Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 MRPL42P2-201ENST00000403169 426 ntBASIC0.2□□□□□ -2.38
TRAV4A0A0B4J268 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC0.2□□□□□ -2.38
TRAV4A0A0B4J268 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC0.2□□□□□ -2.38
TRAV4A0A0B4J268 AL031313.1-201ENST00000448435 256 ntBASIC0.2□□□□□ -2.38
TRAV4A0A0B4J268 ZNF736P4Y-201ENST00000454995 1243 ntBASIC0.2□□□□□ -2.38
TRAV4A0A0B4J268 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.2□□□□□ -2.38
TRAV4A0A0B4J268 AC025465.4-201ENST00000513422 638 ntBASIC0.2□□□□□ -2.38
TRAV4A0A0B4J268 LRRC34P2-201ENST00000514850 553 ntBASIC0.2□□□□□ -2.38
TRAV4A0A0B4J268 RNA5SP220-201ENST00000516298 104 ntBASIC0.2□□□□□ -2.38
TRAV4A0A0B4J268 DEFB131C-201ENST00000528817 165 ntBASIC0.2□□□□□ -2.38
TRAV4A0A0B4J268 MIR4778-201ENST00000577635 80 ntBASIC0.2□□□□□ -2.38
TRAV4A0A0B4J268 AC097065.2-201ENST00000608159 533 ntBASIC0.2□□□□□ -2.38
TRAV4A0A0B4J268 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC0.2□□□□□ -2.38
TRAV4A0A0B4J268 AC005562.2-201ENST00000618264 111 ntBASIC0.2□□□□□ -2.38
TRAV4A0A0B4J268 Y_RNA.302-201ENST00000364997 102 ntBASIC0.19□□□□□ -2.38
TRAV4A0A0B4J268 SNORA2.2-201ENST00000365473 135 ntBASIC0.19□□□□□ -2.38
TRAV4A0A0B4J268 Y_RNA.576-201ENST00000384781 102 ntBASIC0.19□□□□□ -2.38
TRAV4A0A0B4J268 SNORD89-201ENST00000390981 114 ntBASIC0.19□□□□□ -2.38
TRAV4A0A0B4J268 RNU6-757P-201ENST00000410334 100 ntBASIC0.19□□□□□ -2.38
TRAV4A0A0B4J268 RPS27AP14-201ENST00000422868 454 ntBASIC0.19□□□□□ -2.38
TRAV4A0A0B4J268 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC0.19□□□□□ -2.38
TRAV4A0A0B4J268 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC0.19□□□□□ -2.38
TRAV4A0A0B4J268 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC0.19□□□□□ -2.38
TRAV4A0A0B4J268 AC245047.8-201ENST00000456455 284 ntBASIC0.19□□□□□ -2.38
TRAV4A0A0B4J268 AK3P2-201ENST00000507976 429 ntBASIC0.19□□□□□ -2.38
TRAV4A0A0B4J268 AC091874.1-201ENST00000511402 339 ntBASIC0.19□□□□□ -2.38
TRAV4A0A0B4J268 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.19□□□□□ -2.38
TRAV4A0A0B4J268 RNU6-405P-201ENST00000516637 110 ntBASIC0.19□□□□□ -2.38
TRAV4A0A0B4J268 RNU6-467P-201ENST00000517027 110 ntBASIC0.19□□□□□ -2.38
TRAV4A0A0B4J268 AC105185.1-201ENST00000518705 535 ntBASIC0.19□□□□□ -2.38
TRAV4A0A0B4J268 MIR4711-201ENST00000578274 70 ntBASIC0.19□□□□□ -2.38
TRAV4A0A0B4J268 MIR5093-201ENST00000583199 100 ntBASIC0.19□□□□□ -2.38
TRAV4A0A0B4J268 MPP6-209ENST00000625307 126 ntTSL 5 BASIC0.19□□□□□ -2.38
TRAV4A0A0B4J268 U6.108-201ENST00000637764 58 ntBASIC0.19□□□□□ -2.38
TRAV4A0A0B4J268 AC090625.1-201ENST00000357130 210 ntBASIC0.18□□□□□ -2.38
TRAV4A0A0B4J268 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.18□□□□□ -2.38
TRAV4A0A0B4J268 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.18□□□□□ -2.38
TRAV4A0A0B4J268 MIR936-201ENST00000401264 98 ntBASIC0.18□□□□□ -2.38
TRAV4A0A0B4J268 RNU2-8P-201ENST00000410727 190 ntBASIC0.18□□□□□ -2.38
TRAV4A0A0B4J268 EXOSC3P1-201ENST00000448649 500 ntBASIC0.18□□□□□ -2.38
TRAV4A0A0B4J268 Y_RNA.676-201ENST00000516393 96 ntBASIC0.18□□□□□ -2.38
TRAV4A0A0B4J268 AP002001.1-203ENST00000534002 267 ntBASIC0.18□□□□□ -2.38
TRAV4A0A0B4J268 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.18□□□□□ -2.38
TRAV4A0A0B4J268 AC026470.2-201ENST00000561492 181 ntBASIC0.18□□□□□ -2.38
TRAV4A0A0B4J268 AC004584.2-201ENST00000570407 410 ntBASIC0.18□□□□□ -2.38
TRAV4A0A0B4J268 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC0.18□□□□□ -2.38
TRAV4A0A0B4J268 MTND1P15-201ENST00000579262 949 ntBASIC0.18□□□□□ -2.38
TRAV4A0A0B4J268 MIR5006-201ENST00000583027 110 ntBASIC0.18□□□□□ -2.38
TRAV4A0A0B4J268 AL359999.1-201ENST00000604513 294 ntBASIC0.18□□□□□ -2.38
TRAV4A0A0B4J268 AP001836.1-201ENST00000604675 523 ntBASIC0.18□□□□□ -2.38
TRAV4A0A0B4J268 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC0.18□□□□□ -2.38
TRAV4A0A0B4J268 AC093913.1-201ENST00000614178 329 ntBASIC0.18□□□□□ -2.38
TRAV4A0A0B4J268 TCL6_2.1-201ENST00000615162 119 ntBASIC0.18□□□□□ -2.38
TRAV4A0A0B4J268 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.18□□□□□ -2.38
TRAV4A0A0B4J268 AL589743.1-201ENST00000551932 2712 ntBASIC0.17□□□□□ -2.38
TRAV4A0A0B4J268 Y_RNA.22-201ENST00000362492 102 ntBASIC0.17□□□□□ -2.38
TRAV4A0A0B4J268 RNU1-119P-201ENST00000391122 165 ntBASIC0.17□□□□□ -2.38
TRAV4A0A0B4J268 CDK8P2-201ENST00000415020 547 ntBASIC0.17□□□□□ -2.38
TRAV4A0A0B4J268 AL117339.3-201ENST00000418733 162 ntBASIC0.17□□□□□ -2.38
TRAV4A0A0B4J268 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC0.17□□□□□ -2.38
TRAV4A0A0B4J268 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC0.17□□□□□ -2.38
TRAV4A0A0B4J268 AC004386.2-201ENST00000441858 148 ntBASIC0.17□□□□□ -2.38
TRAV4A0A0B4J268 LINC01399-202ENST00000458450 244 ntBASIC0.17□□□□□ -2.38
TRAV4A0A0B4J268 AC116562.3-201ENST00000506136 177 ntBASIC0.17□□□□□ -2.38
TRAV4A0A0B4J268 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC0.17□□□□□ -2.38
TRAV4A0A0B4J268 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.17□□□□□ -2.38
TRAV4A0A0B4J268 RNU6-917P-201ENST00000516294 104 ntBASIC0.17□□□□□ -2.38
TRAV4A0A0B4J268 AC106038.2-201ENST00000520706 568 ntBASIC0.17□□□□□ -2.38
TRAV4A0A0B4J268 AC027419.1-201ENST00000522976 328 ntBASIC0.17□□□□□ -2.38
TRAV4A0A0B4J268 AC068587.5-201ENST00000528506 175 ntBASIC0.17□□□□□ -2.38
TRAV4A0A0B4J268 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.17□□□□□ -2.38
TRAV4A0A0B4J268 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC0.17□□□□□ -2.38
TRAV4A0A0B4J268 7SK.10-201ENST00000621414 298 ntBASIC0.17□□□□□ -2.38
TRAV4A0A0B4J268 SNORA43.4-201ENST00000629559 138 ntBASIC0.17□□□□□ -2.38
TRAV4A0A0B4J268 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.16□□□□□ -2.38
TRAV4A0A0B4J268 RNU4-92P-201ENST00000363783 136 ntBASIC0.16□□□□□ -2.38
TRAV4A0A0B4J268 RNU6-931P-201ENST00000363850 107 ntBASIC0.16□□□□□ -2.38
TRAV4A0A0B4J268 SNORD115-7-201ENST00000365306 82 ntBASIC0.16□□□□□ -2.38
TRAV4A0A0B4J268 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.16□□□□□ -2.38
TRAV4A0A0B4J268 RNU6-348P-201ENST00000384386 107 ntBASIC0.16□□□□□ -2.38
TRAV4A0A0B4J268 RNU6-1067P-201ENST00000384752 107 ntBASIC0.16□□□□□ -2.38
TRAV4A0A0B4J268 SNORA12.1-201ENST00000390873 148 ntBASIC0.16□□□□□ -2.38
TRAV4A0A0B4J268 RNU6-57P-201ENST00000411348 103 ntBASIC0.16□□□□□ -2.38
TRAV4A0A0B4J268 MTND1P20-201ENST00000430341 950 ntBASIC0.16□□□□□ -2.38
TRAV4A0A0B4J268 AL031274.1-201ENST00000450334 232 ntBASIC0.16□□□□□ -2.38
TRAV4A0A0B4J268 RNU6-1178P-201ENST00000516674 107 ntBASIC0.16□□□□□ -2.38
TRAV4A0A0B4J268 NTS-203ENST00000551529 801 ntTSL 3 BASIC0.16□□□□□ -2.38
TRAV4A0A0B4J268 AC103996.1-201ENST00000555468 102 ntBASIC0.16□□□□□ -2.38
TRAV4A0A0B4J268 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC0.16□□□□□ -2.38
TRAV4A0A0B4J268 MIR6734-201ENST00000621166 68 ntBASIC0.16□□□□□ -2.38
TRAV4A0A0B4J268 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.16□□□□□ -2.38
TRAV4A0A0B4J268 AC013437.2-201ENST00000639587 677 ntBASIC0.16□□□□□ -2.38
TRAV4A0A0B4J268 RNU4-68P-201ENST00000364314 141 ntBASIC0.15□□□□□ -2.39
TRAV4A0A0B4J268 RNU6-533P-201ENST00000384144 107 ntBASIC0.15□□□□□ -2.39
TRAV4A0A0B4J268 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.15□□□□□ -2.39
TRAV4A0A0B4J268 MTND3P17-201ENST00000416968 344 ntBASIC0.15□□□□□ -2.39
TRAV4A0A0B4J268 AC008134.1-201ENST00000420943 193 ntBASIC0.15□□□□□ -2.39
TRAV4A0A0B4J268 RPL23AP50-201ENST00000434149 455 ntBASIC0.15□□□□□ -2.39
TRAV4A0A0B4J268 AC005002.2-201ENST00000438228 269 ntBASIC0.15□□□□□ -2.39
TRAV4A0A0B4J268 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC0.15□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms