Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 AC006026.1-201ENST00000444025 1803 ntBASIC1.29□□□□□ -2.2
KCNIP3Q9Y2W7 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
KCNIP3Q9Y2W7 RNU1-62P-201ENST00000362599 164 ntBASIC1.28□□□□□ -2.2
KCNIP3Q9Y2W7 Y_RNA.67-201ENST00000362870 100 ntBASIC1.28□□□□□ -2.2
KCNIP3Q9Y2W7 MIR548B-201ENST00000385247 97 ntBASIC1.28□□□□□ -2.2
KCNIP3Q9Y2W7 MIR320A-201ENST00000385302 82 ntBASIC1.28□□□□□ -2.2
KCNIP3Q9Y2W7 RN7SKP192-201ENST00000411291 327 ntBASIC1.28□□□□□ -2.2
KCNIP3Q9Y2W7 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC1.28□□□□□ -2.2
KCNIP3Q9Y2W7 MTCO3P29-201ENST00000432119 779 ntBASIC1.28□□□□□ -2.2
KCNIP3Q9Y2W7 ERLEC1P1-201ENST00000433806 578 ntBASIC1.28□□□□□ -2.2
KCNIP3Q9Y2W7 AC069257.2-201ENST00000441819 155 ntBASIC1.28□□□□□ -2.2
KCNIP3Q9Y2W7 MTND1P29-201ENST00000448112 647 ntBASIC1.28□□□□□ -2.2
KCNIP3Q9Y2W7 AC245517.4-201ENST00000448601 281 ntBASIC1.28□□□□□ -2.2
KCNIP3Q9Y2W7 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC1.28□□□□□ -2.2
KCNIP3Q9Y2W7 RNA5SP384-201ENST00000516615 116 ntBASIC1.28□□□□□ -2.2
KCNIP3Q9Y2W7 RNU6-1332P-201ENST00000516666 104 ntBASIC1.28□□□□□ -2.2
KCNIP3Q9Y2W7 RNA5SP481-201ENST00000516814 122 ntBASIC1.28□□□□□ -2.2
KCNIP3Q9Y2W7 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.28□□□□□ -2.2
KCNIP3Q9Y2W7 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.28□□□□□ -2.2
KCNIP3Q9Y2W7 AL133215.3-201ENST00000609801 448 ntBASIC1.28□□□□□ -2.2
KCNIP3Q9Y2W7 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.28□□□□□ -2.2
KCNIP3Q9Y2W7 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
KCNIP3Q9Y2W7 OR4G1P-203ENST00000641984 1631 ntBASIC1.28□□□□□ -2.2
KCNIP3Q9Y2W7 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
KCNIP3Q9Y2W7 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
KCNIP3Q9Y2W7 MTND4P5-201ENST00000435821 1374 ntBASIC1.27□□□□□ -2.21
KCNIP3Q9Y2W7 RNU4-82P-201ENST00000362443 140 ntBASIC1.27□□□□□ -2.21
KCNIP3Q9Y2W7 RNU6-271P-201ENST00000363858 105 ntBASIC1.27□□□□□ -2.21
KCNIP3Q9Y2W7 RNU6-128P-201ENST00000383976 107 ntBASIC1.27□□□□□ -2.21
KCNIP3Q9Y2W7 RNU6-975P-201ENST00000384296 105 ntBASIC1.27□□□□□ -2.21
KCNIP3Q9Y2W7 RNU6-933P-201ENST00000384424 107 ntBASIC1.27□□□□□ -2.21
KCNIP3Q9Y2W7 MIR521-1-201ENST00000384902 87 ntBASIC1.27□□□□□ -2.21
KCNIP3Q9Y2W7 RNU2-16P-201ENST00000410712 136 ntBASIC1.27□□□□□ -2.21
KCNIP3Q9Y2W7 RNU2-7P-201ENST00000410794 178 ntBASIC1.27□□□□□ -2.21
KCNIP3Q9Y2W7 RNU6-1068P-201ENST00000410958 103 ntBASIC1.27□□□□□ -2.21
KCNIP3Q9Y2W7 RNA5SP508-201ENST00000411327 119 ntBASIC1.27□□□□□ -2.21
KCNIP3Q9Y2W7 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.27□□□□□ -2.21
KCNIP3Q9Y2W7 SEPT14P3-201ENST00000439401 183 ntBASIC1.27□□□□□ -2.21
KCNIP3Q9Y2W7 AL732372.2-207ENST00000445840 183 ntBASIC1.27□□□□□ -2.21
KCNIP3Q9Y2W7 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.27□□□□□ -2.21
KCNIP3Q9Y2W7 NFU1P2-201ENST00000448700 469 ntBASIC1.27□□□□□ -2.21
KCNIP3Q9Y2W7 AL513124.1-201ENST00000450410 614 ntBASIC1.27□□□□□ -2.21
KCNIP3Q9Y2W7 SEPT14P2-201ENST00000453405 183 ntBASIC1.27□□□□□ -2.21
KCNIP3Q9Y2W7 MTCO3P8-201ENST00000453691 755 ntBASIC1.27□□□□□ -2.21
KCNIP3Q9Y2W7 AC114982.1-201ENST00000469402 321 ntBASIC1.27□□□□□ -2.21
KCNIP3Q9Y2W7 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.27□□□□□ -2.21
KCNIP3Q9Y2W7 AC107401.1-201ENST00000503426 685 ntBASIC1.27□□□□□ -2.21
KCNIP3Q9Y2W7 AC019235.1-201ENST00000503847 207 ntBASIC1.27□□□□□ -2.21
KCNIP3Q9Y2W7 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.27□□□□□ -2.21
KCNIP3Q9Y2W7 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.27□□□□□ -2.21
KCNIP3Q9Y2W7 SEPT14P4-201ENST00000513445 186 ntBASIC1.27□□□□□ -2.21
KCNIP3Q9Y2W7 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.27□□□□□ -2.21
KCNIP3Q9Y2W7 RNA5SP445-201ENST00000515889 115 ntBASIC1.27□□□□□ -2.21
KCNIP3Q9Y2W7 FO082796.1-201ENST00000523795 183 ntBASIC1.27□□□□□ -2.21
KCNIP3Q9Y2W7 RRN3P3-201ENST00000549207 578 ntBASIC1.27□□□□□ -2.21
KCNIP3Q9Y2W7 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.27□□□□□ -2.21
KCNIP3Q9Y2W7 AL512360.1-201ENST00000555346 234 ntBASIC1.27□□□□□ -2.21
KCNIP3Q9Y2W7 PIGPP4-201ENST00000584447 307 ntBASIC1.27□□□□□ -2.21
KCNIP3Q9Y2W7 NBR2-204ENST00000587322 63 ntBASIC1.27□□□□□ -2.21
KCNIP3Q9Y2W7 AP000907.4-201ENST00000604143 237 ntBASIC1.27□□□□□ -2.21
KCNIP3Q9Y2W7 AC126177.8-201ENST00000618339 1015 ntBASIC1.27□□□□□ -2.21
KCNIP3Q9Y2W7 MIR338-201ENST00000636369 67 ntBASIC1.27□□□□□ -2.21
KCNIP3Q9Y2W7 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
KCNIP3Q9Y2W7 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
KCNIP3Q9Y2W7 SNORD113-7-201ENST00000363762 77 ntBASIC1.26□□□□□ -2.21
KCNIP3Q9Y2W7 MIR586-201ENST00000385035 97 ntBASIC1.26□□□□□ -2.21
KCNIP3Q9Y2W7 MIR150-201ENST00000385048 84 ntBASIC1.26□□□□□ -2.21
KCNIP3Q9Y2W7 MIR450B-201ENST00000401182 78 ntBASIC1.26□□□□□ -2.21
KCNIP3Q9Y2W7 SNORA3.2-201ENST00000408221 125 ntBASIC1.26□□□□□ -2.21
KCNIP3Q9Y2W7 AL161935.2-201ENST00000414627 60 ntBASIC1.26□□□□□ -2.21
KCNIP3Q9Y2W7 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC1.26□□□□□ -2.21
KCNIP3Q9Y2W7 RPS29P23-201ENST00000458635 123 ntBASIC1.26□□□□□ -2.21
KCNIP3Q9Y2W7 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.26□□□□□ -2.21
KCNIP3Q9Y2W7 RPS26P55-201ENST00000471178 356 ntBASIC1.26□□□□□ -2.21
KCNIP3Q9Y2W7 AC083904.1-201ENST00000487828 231 ntBASIC1.26□□□□□ -2.21
KCNIP3Q9Y2W7 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.26□□□□□ -2.21
KCNIP3Q9Y2W7 RNU6-948P-201ENST00000516374 107 ntBASIC1.26□□□□□ -2.21
KCNIP3Q9Y2W7 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.26□□□□□ -2.21
KCNIP3Q9Y2W7 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
KCNIP3Q9Y2W7 AC026371.1-201ENST00000551867 419 ntBASIC1.26□□□□□ -2.21
KCNIP3Q9Y2W7 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.26□□□□□ -2.21
KCNIP3Q9Y2W7 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.26□□□□□ -2.21
KCNIP3Q9Y2W7 AC146944.4-201ENST00000602697 718 ntBASIC1.26□□□□□ -2.21
KCNIP3Q9Y2W7 SNRPGP20-201ENST00000604477 205 ntBASIC1.26□□□□□ -2.21
KCNIP3Q9Y2W7 PRR13P7-201ENST00000605538 430 ntBASIC1.26□□□□□ -2.21
KCNIP3Q9Y2W7 BX248123.2-201ENST00000606318 124 ntBASIC1.26□□□□□ -2.21
KCNIP3Q9Y2W7 AC137590.2-201ENST00000619709 240 ntBASIC1.26□□□□□ -2.21
KCNIP3Q9Y2W7 SCARNA4-201ENST00000629045 128 ntBASIC1.26□□□□□ -2.21
KCNIP3Q9Y2W7 MTND5P10-201ENST00000603719 1809 ntBASIC1.26□□□□□ -2.21
KCNIP3Q9Y2W7 RNU6-254P-201ENST00000363377 107 ntBASIC1.25□□□□□ -2.21
KCNIP3Q9Y2W7 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
KCNIP3Q9Y2W7 MIR517C-201ENST00000385103 95 ntBASIC1.25□□□□□ -2.21
KCNIP3Q9Y2W7 MIR549A-201ENST00000385268 96 ntBASIC1.25□□□□□ -2.21
KCNIP3Q9Y2W7 SNORA11.1-201ENST00000408133 129 ntBASIC1.25□□□□□ -2.21
KCNIP3Q9Y2W7 AC016717.1-201ENST00000448918 286 ntBASIC1.25□□□□□ -2.21
KCNIP3Q9Y2W7 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC1.25□□□□□ -2.21
KCNIP3Q9Y2W7 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
KCNIP3Q9Y2W7 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.25□□□□□ -2.21
KCNIP3Q9Y2W7 Y_RNA.665-201ENST00000516177 98 ntBASIC1.25□□□□□ -2.21
KCNIP3Q9Y2W7 RNU6-250P-201ENST00000516958 103 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms