Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 RNU7-4P-201ENST00000516961 62 ntBASIC2.4□□□□□ -2.03
SIX4Q9UIU6 RNU1-104P-201ENST00000517280 175 ntBASIC2.4□□□□□ -2.03
SIX4Q9UIU6 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.4□□□□□ -2.03
SIX4Q9UIU6 AC115990.1-201ENST00000526957 301 ntBASIC2.4□□□□□ -2.03
SIX4Q9UIU6 AP002770.2-201ENST00000543613 532 ntBASIC2.4□□□□□ -2.03
SIX4Q9UIU6 AC016256.1-201ENST00000547971 354 ntBASIC2.4□□□□□ -2.03
SIX4Q9UIU6 AC021231.3-201ENST00000558497 370 ntBASIC2.4□□□□□ -2.03
SIX4Q9UIU6 MIR4680-201ENST00000580906 66 ntBASIC2.4□□□□□ -2.03
SIX4Q9UIU6 Z98751.3-201ENST00000604447 521 ntBASIC2.4□□□□□ -2.03
SIX4Q9UIU6 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.4□□□□□ -2.03
SIX4Q9UIU6 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.4□□□□□ -2.03
SIX4Q9UIU6 MIR4272-201ENST00000635924 64 ntBASIC2.4□□□□□ -2.03
SIX4Q9UIU6 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.4□□□□□ -2.03
SIX4Q9UIU6 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.4□□□□□ -2.03
SIX4Q9UIU6 Z75746.1-201ENST00000440243 2080 ntBASIC2.4□□□□□ -2.03
SIX4Q9UIU6 AC091812.1-201ENST00000432235 1948 ntBASIC2.39□□□□□ -2.03
SIX4Q9UIU6 Y_RNA.39-201ENST00000362620 98 ntBASIC2.39□□□□□ -2.03
SIX4Q9UIU6 RNU1-57P-201ENST00000384491 166 ntBASIC2.39□□□□□ -2.03
SIX4Q9UIU6 RNU6-738P-201ENST00000384531 106 ntBASIC2.39□□□□□ -2.03
SIX4Q9UIU6 snosnR66.1-201ENST00000391095 99 ntBASIC2.39□□□□□ -2.03
SIX4Q9UIU6 AL121594.1-201ENST00000475906 575 ntBASIC2.39□□□□□ -2.03
SIX4Q9UIU6 RNU1-41P-201ENST00000516161 162 ntBASIC2.39□□□□□ -2.03
SIX4Q9UIU6 RNU1-48P-201ENST00000516400 162 ntBASIC2.39□□□□□ -2.03
SIX4Q9UIU6 Y_RNA.706-201ENST00000516933 99 ntBASIC2.39□□□□□ -2.03
SIX4Q9UIU6 SCARNA11.3-201ENST00000517276 130 ntBASIC2.39□□□□□ -2.03
SIX4Q9UIU6 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.39□□□□□ -2.03
SIX4Q9UIU6 COX6CP5-201ENST00000527162 228 ntBASIC2.39□□□□□ -2.03
SIX4Q9UIU6 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.39□□□□□ -2.03
SIX4Q9UIU6 AC100812.1-201ENST00000607622 580 ntBASIC2.39□□□□□ -2.03
SIX4Q9UIU6 AC013412.1-201ENST00000610687 192 ntBASIC2.39□□□□□ -2.03
SIX4Q9UIU6 AC009831.4-201ENST00000620744 325 ntBASIC2.39□□□□□ -2.03
SIX4Q9UIU6 AL606534.2-204ENST00000635008 178 ntBASIC2.39□□□□□ -2.03
SIX4Q9UIU6 MIR7515-201ENST00000637837 67 ntBASIC2.39□□□□□ -2.03
SIX4Q9UIU6 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
SIX4Q9UIU6 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
SIX4Q9UIU6 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.39□□□□□ -2.03
SIX4Q9UIU6 RNU6-222P-201ENST00000362438 107 ntBASIC2.38□□□□□ -2.03
SIX4Q9UIU6 Y_RNA.106-201ENST00000363189 100 ntBASIC2.38□□□□□ -2.03
SIX4Q9UIU6 Y_RNA.158-201ENST00000363651 101 ntBASIC2.38□□□□□ -2.03
SIX4Q9UIU6 SNORD115-32-201ENST00000364079 82 ntBASIC2.38□□□□□ -2.03
SIX4Q9UIU6 RNU6-461P-201ENST00000364195 107 ntBASIC2.38□□□□□ -2.03
SIX4Q9UIU6 Y_RNA.422-201ENST00000384054 114 ntBASIC2.38□□□□□ -2.03
SIX4Q9UIU6 U8.10-201ENST00000384260 133 ntBASIC2.38□□□□□ -2.03
SIX4Q9UIU6 Y_RNA.645-201ENST00000391229 102 ntBASIC2.38□□□□□ -2.03
SIX4Q9UIU6 MTCYBP2-201ENST00000407745 171 ntBASIC2.38□□□□□ -2.03
SIX4Q9UIU6 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC2.38□□□□□ -2.03
SIX4Q9UIU6 AC097463.2-201ENST00000421074 142 ntBASIC2.38□□□□□ -2.03
SIX4Q9UIU6 AL356320.1-201ENST00000429616 163 ntBASIC2.38□□□□□ -2.03
SIX4Q9UIU6 OR2AQ1P-201ENST00000451972 200 ntBASIC2.38□□□□□ -2.03
SIX4Q9UIU6 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.38□□□□□ -2.03
SIX4Q9UIU6 U8.22-201ENST00000459141 133 ntBASIC2.38□□□□□ -2.03
SIX4Q9UIU6 RN7SL429P-201ENST00000479090 223 ntBASIC2.38□□□□□ -2.03
SIX4Q9UIU6 RN7SL489P-201ENST00000486185 223 ntBASIC2.38□□□□□ -2.03
SIX4Q9UIU6 RN7SL327P-201ENST00000488659 223 ntBASIC2.38□□□□□ -2.03
SIX4Q9UIU6 HMGB1P35-201ENST00000503360 598 ntBASIC2.38□□□□□ -2.03
SIX4Q9UIU6 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.38□□□□□ -2.03
SIX4Q9UIU6 ANXA2P1-201ENST00000505539 926 ntBASIC2.38□□□□□ -2.03
SIX4Q9UIU6 RNU6-327P-201ENST00000516270 127 ntBASIC2.38□□□□□ -2.03
SIX4Q9UIU6 SNORA31.15-201ENST00000516771 132 ntBASIC2.38□□□□□ -2.03
SIX4Q9UIU6 AC109329.1-201ENST00000518744 317 ntBASIC2.38□□□□□ -2.03
SIX4Q9UIU6 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC2.38□□□□□ -2.03
SIX4Q9UIU6 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.38□□□□□ -2.03
SIX4Q9UIU6 AC006600.1-201ENST00000572529 153 ntBASIC2.38□□□□□ -2.03
SIX4Q9UIU6 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.38□□□□□ -2.03
SIX4Q9UIU6 7SK.7-201ENST00000603504 247 ntBASIC2.38□□□□□ -2.03
SIX4Q9UIU6 AC005034.5-201ENST00000604219 466 ntBASIC2.38□□□□□ -2.03
SIX4Q9UIU6 AL034555.1-201ENST00000604816 211 ntBASIC2.38□□□□□ -2.03
SIX4Q9UIU6 AC116312.1-201ENST00000606841 314 ntBASIC2.38□□□□□ -2.03
SIX4Q9UIU6 PART1_1.1-201ENST00000611761 217 ntBASIC2.38□□□□□ -2.03
SIX4Q9UIU6 RMST_6.1-201ENST00000611980 203 ntBASIC2.38□□□□□ -2.03
SIX4Q9UIU6 RN7SL853P-201ENST00000617250 223 ntBASIC2.38□□□□□ -2.03
SIX4Q9UIU6 AC080100.1-201ENST00000624239 5356 ntBASIC2.38□□□□□ -2.03
SIX4Q9UIU6 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.38□□□□□ -2.03
SIX4Q9UIU6 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.38□□□□□ -2.03
SIX4Q9UIU6 AC005592.1-201ENST00000566527 1640 ntBASIC2.38□□□□□ -2.03
SIX4Q9UIU6 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
SIX4Q9UIU6 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
SIX4Q9UIU6 RNU6-655P-201ENST00000362858 107 ntBASIC2.37□□□□□ -2.03
SIX4Q9UIU6 RNU6-1210P-201ENST00000363775 107 ntBASIC2.37□□□□□ -2.03
SIX4Q9UIU6 Y_RNA.358-201ENST00000365491 99 ntBASIC2.37□□□□□ -2.03
SIX4Q9UIU6 RNU6-17P-201ENST00000384245 107 ntBASIC2.37□□□□□ -2.03
SIX4Q9UIU6 RNU6-18P-201ENST00000384527 107 ntBASIC2.37□□□□□ -2.03
SIX4Q9UIU6 Y_RNA.527-201ENST00000384573 102 ntBASIC2.37□□□□□ -2.03
SIX4Q9UIU6 SNORA11.2-201ENST00000408318 127 ntBASIC2.37□□□□□ -2.03
SIX4Q9UIU6 Y_RNA.605-201ENST00000410577 105 ntBASIC2.37□□□□□ -2.03
SIX4Q9UIU6 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.37□□□□□ -2.03
SIX4Q9UIU6 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.37□□□□□ -2.03
SIX4Q9UIU6 AC012306.1-201ENST00000423267 114 ntBASIC2.37□□□□□ -2.03
SIX4Q9UIU6 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.37□□□□□ -2.03
SIX4Q9UIU6 EIF4EP4-201ENST00000424916 578 ntBASIC2.37□□□□□ -2.03
SIX4Q9UIU6 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
SIX4Q9UIU6 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.37□□□□□ -2.03
SIX4Q9UIU6 AL445687.1-201ENST00000439946 251 ntBASIC2.37□□□□□ -2.03
SIX4Q9UIU6 AC112492.4-201ENST00000456549 352 ntBASIC2.37□□□□□ -2.03
SIX4Q9UIU6 RNU7-87P-201ENST00000459343 62 ntBASIC2.37□□□□□ -2.03
SIX4Q9UIU6 RNU2-53P-201ENST00000516257 147 ntBASIC2.37□□□□□ -2.03
SIX4Q9UIU6 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.37□□□□□ -2.03
SIX4Q9UIU6 MIR1273D-201ENST00000577266 86 ntBASIC2.37□□□□□ -2.03
SIX4Q9UIU6 AC090616.3-201ENST00000582184 217 ntBASIC2.37□□□□□ -2.03
SIX4Q9UIU6 MIR5188-201ENST00000583467 113 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms