Protein–RNA interactions for Protein: Q9Y5H5

PCDHA9, Protocadherin alpha-9, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9Q9Y5H5 SNORA67.7-201ENST00000516664 135 ntBASIC3.17□□□□□ -1.9
PCDHA9Q9Y5H5 AC245166.1-201ENST00000521012 253 ntBASIC3.17□□□□□ -1.9
PCDHA9Q9Y5H5 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.17□□□□□ -1.9
PCDHA9Q9Y5H5 AC018630.3-201ENST00000542637 96 ntBASIC3.17□□□□□ -1.9
PCDHA9Q9Y5H5 AC105245.1-201ENST00000581934 244 ntBASIC3.17□□□□□ -1.9
PCDHA9Q9Y5H5 MIR3199-1-201ENST00000582434 88 ntBASIC3.17□□□□□ -1.9
PCDHA9Q9Y5H5 AL133393.1-201ENST00000603277 287 ntBASIC3.17□□□□□ -1.9
PCDHA9Q9Y5H5 AC091932.3-201ENST00000624223 323 ntBASIC3.17□□□□□ -1.9
PCDHA9Q9Y5H5 AC008873.1-201ENST00000625051 138 ntBASIC3.17□□□□□ -1.9
PCDHA9Q9Y5H5 IGHVIII-44-202ENST00000636235 289 ntBASIC3.17□□□□□ -1.9
PCDHA9Q9Y5H5 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC3.17□□□□□ -1.9
PCDHA9Q9Y5H5 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.17□□□□□ -1.9
PCDHA9Q9Y5H5 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.16□□□□□ -1.9
PCDHA9Q9Y5H5 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PCDHA9Q9Y5H5 Z82209.1-201ENST00000422141 2135 ntBASIC3.16□□□□□ -1.9
PCDHA9Q9Y5H5 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.16□□□□□ -1.9
PCDHA9Q9Y5H5 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PCDHA9Q9Y5H5 RNA5SP119-201ENST00000362715 117 ntBASIC3.16□□□□□ -1.9
PCDHA9Q9Y5H5 Y_RNA.54-201ENST00000362766 105 ntBASIC3.16□□□□□ -1.9
PCDHA9Q9Y5H5 U3.8-201ENST00000363675 217 ntBASIC3.16□□□□□ -1.9
PCDHA9Q9Y5H5 RNY1-201ENST00000364228 113 ntBASIC3.16□□□□□ -1.9
PCDHA9Q9Y5H5 Y_RNA.383-201ENST00000383855 97 ntBASIC3.16□□□□□ -1.9
PCDHA9Q9Y5H5 RNU6-338P-201ENST00000383888 105 ntBASIC3.16□□□□□ -1.9
PCDHA9Q9Y5H5 Y_RNA.446-201ENST00000384178 104 ntBASIC3.16□□□□□ -1.9
PCDHA9Q9Y5H5 MIR218-1-201ENST00000384999 110 ntBASIC3.16□□□□□ -1.9
PCDHA9Q9Y5H5 RNU2-54P-201ENST00000410299 190 ntBASIC3.16□□□□□ -1.9
PCDHA9Q9Y5H5 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PCDHA9Q9Y5H5 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC3.16□□□□□ -1.9
PCDHA9Q9Y5H5 Z98949.2-201ENST00000440996 144 ntBASIC3.16□□□□□ -1.9
PCDHA9Q9Y5H5 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC3.16□□□□□ -1.9
PCDHA9Q9Y5H5 RNA5SP217-201ENST00000515959 91 ntBASIC3.16□□□□□ -1.9
PCDHA9Q9Y5H5 RNU4-71P-201ENST00000516258 113 ntBASIC3.16□□□□□ -1.9
PCDHA9Q9Y5H5 RNU5F-4P-201ENST00000516581 114 ntBASIC3.16□□□□□ -1.9
PCDHA9Q9Y5H5 RNU6-107P-201ENST00000516643 102 ntBASIC3.16□□□□□ -1.9
PCDHA9Q9Y5H5 RNU6-1098P-201ENST00000516772 96 ntBASIC3.16□□□□□ -1.9
PCDHA9Q9Y5H5 AP002001.1-203ENST00000534002 267 ntBASIC3.16□□□□□ -1.9
PCDHA9Q9Y5H5 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.16□□□□□ -1.9
PCDHA9Q9Y5H5 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.16□□□□□ -1.9
PCDHA9Q9Y5H5 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.16□□□□□ -1.9
PCDHA9Q9Y5H5 MIR5739-201ENST00000619803 80 ntBASIC3.16□□□□□ -1.9
PCDHA9Q9Y5H5 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PCDHA9Q9Y5H5 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PCDHA9Q9Y5H5 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PCDHA9Q9Y5H5 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
PCDHA9Q9Y5H5 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC3.16□□□□□ -1.9
PCDHA9Q9Y5H5 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
PCDHA9Q9Y5H5 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.15□□□□□ -1.9
PCDHA9Q9Y5H5 AC080128.1-201ENST00000474389 1917 ntBASIC3.15□□□□□ -1.9
PCDHA9Q9Y5H5 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
PCDHA9Q9Y5H5 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
PCDHA9Q9Y5H5 AC092593.1-201ENST00000515413 1815 ntBASIC3.15□□□□□ -1.91
PCDHA9Q9Y5H5 AC092435.3-201ENST00000565538 3654 ntBASIC3.15□□□□□ -1.91
PCDHA9Q9Y5H5 Y_RNA.44-201ENST00000362676 108 ntBASIC3.15□□□□□ -1.91
PCDHA9Q9Y5H5 RNA5SP50-201ENST00000363731 107 ntBASIC3.15□□□□□ -1.91
PCDHA9Q9Y5H5 Y_RNA.277-201ENST00000364754 102 ntBASIC3.15□□□□□ -1.91
PCDHA9Q9Y5H5 SNORD87-201ENST00000364849 89 ntBASIC3.15□□□□□ -1.91
PCDHA9Q9Y5H5 SNORD21-201ENST00000383953 95 ntBASIC3.15□□□□□ -1.91
PCDHA9Q9Y5H5 MIR586-201ENST00000385035 97 ntBASIC3.15□□□□□ -1.91
PCDHA9Q9Y5H5 RPL21P3-201ENST00000395517 478 ntBASIC3.15□□□□□ -1.91
PCDHA9Q9Y5H5 RNU6-1199P-201ENST00000411249 104 ntBASIC3.15□□□□□ -1.91
PCDHA9Q9Y5H5 RPL19P1-201ENST00000411635 428 ntBASIC3.15□□□□□ -1.91
PCDHA9Q9Y5H5 AC009963.1-201ENST00000417265 157 ntBASIC3.15□□□□□ -1.91
PCDHA9Q9Y5H5 TOMM22P2-201ENST00000430735 237 ntBASIC3.15□□□□□ -1.91
PCDHA9Q9Y5H5 CST9LP2-201ENST00000437612 320 ntBASIC3.15□□□□□ -1.91
PCDHA9Q9Y5H5 AC115115.1-201ENST00000449927 248 ntBASIC3.15□□□□□ -1.91
PCDHA9Q9Y5H5 RNU1-117P-201ENST00000517041 158 ntBASIC3.15□□□□□ -1.91
PCDHA9Q9Y5H5 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC3.15□□□□□ -1.91
PCDHA9Q9Y5H5 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.15□□□□□ -1.91
PCDHA9Q9Y5H5 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.15□□□□□ -1.91
PCDHA9Q9Y5H5 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.15□□□□□ -1.91
PCDHA9Q9Y5H5 AL442067.1-201ENST00000613261 223 ntBASIC3.15□□□□□ -1.91
PCDHA9Q9Y5H5 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC3.15□□□□□ -1.91
PCDHA9Q9Y5H5 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.15□□□□□ -1.91
PCDHA9Q9Y5H5 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PCDHA9Q9Y5H5 SNORA25.1-201ENST00000362326 128 ntBASIC3.14□□□□□ -1.91
PCDHA9Q9Y5H5 RNU1-70P-201ENST00000362618 164 ntBASIC3.14□□□□□ -1.91
PCDHA9Q9Y5H5 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.14□□□□□ -1.91
PCDHA9Q9Y5H5 RN7SKP58-201ENST00000411010 305 ntBASIC3.14□□□□□ -1.91
PCDHA9Q9Y5H5 Z75741.1-201ENST00000446793 314 ntBASIC3.14□□□□□ -1.91
PCDHA9Q9Y5H5 RNU2-12P-201ENST00000517216 168 ntBASIC3.14□□□□□ -1.91
PCDHA9Q9Y5H5 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC3.14□□□□□ -1.91
PCDHA9Q9Y5H5 AL109918.3-201ENST00000603072 338 ntBASIC3.14□□□□□ -1.91
PCDHA9Q9Y5H5 AC006380.1-201ENST00000603598 186 ntBASIC3.14□□□□□ -1.91
PCDHA9Q9Y5H5 AC009779.6-201ENST00000603972 165 ntBASIC3.14□□□□□ -1.91
PCDHA9Q9Y5H5 uc_338.1-201ENST00000612113 180 ntBASIC3.14□□□□□ -1.91
PCDHA9Q9Y5H5 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.14□□□□□ -1.91
PCDHA9Q9Y5H5 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC3.14□□□□□ -1.91
PCDHA9Q9Y5H5 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
PCDHA9Q9Y5H5 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.14□□□□□ -1.91
PCDHA9Q9Y5H5 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.14□□□□□ -1.91
PCDHA9Q9Y5H5 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.14□□□□□ -1.91
PCDHA9Q9Y5H5 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
PCDHA9Q9Y5H5 AL355596.1-201ENST00000565399 3996 ntBASIC3.13□□□□□ -1.91
PCDHA9Q9Y5H5 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
PCDHA9Q9Y5H5 UBE2WP1-201ENST00000362030 340 ntBASIC3.13□□□□□ -1.91
PCDHA9Q9Y5H5 RNU6-944P-201ENST00000364023 107 ntBASIC3.13□□□□□ -1.91
PCDHA9Q9Y5H5 Y_RNA.418-201ENST00000384029 102 ntBASIC3.13□□□□□ -1.91
PCDHA9Q9Y5H5 RNU6-514P-201ENST00000384208 107 ntBASIC3.13□□□□□ -1.91
PCDHA9Q9Y5H5 MIR490-201ENST00000384865 128 ntBASIC3.13□□□□□ -1.91
PCDHA9Q9Y5H5 MIR95-201ENST00000385072 81 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 235.2 ms