Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 AC004854.1-201ENST00000440356 349 ntBASIC0.39□□□□□ -2.35
SCN10AQ9Y5Y9 RPL39P39-201ENST00000455840 151 ntBASIC0.39□□□□□ -2.35
SCN10AQ9Y5Y9 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC0.39□□□□□ -2.35
SCN10AQ9Y5Y9 RNU7-90P-201ENST00000459216 62 ntBASIC0.39□□□□□ -2.35
SCN10AQ9Y5Y9 RNU7-34P-201ENST00000459394 64 ntBASIC0.39□□□□□ -2.35
SCN10AQ9Y5Y9 AC116347.2-201ENST00000514912 523 ntBASIC0.39□□□□□ -2.35
SCN10AQ9Y5Y9 PCMTD1P2-201ENST00000565017 355 ntBASIC0.39□□□□□ -2.35
SCN10AQ9Y5Y9 MIR4636-201ENST00000582271 80 ntBASIC0.39□□□□□ -2.35
SCN10AQ9Y5Y9 AL627230.5-201ENST00000619807 58 ntBASIC0.39□□□□□ -2.35
SCN10AQ9Y5Y9 AL031667.3-201ENST00000620124 655 ntBASIC0.39□□□□□ -2.35
SCN10AQ9Y5Y9 MTND4P5-201ENST00000435821 1374 ntBASIC0.38□□□□□ -2.35
SCN10AQ9Y5Y9 RNU4-48P-201ENST00000365559 182 ntBASIC0.38□□□□□ -2.35
SCN10AQ9Y5Y9 RNU6-417P-201ENST00000384712 107 ntBASIC0.38□□□□□ -2.35
SCN10AQ9Y5Y9 AL022718.1-201ENST00000412004 84 ntBASIC0.38□□□□□ -2.35
SCN10AQ9Y5Y9 AL356583.2-201ENST00000426536 280 ntBASIC0.38□□□□□ -2.35
SCN10AQ9Y5Y9 AL157398.1-201ENST00000452981 186 ntBASIC0.38□□□□□ -2.35
SCN10AQ9Y5Y9 AL049829.1-201ENST00000465411 156 ntBASIC0.38□□□□□ -2.35
SCN10AQ9Y5Y9 RNU6-1041P-201ENST00000516254 102 ntBASIC0.38□□□□□ -2.35
SCN10AQ9Y5Y9 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC0.38□□□□□ -2.35
SCN10AQ9Y5Y9 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.38□□□□□ -2.35
SCN10AQ9Y5Y9 AC078795.3-201ENST00000602913 472 ntBASIC0.38□□□□□ -2.35
SCN10AQ9Y5Y9 AL158032.1-201ENST00000605401 106 ntBASIC0.38□□□□□ -2.35
SCN10AQ9Y5Y9 AL451064.1-201ENST00000607718 471 ntBASIC0.38□□□□□ -2.35
SCN10AQ9Y5Y9 AC104465.1-201ENST00000611365 139 ntBASIC0.38□□□□□ -2.35
SCN10AQ9Y5Y9 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC0.38□□□□□ -2.35
SCN10AQ9Y5Y9 BX322639.1-202ENST00000423987 2213 ntBASIC0.38□□□□□ -2.35
SCN10AQ9Y5Y9 RNA5SP361-201ENST00000362686 118 ntBASIC0.37□□□□□ -2.35
SCN10AQ9Y5Y9 SNORA50A-201ENST00000384225 134 ntBASIC0.37□□□□□ -2.35
SCN10AQ9Y5Y9 SNORD89-201ENST00000390981 114 ntBASIC0.37□□□□□ -2.35
SCN10AQ9Y5Y9 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.37□□□□□ -2.35
SCN10AQ9Y5Y9 RPS29P13-201ENST00000402041 169 ntBASIC0.37□□□□□ -2.35
SCN10AQ9Y5Y9 ELOCP4-201ENST00000420090 333 ntBASIC0.37□□□□□ -2.35
SCN10AQ9Y5Y9 AL354692.1-201ENST00000423044 315 ntBASIC0.37□□□□□ -2.35
SCN10AQ9Y5Y9 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC0.37□□□□□ -2.35
SCN10AQ9Y5Y9 MTCYBP1-201ENST00000454315 1119 ntBASIC0.37□□□□□ -2.35
SCN10AQ9Y5Y9 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC0.37□□□□□ -2.35
SCN10AQ9Y5Y9 RNU7-94P-201ENST00000459576 63 ntBASIC0.37□□□□□ -2.35
SCN10AQ9Y5Y9 AC016632.1-201ENST00000503994 196 ntBASIC0.37□□□□□ -2.35
SCN10AQ9Y5Y9 RNU6-947P-201ENST00000516264 106 ntBASIC0.37□□□□□ -2.35
SCN10AQ9Y5Y9 MIR4514-201ENST00000581410 57 ntBASIC0.37□□□□□ -2.35
SCN10AQ9Y5Y9 MIR4307-201ENST00000582802 84 ntBASIC0.37□□□□□ -2.35
SCN10AQ9Y5Y9 AC093913.1-201ENST00000614178 329 ntBASIC0.37□□□□□ -2.35
SCN10AQ9Y5Y9 AC131159.1-201ENST00000621854 213 ntBASIC0.37□□□□□ -2.35
SCN10AQ9Y5Y9 SNORD18A-201ENST00000363753 72 ntBASIC0.37□□□□□ -2.35
SCN10AQ9Y5Y9 U3.9-201ENST00000363823 204 ntBASIC0.37□□□□□ -2.35
SCN10AQ9Y5Y9 SNORA2A-201ENST00000383885 135 ntBASIC0.37□□□□□ -2.35
SCN10AQ9Y5Y9 RNU6-1026P-201ENST00000384465 108 ntBASIC0.37□□□□□ -2.35
SCN10AQ9Y5Y9 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC0.37□□□□□ -2.35
SCN10AQ9Y5Y9 RPL37P21-201ENST00000435890 276 ntBASIC0.37□□□□□ -2.35
SCN10AQ9Y5Y9 AC098869.1-201ENST00000481627 292 ntBASIC0.37□□□□□ -2.35
SCN10AQ9Y5Y9 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC0.37□□□□□ -2.35
SCN10AQ9Y5Y9 KRTAP13-6P-201ENST00000508999 371 ntBASIC0.37□□□□□ -2.35
SCN10AQ9Y5Y9 RNU4-57P-201ENST00000515980 135 ntBASIC0.37□□□□□ -2.35
SCN10AQ9Y5Y9 RNU6-276P-201ENST00000516114 96 ntBASIC0.37□□□□□ -2.35
SCN10AQ9Y5Y9 AC023050.3-201ENST00000541142 333 ntBASIC0.37□□□□□ -2.35
SCN10AQ9Y5Y9 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.37□□□□□ -2.35
SCN10AQ9Y5Y9 AL136221.1-201ENST00000621449 509 ntBASIC0.37□□□□□ -2.35
SCN10AQ9Y5Y9 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC0.37□□□□□ -2.35
SCN10AQ9Y5Y9 CASC19-280ENST00000642102 1351 ntBASIC0.37□□□□□ -2.35
SCN10AQ9Y5Y9 Y_RNA.303-201ENST00000364998 94 ntBASIC0.36□□□□□ -2.35
SCN10AQ9Y5Y9 RNU6-116P-201ENST00000384042 109 ntBASIC0.36□□□□□ -2.35
SCN10AQ9Y5Y9 RNU6-190P-201ENST00000384154 102 ntBASIC0.36□□□□□ -2.35
SCN10AQ9Y5Y9 SNORA80D-201ENST00000384488 135 ntBASIC0.36□□□□□ -2.35
SCN10AQ9Y5Y9 MIR300-201ENST00000401138 83 ntBASIC0.36□□□□□ -2.35
SCN10AQ9Y5Y9 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.36□□□□□ -2.35
SCN10AQ9Y5Y9 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.36□□□□□ -2.35
SCN10AQ9Y5Y9 MTCO2P21-201ENST00000419780 677 ntBASIC0.36□□□□□ -2.35
SCN10AQ9Y5Y9 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
SCN10AQ9Y5Y9 AL606517.2-201ENST00000442855 241 ntBASIC0.36□□□□□ -2.35
SCN10AQ9Y5Y9 MTCO2P7-201ENST00000446518 666 ntBASIC0.36□□□□□ -2.35
SCN10AQ9Y5Y9 AL031313.1-201ENST00000448435 256 ntBASIC0.36□□□□□ -2.35
SCN10AQ9Y5Y9 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC0.36□□□□□ -2.35
SCN10AQ9Y5Y9 MTCO2P29-201ENST00000465212 189 ntBASIC0.36□□□□□ -2.35
SCN10AQ9Y5Y9 AC010486.2-201ENST00000505572 483 ntBASIC0.36□□□□□ -2.35
SCN10AQ9Y5Y9 AC104136.1-201ENST00000512969 394 ntBASIC0.36□□□□□ -2.35
SCN10AQ9Y5Y9 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC0.36□□□□□ -2.35
SCN10AQ9Y5Y9 RNU4-54P-201ENST00000516428 129 ntBASIC0.36□□□□□ -2.35
SCN10AQ9Y5Y9 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.36□□□□□ -2.35
SCN10AQ9Y5Y9 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC0.36□□□□□ -2.35
SCN10AQ9Y5Y9 MIR4742-201ENST00000581069 85 ntBASIC0.36□□□□□ -2.35
SCN10AQ9Y5Y9 MIR5006-201ENST00000583027 110 ntBASIC0.36□□□□□ -2.35
SCN10AQ9Y5Y9 AC008521.1-201ENST00000587471 187 ntBASIC0.36□□□□□ -2.35
SCN10AQ9Y5Y9 AL929325.1-201ENST00000603096 117 ntBASIC0.36□□□□□ -2.35
SCN10AQ9Y5Y9 AC064807.4-201ENST00000607201 407 ntBASIC0.36□□□□□ -2.35
SCN10AQ9Y5Y9 MIR6718-201ENST00000616153 80 ntBASIC0.36□□□□□ -2.35
SCN10AQ9Y5Y9 MESTIT1_1.1-201ENST00000618871 140 ntBASIC0.36□□□□□ -2.35
SCN10AQ9Y5Y9 MIR8054-201ENST00000620877 86 ntBASIC0.36□□□□□ -2.35
SCN10AQ9Y5Y9 RNU6-428P-201ENST00000362942 107 ntBASIC0.36□□□□□ -2.35
SCN10AQ9Y5Y9 Y_RNA.97-201ENST00000363094 102 ntBASIC0.36□□□□□ -2.35
SCN10AQ9Y5Y9 U3.8-201ENST00000363675 217 ntBASIC0.36□□□□□ -2.35
SCN10AQ9Y5Y9 RNU4-12P-201ENST00000365233 139 ntBASIC0.36□□□□□ -2.35
SCN10AQ9Y5Y9 RNU6-641P-201ENST00000384006 107 ntBASIC0.36□□□□□ -2.35
SCN10AQ9Y5Y9 AC010154.1-201ENST00000425857 269 ntBASIC0.36□□□□□ -2.35
SCN10AQ9Y5Y9 AC092423.1-201ENST00000430165 186 ntBASIC0.36□□□□□ -2.35
SCN10AQ9Y5Y9 RNA5SP285-201ENST00000516619 119 ntBASIC0.36□□□□□ -2.35
SCN10AQ9Y5Y9 AC109479.2-201ENST00000517842 174 ntBASIC0.36□□□□□ -2.35
SCN10AQ9Y5Y9 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.36□□□□□ -2.35
SCN10AQ9Y5Y9 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC0.36□□□□□ -2.35
SCN10AQ9Y5Y9 AC005771.1-201ENST00000585581 349 ntBASIC0.36□□□□□ -2.35
SCN10AQ9Y5Y9 AC006386.1-201ENST00000619436 415 ntBASIC0.36□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 236.6 ms