Protein–RNA interactions for Protein: Q9Y6N9

USH1C, Harmonin, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1CQ9Y6N9 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC0.82□□□□□ -2.28
USH1CQ9Y6N9 MIR548AB-201ENST00000584917 84 ntBASIC0.82□□□□□ -2.28
USH1CQ9Y6N9 AL022161.1-201ENST00000604390 213 ntBASIC0.82□□□□□ -2.28
USH1CQ9Y6N9 AC064872.1-201ENST00000604823 1072 ntBASIC0.82□□□□□ -2.28
USH1CQ9Y6N9 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.82□□□□□ -2.28
USH1CQ9Y6N9 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC0.82□□□□□ -2.28
USH1CQ9Y6N9 SNORA43.4-201ENST00000629559 138 ntBASIC0.82□□□□□ -2.28
USH1CQ9Y6N9 HSBP1P2-201ENST00000299671 229 ntBASIC0.81□□□□□ -2.28
USH1CQ9Y6N9 RNU6-1123P-201ENST00000362347 106 ntBASIC0.81□□□□□ -2.28
USH1CQ9Y6N9 RNU6-562P-201ENST00000362731 107 ntBASIC0.81□□□□□ -2.28
USH1CQ9Y6N9 RNU6-534P-201ENST00000364877 106 ntBASIC0.81□□□□□ -2.28
USH1CQ9Y6N9 MIR515-2-201ENST00000384883 83 ntBASIC0.81□□□□□ -2.28
USH1CQ9Y6N9 MIR515-1-201ENST00000384884 83 ntBASIC0.81□□□□□ -2.28
USH1CQ9Y6N9 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
USH1CQ9Y6N9 RPS3AP3-201ENST00000411933 242 ntBASIC0.81□□□□□ -2.28
USH1CQ9Y6N9 AC013410.2-201ENST00000422627 201 ntBASIC0.81□□□□□ -2.28
USH1CQ9Y6N9 AL593851.1-201ENST00000426171 157 ntBASIC0.81□□□□□ -2.28
USH1CQ9Y6N9 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.81□□□□□ -2.28
USH1CQ9Y6N9 MTND2P39-201ENST00000457230 764 ntBASIC0.81□□□□□ -2.28
USH1CQ9Y6N9 AC010486.2-201ENST00000505572 483 ntBASIC0.81□□□□□ -2.28
USH1CQ9Y6N9 SNORD27.1-201ENST00000516319 72 ntBASIC0.81□□□□□ -2.28
USH1CQ9Y6N9 RNU2-34P-201ENST00000516534 121 ntBASIC0.81□□□□□ -2.28
USH1CQ9Y6N9 SCARNA1-201ENST00000517138 166 ntBASIC0.81□□□□□ -2.28
USH1CQ9Y6N9 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC0.81□□□□□ -2.28
USH1CQ9Y6N9 CBX3P8-201ENST00000532412 525 ntBASIC0.81□□□□□ -2.28
USH1CQ9Y6N9 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC0.81□□□□□ -2.28
USH1CQ9Y6N9 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.81□□□□□ -2.28
USH1CQ9Y6N9 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC0.81□□□□□ -2.28
USH1CQ9Y6N9 MIR3682-201ENST00000581338 84 ntBASIC0.81□□□□□ -2.28
USH1CQ9Y6N9 MIR4653-201ENST00000585107 83 ntBASIC0.81□□□□□ -2.28
USH1CQ9Y6N9 AC245884.10-201ENST00000597355 337 ntBASIC0.81□□□□□ -2.28
USH1CQ9Y6N9 Z84480.1-201ENST00000605131 311 ntBASIC0.81□□□□□ -2.28
USH1CQ9Y6N9 MIR6857-201ENST00000613267 93 ntBASIC0.81□□□□□ -2.28
USH1CQ9Y6N9 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
USH1CQ9Y6N9 RNU6-266P-201ENST00000364225 107 ntBASIC0.8□□□□□ -2.28
USH1CQ9Y6N9 MIR1-2-201ENST00000384961 85 ntBASIC0.8□□□□□ -2.28
USH1CQ9Y6N9 MIR532-201ENST00000385025 91 ntBASIC0.8□□□□□ -2.28
USH1CQ9Y6N9 SNORA16.2-201ENST00000390991 127 ntBASIC0.8□□□□□ -2.28
USH1CQ9Y6N9 RNU6-584P-201ENST00000410350 95 ntBASIC0.8□□□□□ -2.28
USH1CQ9Y6N9 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.8□□□□□ -2.28
USH1CQ9Y6N9 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.8□□□□□ -2.28
USH1CQ9Y6N9 AC016717.1-201ENST00000448918 286 ntBASIC0.8□□□□□ -2.28
USH1CQ9Y6N9 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.8□□□□□ -2.28
USH1CQ9Y6N9 RPS29P1-201ENST00000465274 159 ntBASIC0.8□□□□□ -2.28
USH1CQ9Y6N9 AC079140.5-201ENST00000507882 310 ntBASIC0.8□□□□□ -2.28
USH1CQ9Y6N9 DEFB131C-201ENST00000528817 165 ntBASIC0.8□□□□□ -2.28
USH1CQ9Y6N9 MIR4661-201ENST00000582720 75 ntBASIC0.8□□□□□ -2.28
USH1CQ9Y6N9 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.8□□□□□ -2.28
USH1CQ9Y6N9 AL021879.1-201ENST00000611756 288 ntBASIC0.8□□□□□ -2.28
USH1CQ9Y6N9 AC004223.4-201ENST00000612426 332 ntBASIC0.8□□□□□ -2.28
USH1CQ9Y6N9 RMST_2.1-201ENST00000617263 136 ntBASIC0.8□□□□□ -2.28
USH1CQ9Y6N9 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC0.8□□□□□ -2.28
USH1CQ9Y6N9 snoU2-30.2-201ENST00000362805 70 ntBASIC0.79□□□□□ -2.28
USH1CQ9Y6N9 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.79□□□□□ -2.28
USH1CQ9Y6N9 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC0.79□□□□□ -2.28
USH1CQ9Y6N9 MTND3P17-201ENST00000416968 344 ntBASIC0.79□□□□□ -2.28
USH1CQ9Y6N9 AC010099.3-201ENST00000423896 409 ntBASIC0.79□□□□□ -2.28
USH1CQ9Y6N9 AC009961.2-201ENST00000435771 251 ntBASIC0.79□□□□□ -2.28
USH1CQ9Y6N9 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.79□□□□□ -2.28
USH1CQ9Y6N9 snoU13.6-201ENST00000458785 104 ntBASIC0.79□□□□□ -2.28
USH1CQ9Y6N9 RNU6-948P-201ENST00000516374 107 ntBASIC0.79□□□□□ -2.28
USH1CQ9Y6N9 SCARNA16.2-201ENST00000516520 172 ntBASIC0.79□□□□□ -2.28
USH1CQ9Y6N9 SNORA70.22-201ENST00000517160 124 ntBASIC0.79□□□□□ -2.28
USH1CQ9Y6N9 RNU6-165P-201ENST00000517170 99 ntBASIC0.79□□□□□ -2.28
USH1CQ9Y6N9 MTCO3P23-201ENST00000561363 289 ntBASIC0.79□□□□□ -2.28
USH1CQ9Y6N9 MIR4742-201ENST00000581069 85 ntBASIC0.79□□□□□ -2.28
USH1CQ9Y6N9 MIR151B-201ENST00000584249 96 ntBASIC0.79□□□□□ -2.28
USH1CQ9Y6N9 MIR98-201ENST00000606724 119 ntBASIC0.79□□□□□ -2.28
USH1CQ9Y6N9 MIR6788-201ENST00000618842 66 ntBASIC0.79□□□□□ -2.28
USH1CQ9Y6N9 AL603839.4-201ENST00000624658 1005 ntBASIC0.79□□□□□ -2.28
USH1CQ9Y6N9 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.79□□□□□ -2.28
USH1CQ9Y6N9 MIR6767-201ENST00000637302 66 ntBASIC0.79□□□□□ -2.28
USH1CQ9Y6N9 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC0.79□□□□□ -2.28
USH1CQ9Y6N9 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.79□□□□□ -2.28
USH1CQ9Y6N9 RNU6-1097P-201ENST00000363586 107 ntBASIC0.78□□□□□ -2.28
USH1CQ9Y6N9 RNU6-108P-201ENST00000365558 107 ntBASIC0.78□□□□□ -2.28
USH1CQ9Y6N9 RNU6-1127P-201ENST00000384580 107 ntBASIC0.78□□□□□ -2.28
USH1CQ9Y6N9 MIR489-201ENST00000384923 84 ntBASIC0.78□□□□□ -2.28
USH1CQ9Y6N9 RNA5SP109-201ENST00000391010 116 ntBASIC0.78□□□□□ -2.28
USH1CQ9Y6N9 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.78□□□□□ -2.28
USH1CQ9Y6N9 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.78□□□□□ -2.28
USH1CQ9Y6N9 POLR2J4-204ENST00000418424 324 ntBASIC0.78□□□□□ -2.28
USH1CQ9Y6N9 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC0.78□□□□□ -2.28
USH1CQ9Y6N9 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC0.78□□□□□ -2.28
USH1CQ9Y6N9 HMGN2P34-201ENST00000437647 269 ntBASIC0.78□□□□□ -2.28
USH1CQ9Y6N9 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC0.78□□□□□ -2.28
USH1CQ9Y6N9 SNRPFP3-201ENST00000457792 225 ntBASIC0.78□□□□□ -2.28
USH1CQ9Y6N9 SCARNA18-201ENST00000459004 134 ntBASIC0.78□□□□□ -2.28
USH1CQ9Y6N9 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC0.78□□□□□ -2.28
USH1CQ9Y6N9 AC005178.1-201ENST00000508392 440 ntBASIC0.78□□□□□ -2.28
USH1CQ9Y6N9 ACA64.5-201ENST00000516207 127 ntBASIC0.78□□□□□ -2.28
USH1CQ9Y6N9 RN7SKP265-201ENST00000516448 223 ntBASIC0.78□□□□□ -2.28
USH1CQ9Y6N9 RNU6-1223P-201ENST00000517124 104 ntBASIC0.78□□□□□ -2.28
USH1CQ9Y6N9 AC069113.1-201ENST00000517763 267 ntBASIC0.78□□□□□ -2.28
USH1CQ9Y6N9 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC0.78□□□□□ -2.28
USH1CQ9Y6N9 AL137100.2-201ENST00000555786 315 ntBASIC0.78□□□□□ -2.28
USH1CQ9Y6N9 AGGF1P4-201ENST00000568249 801 ntBASIC0.78□□□□□ -2.28
USH1CQ9Y6N9 MIR4703-201ENST00000577728 79 ntBASIC0.78□□□□□ -2.28
USH1CQ9Y6N9 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.78□□□□□ -2.28
USH1CQ9Y6N9 AC008088.1-201ENST00000580993 280 ntBASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 168.8 ms