Protein–RNA interactions for Protein: R4GMX3

COMMD3-BMI1, COMMD3-BMI1 readthrough, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1R4GMX3 AL133373.1-201ENST00000497098 94 ntBASIC1.13□□□□□ -2.23
COMMD3-BMI1R4GMX3 HMGB1P29-201ENST00000505659 499 ntBASIC1.13□□□□□ -2.23
COMMD3-BMI1R4GMX3 SNORA14.1-201ENST00000516113 141 ntBASIC1.13□□□□□ -2.23
COMMD3-BMI1R4GMX3 RNU6-856P-201ENST00000516959 98 ntBASIC1.13□□□□□ -2.23
COMMD3-BMI1R4GMX3 RNU1-92P-201ENST00000517017 135 ntBASIC1.13□□□□□ -2.23
COMMD3-BMI1R4GMX3 AC087854.1-201ENST00000519706 414 ntBASIC1.13□□□□□ -2.23
COMMD3-BMI1R4GMX3 CYP3A52P-201ENST00000563326 91 ntBASIC1.13□□□□□ -2.23
COMMD3-BMI1R4GMX3 AC090517.1-201ENST00000569307 266 ntBASIC1.13□□□□□ -2.23
COMMD3-BMI1R4GMX3 AC015688.6-201ENST00000577737 104 ntBASIC1.13□□□□□ -2.23
COMMD3-BMI1R4GMX3 MTATP6P3-201ENST00000581686 676 ntBASIC1.13□□□□□ -2.23
COMMD3-BMI1R4GMX3 AC004223.2-201ENST00000590309 544 ntBASIC1.13□□□□□ -2.23
COMMD3-BMI1R4GMX3 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.13□□□□□ -2.23
COMMD3-BMI1R4GMX3 AC136475.10-201ENST00000620253 385 ntBASIC1.13□□□□□ -2.23
COMMD3-BMI1R4GMX3 Z69908.1-201ENST00000622603 247 ntBASIC1.13□□□□□ -2.23
COMMD3-BMI1R4GMX3 SNORA43.4-201ENST00000629559 138 ntBASIC1.13□□□□□ -2.23
COMMD3-BMI1R4GMX3 AC099654.5-201ENST00000636479 350 ntBASIC1.13□□□□□ -2.23
COMMD3-BMI1R4GMX3 RNU6-227P-201ENST00000362865 103 ntBASIC1.12□□□□□ -2.23
COMMD3-BMI1R4GMX3 Y_RNA.159-201ENST00000363674 87 ntBASIC1.12□□□□□ -2.23
COMMD3-BMI1R4GMX3 Y_RNA.169-201ENST00000363745 96 ntBASIC1.12□□□□□ -2.23
COMMD3-BMI1R4GMX3 MIR515-2-201ENST00000384883 83 ntBASIC1.12□□□□□ -2.23
COMMD3-BMI1R4GMX3 MIR515-1-201ENST00000384884 83 ntBASIC1.12□□□□□ -2.23
COMMD3-BMI1R4GMX3 MIR548B-201ENST00000385247 97 ntBASIC1.12□□□□□ -2.23
COMMD3-BMI1R4GMX3 RN7SKP142-201ENST00000411236 328 ntBASIC1.12□□□□□ -2.23
COMMD3-BMI1R4GMX3 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.12□□□□□ -2.23
COMMD3-BMI1R4GMX3 AL591704.2-201ENST00000421658 181 ntBASIC1.12□□□□□ -2.23
COMMD3-BMI1R4GMX3 AC073464.1-201ENST00000429823 534 ntBASIC1.12□□□□□ -2.23
COMMD3-BMI1R4GMX3 MTCO3P29-201ENST00000432119 779 ntBASIC1.12□□□□□ -2.23
COMMD3-BMI1R4GMX3 AC245047.4-201ENST00000433189 144 ntBASIC1.12□□□□□ -2.23
COMMD3-BMI1R4GMX3 AC099677.2-201ENST00000436385 175 ntBASIC1.12□□□□□ -2.23
COMMD3-BMI1R4GMX3 PGBD4P5-201ENST00000445958 426 ntBASIC1.12□□□□□ -2.23
COMMD3-BMI1R4GMX3 AC073415.1-201ENST00000449240 153 ntBASIC1.12□□□□□ -2.23
COMMD3-BMI1R4GMX3 U8.21-201ENST00000459536 136 ntBASIC1.12□□□□□ -2.23
COMMD3-BMI1R4GMX3 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
COMMD3-BMI1R4GMX3 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.12□□□□□ -2.23
COMMD3-BMI1R4GMX3 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.12□□□□□ -2.23
COMMD3-BMI1R4GMX3 MIR3660-201ENST00000584845 100 ntBASIC1.12□□□□□ -2.23
COMMD3-BMI1R4GMX3 AP003465.2-201ENST00000602571 373 ntBASIC1.12□□□□□ -2.23
COMMD3-BMI1R4GMX3 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.12□□□□□ -2.23
COMMD3-BMI1R4GMX3 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.12□□□□□ -2.23
COMMD3-BMI1R4GMX3 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.12□□□□□ -2.23
COMMD3-BMI1R4GMX3 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
COMMD3-BMI1R4GMX3 RNY1P10-201ENST00000363268 113 ntBASIC1.11□□□□□ -2.23
COMMD3-BMI1R4GMX3 RNU1-96P-201ENST00000364163 162 ntBASIC1.11□□□□□ -2.23
COMMD3-BMI1R4GMX3 SNORA63D-201ENST00000364359 132 ntBASIC1.11□□□□□ -2.23
COMMD3-BMI1R4GMX3 SNORA72.2-201ENST00000365028 127 ntBASIC1.11□□□□□ -2.23
COMMD3-BMI1R4GMX3 SNORA40.6-201ENST00000391153 128 ntBASIC1.11□□□□□ -2.23
COMMD3-BMI1R4GMX3 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.11□□□□□ -2.23
COMMD3-BMI1R4GMX3 CETN4P-201ENST00000432407 469 ntBASIC1.11□□□□□ -2.23
COMMD3-BMI1R4GMX3 USP9YP28-201ENST00000435142 589 ntBASIC1.11□□□□□ -2.23
COMMD3-BMI1R4GMX3 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC1.11□□□□□ -2.23
COMMD3-BMI1R4GMX3 AC010531.2-201ENST00000465012 153 ntBASIC1.11□□□□□ -2.23
COMMD3-BMI1R4GMX3 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.11□□□□□ -2.23
COMMD3-BMI1R4GMX3 MIR4528-201ENST00000577763 90 ntBASIC1.11□□□□□ -2.23
COMMD3-BMI1R4GMX3 MIR4424-201ENST00000585257 86 ntBASIC1.11□□□□□ -2.23
COMMD3-BMI1R4GMX3 AC121247.2-201ENST00000604776 136 ntBASIC1.11□□□□□ -2.23
COMMD3-BMI1R4GMX3 AC103810.9-201ENST00000606688 112 ntBASIC1.11□□□□□ -2.23
COMMD3-BMI1R4GMX3 MIR3976-201ENST00000606807 139 ntBASIC1.11□□□□□ -2.23
COMMD3-BMI1R4GMX3 AC137590.2-201ENST00000619709 240 ntBASIC1.11□□□□□ -2.23
COMMD3-BMI1R4GMX3 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.11□□□□□ -2.23
COMMD3-BMI1R4GMX3 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
COMMD3-BMI1R4GMX3 AC009541.1-201ENST00000438279 2662 ntBASIC1.11□□□□□ -2.23
COMMD3-BMI1R4GMX3 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.1□□□□□ -2.23
COMMD3-BMI1R4GMX3 AL606923.1-201ENST00000406616 190 ntBASIC1.1□□□□□ -2.23
COMMD3-BMI1R4GMX3 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.1□□□□□ -2.23
COMMD3-BMI1R4GMX3 SNX2P2-201ENST00000424553 323 ntBASIC1.1□□□□□ -2.23
COMMD3-BMI1R4GMX3 AL358934.1-201ENST00000432346 324 ntBASIC1.1□□□□□ -2.23
COMMD3-BMI1R4GMX3 AL031667.1-201ENST00000440222 725 ntBASIC1.1□□□□□ -2.23
COMMD3-BMI1R4GMX3 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.1□□□□□ -2.23
COMMD3-BMI1R4GMX3 RNU7-95P-201ENST00000459222 64 ntBASIC1.1□□□□□ -2.23
COMMD3-BMI1R4GMX3 AC114982.1-201ENST00000469402 321 ntBASIC1.1□□□□□ -2.23
COMMD3-BMI1R4GMX3 AC091885.1-201ENST00000506658 268 ntBASIC1.1□□□□□ -2.23
COMMD3-BMI1R4GMX3 AC091874.1-201ENST00000511402 339 ntBASIC1.1□□□□□ -2.23
COMMD3-BMI1R4GMX3 RNU6-612P-201ENST00000516909 102 ntBASIC1.1□□□□□ -2.23
COMMD3-BMI1R4GMX3 AC084364.2-201ENST00000546924 395 ntBASIC1.1□□□□□ -2.23
COMMD3-BMI1R4GMX3 MIR4421-201ENST00000578133 69 ntBASIC1.1□□□□□ -2.23
COMMD3-BMI1R4GMX3 HSPE1P19-201ENST00000603327 295 ntBASIC1.1□□□□□ -2.23
COMMD3-BMI1R4GMX3 AC063944.3-201ENST00000609969 533 ntBASIC1.1□□□□□ -2.23
COMMD3-BMI1R4GMX3 HULC.1-201ENST00000612720 240 ntBASIC1.1□□□□□ -2.23
COMMD3-BMI1R4GMX3 AL158063.1-201ENST00000615349 536 ntBASIC1.1□□□□□ -2.23
COMMD3-BMI1R4GMX3 AC103705.1-201ENST00000619013 241 ntBASIC1.1□□□□□ -2.23
COMMD3-BMI1R4GMX3 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.09□□□□□ -2.23
COMMD3-BMI1R4GMX3 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.09□□□□□ -2.23
COMMD3-BMI1R4GMX3 RNU6-877P-201ENST00000383868 107 ntBASIC1.09□□□□□ -2.23
COMMD3-BMI1R4GMX3 RNU6-348P-201ENST00000384386 107 ntBASIC1.09□□□□□ -2.23
COMMD3-BMI1R4GMX3 AC090960.1-201ENST00000421072 306 ntBASIC1.09□□□□□ -2.23
COMMD3-BMI1R4GMX3 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.09□□□□□ -2.23
COMMD3-BMI1R4GMX3 AC074290.1-201ENST00000448883 135 ntBASIC1.09□□□□□ -2.23
COMMD3-BMI1R4GMX3 RNU6-189P-201ENST00000516120 101 ntBASIC1.09□□□□□ -2.23
COMMD3-BMI1R4GMX3 RNU6-1041P-201ENST00000516254 102 ntBASIC1.09□□□□□ -2.23
COMMD3-BMI1R4GMX3 RNU6-948P-201ENST00000516374 107 ntBASIC1.09□□□□□ -2.23
COMMD3-BMI1R4GMX3 Y_RNA.695-201ENST00000516715 107 ntBASIC1.09□□□□□ -2.23
COMMD3-BMI1R4GMX3 RNA5SP404-201ENST00000517118 132 ntBASIC1.09□□□□□ -2.23
COMMD3-BMI1R4GMX3 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.09□□□□□ -2.23
COMMD3-BMI1R4GMX3 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.09□□□□□ -2.23
COMMD3-BMI1R4GMX3 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC1.09□□□□□ -2.23
COMMD3-BMI1R4GMX3 SNORA59B-202ENST00000578183 701 ntBASIC1.09□□□□□ -2.23
COMMD3-BMI1R4GMX3 MIR4753-201ENST00000585119 83 ntBASIC1.09□□□□□ -2.23
COMMD3-BMI1R4GMX3 AC073648.5-201ENST00000603502 305 ntBASIC1.09□□□□□ -2.23
COMMD3-BMI1R4GMX3 AL359821.1-201ENST00000605519 182 ntBASIC1.09□□□□□ -2.23
COMMD3-BMI1R4GMX3 AC073114.1-201ENST00000612027 490 ntBASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms