18
NKX2-6A6NCS4 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
NKX2-6A6NCS4 AC233981.2-201ENST00000611524 1614 ntBASIC1.46□□□□□ -2.18
NKX2-6A6NCS4 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.45□□□□□ -2.18
NKX2-6A6NCS4 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 142.6 ms