Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC3.38□□□□□ -1.87
SHROOM4Q9ULL8 Y_RNA.151-201ENST00000363566 112 ntBASIC3.38□□□□□ -1.87
SHROOM4Q9ULL8 RNU6-234P-201ENST00000365229 104 ntBASIC3.38□□□□□ -1.87
SHROOM4Q9ULL8 SNORA29-201ENST00000384183 140 ntBASIC3.38□□□□□ -1.87
SHROOM4Q9ULL8 MIR208B-201ENST00000401172 77 ntBASIC3.38□□□□□ -1.87
SHROOM4Q9ULL8 MTND4LP16-201ENST00000440828 295 ntBASIC3.38□□□□□ -1.87
SHROOM4Q9ULL8 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC3.38□□□□□ -1.87
SHROOM4Q9ULL8 RNA5SP82-201ENST00000516707 92 ntBASIC3.38□□□□□ -1.87
SHROOM4Q9ULL8 AC019193.3-201ENST00000609144 554 ntBASIC3.38□□□□□ -1.87
SHROOM4Q9ULL8 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC3.38□□□□□ -1.87
SHROOM4Q9ULL8 AC137590.2-201ENST00000619709 240 ntBASIC3.38□□□□□ -1.87
SHROOM4Q9ULL8 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SHROOM4Q9ULL8 SNORA32.2-201ENST00000384049 122 ntBASIC3.37□□□□□ -1.87
SHROOM4Q9ULL8 SNORA36A-201ENST00000384221 132 ntBASIC3.37□□□□□ -1.87
SHROOM4Q9ULL8 RNU6-1093P-201ENST00000391194 107 ntBASIC3.37□□□□□ -1.87
SHROOM4Q9ULL8 RNU6-510P-201ENST00000391239 108 ntBASIC3.37□□□□□ -1.87
SHROOM4Q9ULL8 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC3.37□□□□□ -1.87
SHROOM4Q9ULL8 AL513185.2-201ENST00000425543 193 ntBASIC3.37□□□□□ -1.87
SHROOM4Q9ULL8 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC3.37□□□□□ -1.87
SHROOM4Q9ULL8 HMGN2P18-201ENST00000450680 270 ntBASIC3.37□□□□□ -1.87
SHROOM4Q9ULL8 MTCYBP18-201ENST00000501056 747 ntBASIC3.37□□□□□ -1.87
SHROOM4Q9ULL8 MIR449C-201ENST00000516047 92 ntBASIC3.37□□□□□ -1.87
SHROOM4Q9ULL8 RNU6-1314P-201ENST00000517139 104 ntBASIC3.37□□□□□ -1.87
SHROOM4Q9ULL8 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SHROOM4Q9ULL8 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.37□□□□□ -1.87
SHROOM4Q9ULL8 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC3.37□□□□□ -1.87
SHROOM4Q9ULL8 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC3.37□□□□□ -1.87
SHROOM4Q9ULL8 RNU6-784P-201ENST00000384330 106 ntBASIC3.36□□□□□ -1.87
SHROOM4Q9ULL8 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC3.36□□□□□ -1.87
SHROOM4Q9ULL8 RNA5SP494-201ENST00000410653 129 ntBASIC3.36□□□□□ -1.87
SHROOM4Q9ULL8 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC3.36□□□□□ -1.87
SHROOM4Q9ULL8 PPP1R2P5-201ENST00000457256 603 ntBASIC3.36□□□□□ -1.87
SHROOM4Q9ULL8 RNU7-187P-201ENST00000458985 68 ntBASIC3.36□□□□□ -1.87
SHROOM4Q9ULL8 AC055731.1-201ENST00000474387 401 ntBASIC3.36□□□□□ -1.87
SHROOM4Q9ULL8 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.36□□□□□ -1.87
SHROOM4Q9ULL8 AF235103.2-201ENST00000525753 346 ntBASIC3.36□□□□□ -1.87
SHROOM4Q9ULL8 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC3.36□□□□□ -1.87
SHROOM4Q9ULL8 POLR3GP2-201ENST00000588366 668 ntBASIC3.36□□□□□ -1.87
SHROOM4Q9ULL8 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
SHROOM4Q9ULL8 SNORD115-3-201ENST00000363100 82 ntBASIC3.35□□□□□ -1.87
SHROOM4Q9ULL8 RNA5SP138-201ENST00000365098 114 ntBASIC3.35□□□□□ -1.87
SHROOM4Q9ULL8 RNU6-1286P-201ENST00000383871 107 ntBASIC3.35□□□□□ -1.87
SHROOM4Q9ULL8 MIR518A2-201ENST00000384966 87 ntBASIC3.35□□□□□ -1.87
SHROOM4Q9ULL8 AL355497.1-201ENST00000406262 551 ntBASIC3.35□□□□□ -1.87
SHROOM4Q9ULL8 MIR1262-201ENST00000408276 93 ntBASIC3.35□□□□□ -1.87
SHROOM4Q9ULL8 RNU6ATAC25P-201ENST00000408798 117 ntBASIC3.35□□□□□ -1.87
SHROOM4Q9ULL8 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC3.35□□□□□ -1.87
SHROOM4Q9ULL8 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.35□□□□□ -1.87
SHROOM4Q9ULL8 MTND1P11-201ENST00000456661 876 ntBASIC3.35□□□□□ -1.87
SHROOM4Q9ULL8 RNU7-66P-201ENST00000459469 62 ntBASIC3.35□□□□□ -1.87
SHROOM4Q9ULL8 RPS23P5-201ENST00000495419 428 ntBASIC3.35□□□□□ -1.87
SHROOM4Q9ULL8 AC005741.1-201ENST00000511094 432 ntBASIC3.35□□□□□ -1.87
SHROOM4Q9ULL8 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC3.35□□□□□ -1.87
SHROOM4Q9ULL8 MIR3976-201ENST00000606807 139 ntBASIC3.35□□□□□ -1.87
SHROOM4Q9ULL8 U6atac.1-201ENST00000616025 117 ntBASIC3.35□□□□□ -1.87
SHROOM4Q9ULL8 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.35□□□□□ -1.87
SHROOM4Q9ULL8 Y_RNA.191-201ENST00000363972 113 ntBASIC3.35□□□□□ -1.87
SHROOM4Q9ULL8 RNU6-438P-201ENST00000365561 103 ntBASIC3.35□□□□□ -1.87
SHROOM4Q9ULL8 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC3.35□□□□□ -1.87
SHROOM4Q9ULL8 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC3.35□□□□□ -1.87
SHROOM4Q9ULL8 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC3.35□□□□□ -1.87
SHROOM4Q9ULL8 AL022345.1-201ENST00000607292 135 ntBASIC3.35□□□□□ -1.87
SHROOM4Q9ULL8 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.35□□□□□ -1.87
SHROOM4Q9ULL8 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC3.35□□□□□ -1.87
SHROOM4Q9ULL8 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SHROOM4Q9ULL8 AL391987.6-201ENST00000305671 199 ntBASIC3.34□□□□□ -1.88
SHROOM4Q9ULL8 SNORD14D-201ENST00000384390 87 ntBASIC3.34□□□□□ -1.88
SHROOM4Q9ULL8 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
SHROOM4Q9ULL8 MTND1P4-201ENST00000435196 415 ntBASIC3.34□□□□□ -1.88
SHROOM4Q9ULL8 RNU1-123P-201ENST00000458950 160 ntBASIC3.34□□□□□ -1.88
SHROOM4Q9ULL8 RNU5F-4P-201ENST00000516581 114 ntBASIC3.34□□□□□ -1.88
SHROOM4Q9ULL8 MRPS36P4-201ENST00000534436 298 ntBASIC3.34□□□□□ -1.88
SHROOM4Q9ULL8 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC3.34□□□□□ -1.88
SHROOM4Q9ULL8 AC090517.1-201ENST00000569307 266 ntBASIC3.34□□□□□ -1.88
SHROOM4Q9ULL8 AC122108.2-201ENST00000611946 526 ntBASIC3.34□□□□□ -1.88
SHROOM4Q9ULL8 Y_RNA.99-201ENST00000363138 105 ntBASIC3.33□□□□□ -1.88
SHROOM4Q9ULL8 Y_RNA.212-201ENST00000364177 102 ntBASIC3.33□□□□□ -1.88
SHROOM4Q9ULL8 RNU6-968P-201ENST00000384076 107 ntBASIC3.33□□□□□ -1.88
SHROOM4Q9ULL8 RNU6-95P-201ENST00000384697 107 ntBASIC3.33□□□□□ -1.88
SHROOM4Q9ULL8 RNU11-3P-201ENST00000391111 133 ntBASIC3.33□□□□□ -1.88
SHROOM4Q9ULL8 RNU2-41P-201ENST00000410991 178 ntBASIC3.33□□□□□ -1.88
SHROOM4Q9ULL8 ACA59.1-201ENST00000515966 143 ntBASIC3.33□□□□□ -1.88
SHROOM4Q9ULL8 RNU6-864P-201ENST00000516256 108 ntBASIC3.33□□□□□ -1.88
SHROOM4Q9ULL8 AP005639.2-201ENST00000527592 928 ntBASIC3.33□□□□□ -1.88
SHROOM4Q9ULL8 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.33□□□□□ -1.88
SHROOM4Q9ULL8 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.33□□□□□ -1.88
SHROOM4Q9ULL8 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.33□□□□□ -1.88
SHROOM4Q9ULL8 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC3.33□□□□□ -1.88
SHROOM4Q9ULL8 AC146944.4-201ENST00000602697 718 ntBASIC3.33□□□□□ -1.88
SHROOM4Q9ULL8 AC092794.1-201ENST00000612734 582 ntBASIC3.33□□□□□ -1.88
SHROOM4Q9ULL8 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.33□□□□□ -1.88
SHROOM4Q9ULL8 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC3.32□□□□□ -1.88
SHROOM4Q9ULL8 Y_RNA.327-201ENST00000365201 102 ntBASIC3.32□□□□□ -1.88
SHROOM4Q9ULL8 IPO7P1-201ENST00000442031 636 ntBASIC3.32□□□□□ -1.88
SHROOM4Q9ULL8 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC3.32□□□□□ -1.88
SHROOM4Q9ULL8 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC3.32□□□□□ -1.88
SHROOM4Q9ULL8 AC009994.1-201ENST00000606889 253 ntBASIC3.32□□□□□ -1.88
SHROOM4Q9ULL8 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.32□□□□□ -1.88
SHROOM4Q9ULL8 AC006504.8-201ENST00000621046 635 ntBASIC3.32□□□□□ -1.88
SHROOM4Q9ULL8 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 600.6 ms