Protein–RNA interactions for Protein: Q9Y3E7

CHMP3, Charged multivesicular body protein 3, humanhuman

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3Q9Y3E7 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CHMP3Q9Y3E7 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CHMP3Q9Y3E7 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CHMP3Q9Y3E7 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
CHMP3Q9Y3E7 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CHMP3Q9Y3E7 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CHMP3Q9Y3E7 Y_RNA.357-201ENST00000365487 109 ntBASIC4.29□□□□□ -1.72
CHMP3Q9Y3E7 MIR491-201ENST00000384877 84 ntBASIC4.29□□□□□ -1.72
CHMP3Q9Y3E7 SNORA26.5-201ENST00000391215 123 ntBASIC4.29□□□□□ -1.72
CHMP3Q9Y3E7 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC4.29□□□□□ -1.72
CHMP3Q9Y3E7 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC4.29□□□□□ -1.72
CHMP3Q9Y3E7 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.29□□□□□ -1.72
CHMP3Q9Y3E7 AC146507.2-201ENST00000460608 476 ntBASIC4.29□□□□□ -1.72
CHMP3Q9Y3E7 RPL31P41-201ENST00000477967 372 ntBASIC4.29□□□□□ -1.72
CHMP3Q9Y3E7 RPL32P34-201ENST00000486380 400 ntBASIC4.29□□□□□ -1.72
CHMP3Q9Y3E7 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC4.29□□□□□ -1.72
CHMP3Q9Y3E7 DEFB131C-201ENST00000528817 165 ntBASIC4.29□□□□□ -1.72
CHMP3Q9Y3E7 AC090616.3-201ENST00000582184 217 ntBASIC4.29□□□□□ -1.72
CHMP3Q9Y3E7 MIR3136-201ENST00000583498 78 ntBASIC4.29□□□□□ -1.72
CHMP3Q9Y3E7 AC006380.1-201ENST00000603598 186 ntBASIC4.29□□□□□ -1.72
CHMP3Q9Y3E7 SNRPGP20-201ENST00000604477 205 ntBASIC4.29□□□□□ -1.72
CHMP3Q9Y3E7 Y_RNA.778-201ENST00000620203 90 ntBASIC4.29□□□□□ -1.72
CHMP3Q9Y3E7 AC018692.3-201ENST00000623929 123 ntBASIC4.29□□□□□ -1.72
CHMP3Q9Y3E7 AC073346.2-201ENST00000624724 2058 ntBASIC4.29□□□□□ -1.72
CHMP3Q9Y3E7 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CHMP3Q9Y3E7 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
CHMP3Q9Y3E7 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
CHMP3Q9Y3E7 AC004944.1-201ENST00000517807 3059 ntBASIC4.28□□□□□ -1.72
CHMP3Q9Y3E7 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CHMP3Q9Y3E7 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
CHMP3Q9Y3E7 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CHMP3Q9Y3E7 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC4.28□□□□□ -1.72
CHMP3Q9Y3E7 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC4.28□□□□□ -1.72
CHMP3Q9Y3E7 RNU6-283P-201ENST00000364788 107 ntBASIC4.28□□□□□ -1.72
CHMP3Q9Y3E7 MIR569-201ENST00000385228 96 ntBASIC4.28□□□□□ -1.72
CHMP3Q9Y3E7 SNORA40.19-201ENST00000390846 128 ntBASIC4.28□□□□□ -1.72
CHMP3Q9Y3E7 RNU6-1248P-201ENST00000391096 64 ntBASIC4.28□□□□□ -1.72
CHMP3Q9Y3E7 RNU6-381P-201ENST00000391259 108 ntBASIC4.28□□□□□ -1.72
CHMP3Q9Y3E7 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC4.28□□□□□ -1.72
CHMP3Q9Y3E7 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
CHMP3Q9Y3E7 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.28□□□□□ -1.72
CHMP3Q9Y3E7 AC093663.1-201ENST00000497190 394 ntBASIC4.28□□□□□ -1.72
CHMP3Q9Y3E7 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.28□□□□□ -1.72
CHMP3Q9Y3E7 MIR3923-201ENST00000579521 83 ntBASIC4.28□□□□□ -1.72
CHMP3Q9Y3E7 AC091152.3-201ENST00000604227 325 ntBASIC4.28□□□□□ -1.72
CHMP3Q9Y3E7 XIST_intron.1-201ENST00000619444 68 ntBASIC4.28□□□□□ -1.72
CHMP3Q9Y3E7 AC244205.2-202ENST00000635781 342 ntBASIC4.28□□□□□ -1.72
CHMP3Q9Y3E7 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CHMP3Q9Y3E7 AC134026.1-201ENST00000623249 2239 ntBASIC4.27□□□□□ -1.73
CHMP3Q9Y3E7 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CHMP3Q9Y3E7 MIR423-201ENST00000362201 94 ntBASIC4.27□□□□□ -1.73
CHMP3Q9Y3E7 Y_RNA.121-201ENST00000363309 113 ntBASIC4.27□□□□□ -1.73
CHMP3Q9Y3E7 RNU6-1048P-201ENST00000364054 107 ntBASIC4.27□□□□□ -1.73
CHMP3Q9Y3E7 snoU2_19.4-201ENST00000364329 80 ntBASIC4.27□□□□□ -1.73
CHMP3Q9Y3E7 RNU6-1264P-201ENST00000383891 107 ntBASIC4.27□□□□□ -1.73
CHMP3Q9Y3E7 Y_RNA.572-201ENST00000384757 98 ntBASIC4.27□□□□□ -1.73
CHMP3Q9Y3E7 RNU6-1168P-201ENST00000390831 104 ntBASIC4.27□□□□□ -1.73
CHMP3Q9Y3E7 RNA5SP201-201ENST00000410316 124 ntBASIC4.27□□□□□ -1.73
CHMP3Q9Y3E7 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.27□□□□□ -1.73
CHMP3Q9Y3E7 CYCSP48-201ENST00000417124 323 ntBASIC4.27□□□□□ -1.73
CHMP3Q9Y3E7 AL159169.1-201ENST00000421119 127 ntBASIC4.27□□□□□ -1.73
CHMP3Q9Y3E7 HMGN2P20-201ENST00000437531 273 ntBASIC4.27□□□□□ -1.73
CHMP3Q9Y3E7 RPS20P10-201ENST00000451209 253 ntBASIC4.27□□□□□ -1.73
CHMP3Q9Y3E7 SRI-210ENST00000490437 570 ntTSL 2 BASIC4.27□□□□□ -1.73
CHMP3Q9Y3E7 FCF1P8-201ENST00000510322 597 ntBASIC4.27□□□□□ -1.73
CHMP3Q9Y3E7 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC4.27□□□□□ -1.73
CHMP3Q9Y3E7 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4.27□□□□□ -1.73
CHMP3Q9Y3E7 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC4.27□□□□□ -1.73
CHMP3Q9Y3E7 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CHMP3Q9Y3E7 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CHMP3Q9Y3E7 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CHMP3Q9Y3E7 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CHMP3Q9Y3E7 AL049781.1-201ENST00000623195 3585 ntBASIC4.26□□□□□ -1.73
CHMP3Q9Y3E7 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CHMP3Q9Y3E7 RNU6-275P-201ENST00000364910 107 ntBASIC4.26□□□□□ -1.73
CHMP3Q9Y3E7 MIR320B2-201ENST00000408479 138 ntBASIC4.26□□□□□ -1.73
CHMP3Q9Y3E7 RNU2-49P-201ENST00000410666 184 ntBASIC4.26□□□□□ -1.73
CHMP3Q9Y3E7 RNA5SP504-201ENST00000410676 117 ntBASIC4.26□□□□□ -1.73
CHMP3Q9Y3E7 RNA5SP120-201ENST00000410900 112 ntBASIC4.26□□□□□ -1.73
CHMP3Q9Y3E7 PTGES3P4-201ENST00000426243 356 ntBASIC4.26□□□□□ -1.73
CHMP3Q9Y3E7 AC027124.2-201ENST00000428249 105 ntBASIC4.26□□□□□ -1.73
CHMP3Q9Y3E7 AC005326.1-201ENST00000429197 123 ntBASIC4.26□□□□□ -1.73
CHMP3Q9Y3E7 AC107626.1-201ENST00000471084 183 ntBASIC4.26□□□□□ -1.73
CHMP3Q9Y3E7 AC005840.1-201ENST00000498412 377 ntBASIC4.26□□□□□ -1.73
CHMP3Q9Y3E7 Y_RNA.797-201ENST00000515977 94 ntBASIC4.26□□□□□ -1.73
CHMP3Q9Y3E7 RNU1-117P-201ENST00000517041 158 ntBASIC4.26□□□□□ -1.73
CHMP3Q9Y3E7 AC026333.2-201ENST00000542164 106 ntBASIC4.26□□□□□ -1.73
CHMP3Q9Y3E7 AC105137.2-201ENST00000569073 466 ntBASIC4.26□□□□□ -1.73
CHMP3Q9Y3E7 MIR3609-201ENST00000582661 80 ntBASIC4.26□□□□□ -1.73
CHMP3Q9Y3E7 MIR5195-201ENST00000583555 115 ntBASIC4.26□□□□□ -1.73
CHMP3Q9Y3E7 MIR4276-201ENST00000584832 70 ntBASIC4.26□□□□□ -1.73
CHMP3Q9Y3E7 PCGEM1.1-201ENST00000613431 131 ntBASIC4.26□□□□□ -1.73
CHMP3Q9Y3E7 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4.26□□□□□ -1.73
CHMP3Q9Y3E7 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CHMP3Q9Y3E7 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CHMP3Q9Y3E7 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CHMP3Q9Y3E7 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CHMP3Q9Y3E7 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC4.25□□□□□ -1.73
CHMP3Q9Y3E7 AC068647.1-201ENST00000489539 2265 ntBASIC4.25□□□□□ -1.73
CHMP3Q9Y3E7 SNORD115-30-201ENST00000364117 82 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms