| CNTNAP2 | Q9UHC6 | MIR4282-201 | ENST00000583613 | 67 nt | BASIC | 2.73 | □□□□□ -1.97 | | |
| CNTNAP2 | Q9UHC6 | AC009318.2-201 | ENST00000610917 | 651 nt | BASIC | 2.73 | □□□□□ -1.97 | | |
| CNTNAP2 | Q9UHC6 | U6.106-201 | ENST00000636360 | 105 nt | BASIC | 2.73 | □□□□□ -1.97 | | |
| CNTNAP2 | Q9UHC6 | SCN1A-219 | ENST00000641575 | 12874 nt | APPRIS ALT1 BASIC | 2.73 | □□□□□ -1.97 | | |
| CNTNAP2 | Q9UHC6 | IL33-203 | ENST00000456383 | 2501 nt | TSL 5 BASIC | 2.73 | □□□□□ -1.97 | | |
| CNTNAP2 | Q9UHC6 | Y_RNA.233-201 | ENST00000364407 | 101 nt | BASIC | 2.72 | □□□□□ -1.97 | | |
| CNTNAP2 | Q9UHC6 | Y_RNA.292-201 | ENST00000364904 | 97 nt | BASIC | 2.72 | □□□□□ -1.97 | | |
| CNTNAP2 | Q9UHC6 | MIR628-201 | ENST00000385229 | 95 nt | BASIC | 2.72 | □□□□□ -1.97 | | |
| CNTNAP2 | Q9UHC6 | RNU2-43P-201 | ENST00000410306 | 190 nt | BASIC | 2.72 | □□□□□ -1.97 | | |
| CNTNAP2 | Q9UHC6 | RPL19P1-201 | ENST00000411635 | 428 nt | BASIC | 2.72 | □□□□□ -1.97 | | |
| CNTNAP2 | Q9UHC6 | TTTY8-202 | ENST00000426035 | 518 nt | TSL 1 (best) BASIC | 2.72 | □□□□□ -1.97 | | |
| CNTNAP2 | Q9UHC6 | NDUFB4P6-201 | ENST00000436819 | 366 nt | BASIC | 2.72 | □□□□□ -1.97 | | |
| CNTNAP2 | Q9UHC6 | TTTY8B-202 | ENST00000455570 | 518 nt | TSL 1 (best) BASIC | 2.72 | □□□□□ -1.97 | | |
| CNTNAP2 | Q9UHC6 | AC092798.1-201 | ENST00000458542 | 409 nt | BASIC | 2.72 | □□□□□ -1.97 | | |
| CNTNAP2 | Q9UHC6 | YWHAEP4-201 | ENST00000505390 | 198 nt | BASIC | 2.72 | □□□□□ -1.97 | | |
| CNTNAP2 | Q9UHC6 | RNA5SP24-201 | ENST00000516478 | 95 nt | BASIC | 2.72 | □□□□□ -1.97 | | |
| CNTNAP2 | Q9UHC6 | MIR4273-201 | ENST00000582824 | 84 nt | BASIC | 2.72 | □□□□□ -1.97 | | |
| CNTNAP2 | Q9UHC6 | LINC01533-205 | ENST00000593056 | 607 nt | TSL 3 BASIC | 2.72 | □□□□□ -1.97 | | |
| CNTNAP2 | Q9UHC6 | Z83818.1-201 | ENST00000603584 | 150 nt | BASIC | 2.72 | □□□□□ -1.97 | | |
| CNTNAP2 | Q9UHC6 | OGN-201 | ENST00000262551 | 2971 nt | APPRIS P1 TSL 5 BASIC | 2.72 | □□□□□ -1.97 | | |
| CNTNAP2 | Q9UHC6 | FBXO11-201 | ENST00000402508 | 3844 nt | APPRIS P1 TSL 1 (best) BASIC | 2.72 | □□□□□ -1.97 | | |
| CNTNAP2 | Q9UHC6 | RGS22-214 | ENST00000523287 | 4033 nt | APPRIS ALT2 TSL 2 BASIC | 2.72 | □□□□□ -1.97 | | |
| CNTNAP2 | Q9UHC6 | AC091564.4-201 | ENST00000533934 | 2194 nt | BASIC | 2.72 | □□□□□ -1.97 | | |
| CNTNAP2 | Q9UHC6 | RNU6-1020P-201 | ENST00000363684 | 107 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| CNTNAP2 | Q9UHC6 | RNA5SP456-201 | ENST00000364002 | 114 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| CNTNAP2 | Q9UHC6 | RNU6-153P-201 | ENST00000364422 | 104 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| CNTNAP2 | Q9UHC6 | RNU6-923P-201 | ENST00000364753 | 107 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| CNTNAP2 | Q9UHC6 | RNU6-384P-201 | ENST00000364900 | 104 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| CNTNAP2 | Q9UHC6 | RNU6-290P-201 | ENST00000365212 | 101 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| CNTNAP2 | Q9UHC6 | Y_RNA.358-201 | ENST00000365491 | 99 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| CNTNAP2 | Q9UHC6 | MIR186-201 | ENST00000384988 | 86 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| CNTNAP2 | Q9UHC6 | RNU6-1154P-201 | ENST00000391001 | 104 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| CNTNAP2 | Q9UHC6 | SNORA53-201 | ENST00000391141 | 249 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| CNTNAP2 | Q9UHC6 | AL359511.1-201 | ENST00000402970 | 211 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| CNTNAP2 | Q9UHC6 | RNU6ATAC16P-201 | ENST00000408591 | 138 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| CNTNAP2 | Q9UHC6 | AL353621.1-201 | ENST00000418219 | 243 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| CNTNAP2 | Q9UHC6 | LINC02331-201 | ENST00000418927 | 602 nt | TSL 5 BASIC | 2.71 | □□□□□ -1.98 | | |
| CNTNAP2 | Q9UHC6 | AL121890.1-201 | ENST00000435457 | 205 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| CNTNAP2 | Q9UHC6 | AL513124.1-201 | ENST00000450410 | 614 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| CNTNAP2 | Q9UHC6 | RPS29P27-201 | ENST00000463711 | 170 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| CNTNAP2 | Q9UHC6 | AC087477.1-201 | ENST00000465747 | 340 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| CNTNAP2 | Q9UHC6 | AC008413.1-201 | ENST00000511864 | 177 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| CNTNAP2 | Q9UHC6 | RNU6-1012P-201 | ENST00000516606 | 109 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| CNTNAP2 | Q9UHC6 | RNU6-914P-201 | ENST00000516749 | 109 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| CNTNAP2 | Q9UHC6 | MDM2-232 | ENST00000544561 | 213 nt | TSL 5 BASIC | 2.71 | □□□□□ -1.98 | | |
| CNTNAP2 | Q9UHC6 | SNORD53-201 | ENST00000579969 | 78 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| CNTNAP2 | Q9UHC6 | OR1M4P-201 | ENST00000589199 | 287 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| CNTNAP2 | Q9UHC6 | AP001485.1-201 | ENST00000604799 | 199 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| CNTNAP2 | Q9UHC6 | AC072026.1-201 | ENST00000605023 | 201 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| CNTNAP2 | Q9UHC6 | AC240442.1-201 | ENST00000616055 | 283 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| CNTNAP2 | Q9UHC6 | AC064859.1-201 | ENST00000624741 | 174 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| CNTNAP2 | Q9UHC6 | AP003481.1-201 | ENST00000637808 | 351 nt | TSL 5 BASIC | 2.71 | □□□□□ -1.98 | | |
| CNTNAP2 | Q9UHC6 | BCHE-201 | ENST00000264381 | 2454 nt | APPRIS P1 TSL 1 (best) BASIC | 2.71 | □□□□□ -1.98 | | |
| CNTNAP2 | Q9UHC6 | LRRC6-212 | ENST00000618342 | 1754 nt | APPRIS ALT1 TSL 5 BASIC | 2.71 | □□□□□ -1.98 | | |
| CNTNAP2 | Q9UHC6 | AC007785.2-201 | ENST00000598627 | 1916 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| CNTNAP2 | Q9UHC6 | C1orf141-202 | ENST00000371006 | 2053 nt | APPRIS P3 TSL 2 BASIC | 2.71 | □□□□□ -1.98 | | |
| CNTNAP2 | Q9UHC6 | Y_RNA.261-201 | ENST00000364631 | 102 nt | BASIC | 2.7 | □□□□□ -1.98 | | |
| CNTNAP2 | Q9UHC6 | Y_RNA.439-201 | ENST00000384119 | 94 nt | BASIC | 2.7 | □□□□□ -1.98 | | |
| CNTNAP2 | Q9UHC6 | Y_RNA.480-201 | ENST00000384364 | 102 nt | BASIC | 2.7 | □□□□□ -1.98 | | |
| CNTNAP2 | Q9UHC6 | RNY3P4-201 | ENST00000384428 | 101 nt | BASIC | 2.7 | □□□□□ -1.98 | | |
| CNTNAP2 | Q9UHC6 | Y_RNA.504-201 | ENST00000384481 | 104 nt | BASIC | 2.7 | □□□□□ -1.98 | | |
| CNTNAP2 | Q9UHC6 | TRAJ48-201 | ENST00000390489 | 63 nt | APPRIS P1 BASIC | 2.7 | □□□□□ -1.98 | | |
| CNTNAP2 | Q9UHC6 | Y_RNA.586-201 | ENST00000391146 | 98 nt | BASIC | 2.7 | □□□□□ -1.98 | | |
| CNTNAP2 | Q9UHC6 | RPL23AP58-201 | ENST00000440453 | 469 nt | BASIC | 2.7 | □□□□□ -1.98 | | |
| CNTNAP2 | Q9UHC6 | AC104389.3-201 | ENST00000445629 | 235 nt | BASIC | 2.7 | □□□□□ -1.98 | | |
| CNTNAP2 | Q9UHC6 | RPS29P12-201 | ENST00000460178 | 152 nt | BASIC | 2.7 | □□□□□ -1.98 | | |
| CNTNAP2 | Q9UHC6 | AC114982.1-201 | ENST00000469402 | 321 nt | BASIC | 2.7 | □□□□□ -1.98 | | |
| CNTNAP2 | Q9UHC6 | RPL23AP45-201 | ENST00000476406 | 468 nt | BASIC | 2.7 | □□□□□ -1.98 | | |
| CNTNAP2 | Q9UHC6 | TRBV12-1-201 | ENST00000479785 | 344 nt | BASIC | 2.7 | □□□□□ -1.98 | | |
| CNTNAP2 | Q9UHC6 | RPL30P10-201 | ENST00000488148 | 337 nt | BASIC | 2.7 | □□□□□ -1.98 | | |
| CNTNAP2 | Q9UHC6 | AC110767.1-201 | ENST00000508374 | 239 nt | TSL 3 BASIC | 2.7 | □□□□□ -1.98 | | |
| CNTNAP2 | Q9UHC6 | ACA59.1-201 | ENST00000515966 | 143 nt | BASIC | 2.7 | □□□□□ -1.98 | | |
| CNTNAP2 | Q9UHC6 | Y_RNA.662-201 | ENST00000516028 | 97 nt | BASIC | 2.7 | □□□□□ -1.98 | | |
| CNTNAP2 | Q9UHC6 | AC109479.2-201 | ENST00000517842 | 174 nt | BASIC | 2.7 | □□□□□ -1.98 | | |
| CNTNAP2 | Q9UHC6 | AC093023.1-201 | ENST00000547375 | 507 nt | BASIC | 2.7 | □□□□□ -1.98 | | |
| CNTNAP2 | Q9UHC6 | AL133279.1-202 | ENST00000556789 | 456 nt | TSL 5 BASIC | 2.7 | □□□□□ -1.98 | | |
| CNTNAP2 | Q9UHC6 | AC215217.1-201 | ENST00000562162 | 347 nt | TSL 3 BASIC | 2.7 | □□□□□ -1.98 | | |
| CNTNAP2 | Q9UHC6 | B3GNTL1P2-201 | ENST00000603673 | 288 nt | BASIC | 2.7 | □□□□□ -1.98 | | |
| CNTNAP2 | Q9UHC6 | AL359198.2-201 | ENST00000611836 | 194 nt | BASIC | 2.7 | □□□□□ -1.98 | | |
| CNTNAP2 | Q9UHC6 | GYPB-216 | ENST00000638448 | 363 nt | APPRIS P1 TSL 1 (best) BASIC | 2.7 | □□□□□ -1.98 | | |
| CNTNAP2 | Q9UHC6 | CRISP3-204 | ENST00000433368 | 2205 nt | APPRIS ALT2 TSL 5 BASIC | 2.7 | □□□□□ -1.98 | | |
| CNTNAP2 | Q9UHC6 | ANKRD36C-201 | ENST00000295246 | 2272 nt | TSL 5 BASIC | 2.7 | □□□□□ -1.98 | | |
| CNTNAP2 | Q9UHC6 | NDUFAF4-201 | ENST00000316149 | 2399 nt | APPRIS P1 TSL 1 (best) BASIC | 2.7 | □□□□□ -1.98 | | |
| CNTNAP2 | Q9UHC6 | CYLC2-202 | ENST00000487798 | 2053 nt | APPRIS P1 TSL 5 BASIC | 2.7 | □□□□□ -1.98 | | |
| CNTNAP2 | Q9UHC6 | AC009812.4-201 | ENST00000569134 | 1805 nt | BASIC | 2.7 | □□□□□ -1.98 | | |
| CNTNAP2 | Q9UHC6 | PTPN22-203 | ENST00000460620 | 1794 nt | TSL 1 (best) BASIC | 2.7 | □□□□□ -1.98 | | |
| CNTNAP2 | Q9UHC6 | MTND5P9-201 | ENST00000503854 | 1755 nt | BASIC | 2.7 | □□□□□ -1.98 | | |
| CNTNAP2 | Q9UHC6 | SEMG1-201 | ENST00000372781 | 1662 nt | APPRIS P1 TSL 1 (best) BASIC | 2.7 | □□□□□ -1.98 | | |
| CNTNAP2 | Q9UHC6 | Y_RNA.44-201 | ENST00000362676 | 108 nt | BASIC | 2.69 | □□□□□ -1.98 | | |
| CNTNAP2 | Q9UHC6 | SNORA25.6-201 | ENST00000364121 | 118 nt | BASIC | 2.69 | □□□□□ -1.98 | | |
| CNTNAP2 | Q9UHC6 | Y_RNA.324-201 | ENST00000365165 | 102 nt | BASIC | 2.69 | □□□□□ -1.98 | | |
| CNTNAP2 | Q9UHC6 | Y_RNA.418-201 | ENST00000384029 | 102 nt | BASIC | 2.69 | □□□□□ -1.98 | | |
| CNTNAP2 | Q9UHC6 | RNA5SP252-201 | ENST00000391131 | 119 nt | BASIC | 2.69 | □□□□□ -1.98 | | |
| CNTNAP2 | Q9UHC6 | HMGN2P35-201 | ENST00000412164 | 270 nt | BASIC | 2.69 | □□□□□ -1.98 | | |
| CNTNAP2 | Q9UHC6 | NCKAP5-IT1-201 | ENST00000416437 | 554 nt | TSL 4 BASIC | 2.69 | □□□□□ -1.98 | | |
| CNTNAP2 | Q9UHC6 | AC010154.1-201 | ENST00000425857 | 269 nt | BASIC | 2.69 | □□□□□ -1.98 | | |
| CNTNAP2 | Q9UHC6 | AC090774.1-201 | ENST00000435925 | 246 nt | BASIC | 2.69 | □□□□□ -1.98 | | |
| CNTNAP2 | Q9UHC6 | Z82188.1-201 | ENST00000436709 | 154 nt | BASIC | 2.69 | □□□□□ -1.98 | | |
| CNTNAP2 | Q9UHC6 | Z96811.1-201 | ENST00000445880 | 108 nt | BASIC | 2.69 | □□□□□ -1.98 | | |
| CNTNAP2 | Q9UHC6 | IFNA11P-201 | ENST00000446352 | 526 nt | BASIC | 2.69 | □□□□□ -1.98 | | |