Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 AP003122.5-201ENST00000527668 3766 ntBASIC2.14□□□□□ -2.07
NOTCH3Q9UM47 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.14□□□□□ -2.07
NOTCH3Q9UM47 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
NOTCH3Q9UM47 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.14□□□□□ -2.07
NOTCH3Q9UM47 RNU6-1056P-201ENST00000383996 107 ntBASIC2.14□□□□□ -2.07
NOTCH3Q9UM47 MIR196B-201ENST00000384852 84 ntBASIC2.14□□□□□ -2.07
NOTCH3Q9UM47 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
NOTCH3Q9UM47 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC2.14□□□□□ -2.07
NOTCH3Q9UM47 SSXP9-201ENST00000417503 292 ntBASIC2.14□□□□□ -2.07
NOTCH3Q9UM47 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.14□□□□□ -2.07
NOTCH3Q9UM47 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.14□□□□□ -2.07
NOTCH3Q9UM47 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC2.14□□□□□ -2.07
NOTCH3Q9UM47 HIGD1AP2-201ENST00000446367 280 ntBASIC2.14□□□□□ -2.07
NOTCH3Q9UM47 AL354710.1-201ENST00000453641 246 ntBASIC2.14□□□□□ -2.07
NOTCH3Q9UM47 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.14□□□□□ -2.07
NOTCH3Q9UM47 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC2.14□□□□□ -2.07
NOTCH3Q9UM47 RNA5SP458-201ENST00000516188 119 ntBASIC2.14□□□□□ -2.07
NOTCH3Q9UM47 SNORD116-25-201ENST00000516517 92 ntBASIC2.14□□□□□ -2.07
NOTCH3Q9UM47 AC245166.1-201ENST00000521012 253 ntBASIC2.14□□□□□ -2.07
NOTCH3Q9UM47 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.14□□□□□ -2.07
NOTCH3Q9UM47 AP004242.1-201ENST00000533701 349 ntBASIC2.14□□□□□ -2.07
NOTCH3Q9UM47 UBL5P4-201ENST00000562584 236 ntBASIC2.14□□□□□ -2.07
NOTCH3Q9UM47 AC123786.2-201ENST00000603459 275 ntBASIC2.14□□□□□ -2.07
NOTCH3Q9UM47 U7.8-201ENST00000619968 63 ntBASIC2.14□□□□□ -2.07
NOTCH3Q9UM47 AC090617.7-201ENST00000623952 126 ntBASIC2.14□□□□□ -2.07
NOTCH3Q9UM47 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
NOTCH3Q9UM47 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.13□□□□□ -2.07
NOTCH3Q9UM47 AP001486.2-201ENST00000561652 5113 ntBASIC2.13□□□□□ -2.07
NOTCH3Q9UM47 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
NOTCH3Q9UM47 Y_RNA.286-201ENST00000364813 102 ntBASIC2.13□□□□□ -2.07
NOTCH3Q9UM47 SNORA9.2-201ENST00000365361 133 ntBASIC2.13□□□□□ -2.07
NOTCH3Q9UM47 AL390729.2-201ENST00000416137 156 ntBASIC2.13□□□□□ -2.07
NOTCH3Q9UM47 LAMTOR3P1-201ENST00000428620 370 ntBASIC2.13□□□□□ -2.07
NOTCH3Q9UM47 SEPT7P4-201ENST00000437076 306 ntBASIC2.13□□□□□ -2.07
NOTCH3Q9UM47 AC005002.2-201ENST00000438228 269 ntBASIC2.13□□□□□ -2.07
NOTCH3Q9UM47 RPL23AP58-201ENST00000440453 469 ntBASIC2.13□□□□□ -2.07
NOTCH3Q9UM47 AC016700.2-201ENST00000446011 156 ntBASIC2.13□□□□□ -2.07
NOTCH3Q9UM47 RN7SL20P-201ENST00000488827 297 ntBASIC2.13□□□□□ -2.07
NOTCH3Q9UM47 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.13□□□□□ -2.07
NOTCH3Q9UM47 RN7SKP272-201ENST00000516988 232 ntBASIC2.13□□□□□ -2.07
NOTCH3Q9UM47 RNU6-840P-201ENST00000517275 65 ntBASIC2.13□□□□□ -2.07
NOTCH3Q9UM47 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.13□□□□□ -2.07
NOTCH3Q9UM47 AC107016.2-201ENST00000547968 190 ntBASIC2.13□□□□□ -2.07
NOTCH3Q9UM47 AC055872.1-201ENST00000570978 278 ntBASIC2.13□□□□□ -2.07
NOTCH3Q9UM47 MIR4648-201ENST00000580107 72 ntBASIC2.13□□□□□ -2.07
NOTCH3Q9UM47 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
NOTCH3Q9UM47 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.13□□□□□ -2.07
NOTCH3Q9UM47 AC008873.1-201ENST00000625051 138 ntBASIC2.13□□□□□ -2.07
NOTCH3Q9UM47 MIR4496-201ENST00000635896 61 ntBASIC2.13□□□□□ -2.07
NOTCH3Q9UM47 AC135776.4-201ENST00000624300 1904 ntBASIC2.13□□□□□ -2.07
NOTCH3Q9UM47 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.13□□□□□ -2.07
NOTCH3Q9UM47 AC110774.1-201ENST00000623567 2018 ntBASIC2.13□□□□□ -2.07
NOTCH3Q9UM47 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.13□□□□□ -2.07
NOTCH3Q9UM47 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC2.13□□□□□ -2.07
NOTCH3Q9UM47 Y_RNA.75-201ENST00000362927 97 ntBASIC2.13□□□□□ -2.07
NOTCH3Q9UM47 RNU6-263P-201ENST00000363811 107 ntBASIC2.13□□□□□ -2.07
NOTCH3Q9UM47 Y_RNA.357-201ENST00000365487 109 ntBASIC2.13□□□□□ -2.07
NOTCH3Q9UM47 RNU6-21P-201ENST00000384710 107 ntBASIC2.13□□□□□ -2.07
NOTCH3Q9UM47 MIR1289-2-201ENST00000408360 111 ntBASIC2.13□□□□□ -2.07
NOTCH3Q9UM47 RNU6-712P-201ENST00000410558 100 ntBASIC2.13□□□□□ -2.07
NOTCH3Q9UM47 RNU6-1245P-201ENST00000411130 106 ntBASIC2.13□□□□□ -2.07
NOTCH3Q9UM47 PPP1R11P2-201ENST00000423543 382 ntBASIC2.13□□□□□ -2.07
NOTCH3Q9UM47 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.13□□□□□ -2.07
NOTCH3Q9UM47 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.13□□□□□ -2.07
NOTCH3Q9UM47 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.13□□□□□ -2.07
NOTCH3Q9UM47 RPS15AP34-201ENST00000487776 387 ntBASIC2.13□□□□□ -2.07
NOTCH3Q9UM47 ENSA-210ENST00000503241 574 ntTSL 3 BASIC2.13□□□□□ -2.07
NOTCH3Q9UM47 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
NOTCH3Q9UM47 SNORA31.22-201ENST00000517204 135 ntBASIC2.13□□□□□ -2.07
NOTCH3Q9UM47 MIR4679-2-201ENST00000578358 77 ntBASIC2.13□□□□□ -2.07
NOTCH3Q9UM47 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC2.13□□□□□ -2.07
NOTCH3Q9UM47 AC008121.1-201ENST00000603244 268 ntBASIC2.13□□□□□ -2.07
NOTCH3Q9UM47 MIR6817-201ENST00000615588 66 ntBASIC2.13□□□□□ -2.07
NOTCH3Q9UM47 AC048347.1-201ENST00000624621 427 ntBASIC2.13□□□□□ -2.07
NOTCH3Q9UM47 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
NOTCH3Q9UM47 Y_RNA.215-201ENST00000364204 112 ntBASIC2.12□□□□□ -2.07
NOTCH3Q9UM47 RNU6-1175P-201ENST00000365200 107 ntBASIC2.12□□□□□ -2.07
NOTCH3Q9UM47 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.12□□□□□ -2.07
NOTCH3Q9UM47 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.12□□□□□ -2.07
NOTCH3Q9UM47 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC2.12□□□□□ -2.07
NOTCH3Q9UM47 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC2.12□□□□□ -2.07
NOTCH3Q9UM47 RPL23AP75-201ENST00000491601 451 ntBASIC2.12□□□□□ -2.07
NOTCH3Q9UM47 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.12□□□□□ -2.07
NOTCH3Q9UM47 RNU6-143P-201ENST00000516942 93 ntBASIC2.12□□□□□ -2.07
NOTCH3Q9UM47 IGKV2D-36-201ENST00000518643 226 ntBASIC2.12□□□□□ -2.07
NOTCH3Q9UM47 NACAP3-201ENST00000552100 481 ntBASIC2.12□□□□□ -2.07
NOTCH3Q9UM47 DNAJC19P2-201ENST00000593340 302 ntBASIC2.12□□□□□ -2.07
NOTCH3Q9UM47 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.12□□□□□ -2.07
NOTCH3Q9UM47 AL645944.1-201ENST00000603857 493 ntBASIC2.12□□□□□ -2.07
NOTCH3Q9UM47 AC080128.1-201ENST00000474389 1917 ntBASIC2.12□□□□□ -2.07
NOTCH3Q9UM47 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.12□□□□□ -2.07
NOTCH3Q9UM47 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.12□□□□□ -2.07
NOTCH3Q9UM47 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.12□□□□□ -2.07
NOTCH3Q9UM47 RNU6-428P-201ENST00000362942 107 ntBASIC2.12□□□□□ -2.07
NOTCH3Q9UM47 RNU6-239P-201ENST00000390990 99 ntBASIC2.12□□□□□ -2.07
NOTCH3Q9UM47 FTH1P6-201ENST00000430768 320 ntBASIC2.12□□□□□ -2.07
NOTCH3Q9UM47 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.12□□□□□ -2.07
NOTCH3Q9UM47 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.12□□□□□ -2.07
NOTCH3Q9UM47 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.12□□□□□ -2.07
NOTCH3Q9UM47 RNU6-1114P-201ENST00000516022 107 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms