Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 MTND3P16-201ENST00000452205 344 ntBASIC1.3□□□□□ -2.2
CTSFQ9UBX1 SRRM1P2-201ENST00000464531 1192 ntBASIC1.3□□□□□ -2.2
CTSFQ9UBX1 SNORA31.17-201ENST00000516953 127 ntBASIC1.3□□□□□ -2.2
CTSFQ9UBX1 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.3□□□□□ -2.2
CTSFQ9UBX1 SUB1P4-201ENST00000566062 339 ntBASIC1.3□□□□□ -2.2
CTSFQ9UBX1 CYP4A27P-201ENST00000567218 190 ntBASIC1.3□□□□□ -2.2
CTSFQ9UBX1 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.3□□□□□ -2.2
CTSFQ9UBX1 MIR3941-201ENST00000582572 103 ntBASIC1.3□□□□□ -2.2
CTSFQ9UBX1 AC092807.2-201ENST00000609367 243 ntBASIC1.3□□□□□ -2.2
CTSFQ9UBX1 AC005520.5-201ENST00000613926 164 ntBASIC1.3□□□□□ -2.2
CTSFQ9UBX1 AL157834.3-201ENST00000615543 103 ntBASIC1.3□□□□□ -2.2
CTSFQ9UBX1 RNU1-62P-201ENST00000362599 164 ntBASIC1.29□□□□□ -2.2
CTSFQ9UBX1 U8.1-201ENST00000362843 134 ntBASIC1.29□□□□□ -2.2
CTSFQ9UBX1 RNU6-522P-201ENST00000364497 107 ntBASIC1.29□□□□□ -2.2
CTSFQ9UBX1 RNU6-1317P-201ENST00000364582 104 ntBASIC1.29□□□□□ -2.2
CTSFQ9UBX1 RNU6-1329P-201ENST00000365664 107 ntBASIC1.29□□□□□ -2.2
CTSFQ9UBX1 RNU6-259P-201ENST00000383999 107 ntBASIC1.29□□□□□ -2.2
CTSFQ9UBX1 SNORA32.2-201ENST00000384049 122 ntBASIC1.29□□□□□ -2.2
CTSFQ9UBX1 MIR514A2-201ENST00000385131 88 ntBASIC1.29□□□□□ -2.2
CTSFQ9UBX1 MIR514A3-201ENST00000385132 88 ntBASIC1.29□□□□□ -2.2
CTSFQ9UBX1 MIR208B-201ENST00000401172 77 ntBASIC1.29□□□□□ -2.2
CTSFQ9UBX1 AC012306.1-201ENST00000423267 114 ntBASIC1.29□□□□□ -2.2
CTSFQ9UBX1 TIMM9P3-201ENST00000428659 274 ntBASIC1.29□□□□□ -2.2
CTSFQ9UBX1 AC099677.2-201ENST00000436385 175 ntBASIC1.29□□□□□ -2.2
CTSFQ9UBX1 AC092473.1-201ENST00000441098 221 ntBASIC1.29□□□□□ -2.2
CTSFQ9UBX1 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.29□□□□□ -2.2
CTSFQ9UBX1 RNU7-14P-201ENST00000459331 62 ntBASIC1.29□□□□□ -2.2
CTSFQ9UBX1 AC087477.1-201ENST00000465747 340 ntBASIC1.29□□□□□ -2.2
CTSFQ9UBX1 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.29□□□□□ -2.2
CTSFQ9UBX1 HMGN1P13-201ENST00000505795 138 ntBASIC1.29□□□□□ -2.2
CTSFQ9UBX1 AC079140.5-201ENST00000507882 310 ntBASIC1.29□□□□□ -2.2
CTSFQ9UBX1 AC092436.3-201ENST00000511788 257 ntBASIC1.29□□□□□ -2.2
CTSFQ9UBX1 TRMT112P2-201ENST00000512910 132 ntBASIC1.29□□□□□ -2.2
CTSFQ9UBX1 AC025465.4-201ENST00000513422 638 ntBASIC1.29□□□□□ -2.2
CTSFQ9UBX1 Y_RNA.676-201ENST00000516393 96 ntBASIC1.29□□□□□ -2.2
CTSFQ9UBX1 MRPS36P4-201ENST00000534436 298 ntBASIC1.29□□□□□ -2.2
CTSFQ9UBX1 AP003034.1-201ENST00000534621 422 ntBASIC1.29□□□□□ -2.2
CTSFQ9UBX1 MIR4781-201ENST00000585250 76 ntBASIC1.29□□□□□ -2.2
CTSFQ9UBX1 AC005786.1-201ENST00000588553 154 ntBASIC1.29□□□□□ -2.2
CTSFQ9UBX1 FAM157A-202ENST00000615155 405 ntBASIC1.29□□□□□ -2.2
CTSFQ9UBX1 AL158209.2-201ENST00000619266 216 ntBASIC1.29□□□□□ -2.2
CTSFQ9UBX1 AC068205.3-201ENST00000636385 468 ntBASIC1.29□□□□□ -2.2
CTSFQ9UBX1 AC245060.5-201ENST00000610778 3293 ntBASIC1.29□□□□□ -2.2
CTSFQ9UBX1 AC009541.1-201ENST00000438279 2662 ntBASIC1.29□□□□□ -2.2
CTSFQ9UBX1 RNU1-76P-201ENST00000362903 159 ntBASIC1.28□□□□□ -2.2
CTSFQ9UBX1 RNU6-82P-201ENST00000363970 107 ntBASIC1.28□□□□□ -2.2
CTSFQ9UBX1 Y_RNA.327-201ENST00000365201 102 ntBASIC1.28□□□□□ -2.2
CTSFQ9UBX1 SNORD116-2-201ENST00000384274 95 ntBASIC1.28□□□□□ -2.2
CTSFQ9UBX1 SNORD116-6-201ENST00000384711 96 ntBASIC1.28□□□□□ -2.2
CTSFQ9UBX1 SNORD37.1-201ENST00000390968 65 ntBASIC1.28□□□□□ -2.2
CTSFQ9UBX1 MIR1267-201ENST00000408723 78 ntBASIC1.28□□□□□ -2.2
CTSFQ9UBX1 RNU6-1068P-201ENST00000410958 103 ntBASIC1.28□□□□□ -2.2
CTSFQ9UBX1 AC007098.1-201ENST00000420122 367 ntBASIC1.28□□□□□ -2.2
CTSFQ9UBX1 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.28□□□□□ -2.2
CTSFQ9UBX1 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC1.28□□□□□ -2.2
CTSFQ9UBX1 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.28□□□□□ -2.2
CTSFQ9UBX1 MTND1P29-201ENST00000448112 647 ntBASIC1.28□□□□□ -2.2
CTSFQ9UBX1 RNU1-131P-201ENST00000458943 161 ntBASIC1.28□□□□□ -2.2
CTSFQ9UBX1 AC010531.2-201ENST00000465012 153 ntBASIC1.28□□□□□ -2.2
CTSFQ9UBX1 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC1.28□□□□□ -2.2
CTSFQ9UBX1 MTCYBP18-201ENST00000501056 747 ntBASIC1.28□□□□□ -2.2
CTSFQ9UBX1 AC097473.1-201ENST00000508142 408 ntBASIC1.28□□□□□ -2.2
CTSFQ9UBX1 SNORD60.2-201ENST00000516883 86 ntBASIC1.28□□□□□ -2.2
CTSFQ9UBX1 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.28□□□□□ -2.2
CTSFQ9UBX1 AC008269.2-201ENST00000561915 1105 ntBASIC1.28□□□□□ -2.2
CTSFQ9UBX1 AC090517.1-201ENST00000569307 266 ntBASIC1.28□□□□□ -2.2
CTSFQ9UBX1 CTHRC1P1-201ENST00000605383 469 ntBASIC1.28□□□□□ -2.2
CTSFQ9UBX1 AL357078.3-201ENST00000607528 618 ntBASIC1.28□□□□□ -2.2
CTSFQ9UBX1 AC092954.2-201ENST00000609103 430 ntBASIC1.28□□□□□ -2.2
CTSFQ9UBX1 RMST_3.1-201ENST00000611651 109 ntBASIC1.28□□□□□ -2.2
CTSFQ9UBX1 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.28□□□□□ -2.2
CTSFQ9UBX1 AL121890.5-201ENST00000620848 304 ntBASIC1.28□□□□□ -2.2
CTSFQ9UBX1 AC124864.2-201ENST00000624736 186 ntBASIC1.28□□□□□ -2.2
CTSFQ9UBX1 MTND5P9-201ENST00000503854 1755 ntBASIC1.28□□□□□ -2.2
CTSFQ9UBX1 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.28□□□□□ -2.2
CTSFQ9UBX1 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
CTSFQ9UBX1 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
CTSFQ9UBX1 RNU6-1322P-201ENST00000364309 107 ntBASIC1.27□□□□□ -2.21
CTSFQ9UBX1 RNU4-56P-201ENST00000364700 142 ntBASIC1.27□□□□□ -2.21
CTSFQ9UBX1 SNORA18.2-201ENST00000383865 132 ntBASIC1.27□□□□□ -2.21
CTSFQ9UBX1 SNORA29-201ENST00000384183 140 ntBASIC1.27□□□□□ -2.21
CTSFQ9UBX1 MTCO3P40-201ENST00000392516 676 ntBASIC1.27□□□□□ -2.21
CTSFQ9UBX1 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.27□□□□□ -2.21
CTSFQ9UBX1 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.27□□□□□ -2.21
CTSFQ9UBX1 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.27□□□□□ -2.21
CTSFQ9UBX1 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.27□□□□□ -2.21
CTSFQ9UBX1 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.27□□□□□ -2.21
CTSFQ9UBX1 AC016925.1-201ENST00000458303 298 ntBASIC1.27□□□□□ -2.21
CTSFQ9UBX1 RNU6-1037P-201ENST00000459571 107 ntBASIC1.27□□□□□ -2.21
CTSFQ9UBX1 RNU6-1208P-201ENST00000459588 107 ntBASIC1.27□□□□□ -2.21
CTSFQ9UBX1 AC004223.1-201ENST00000479840 271 ntBASIC1.27□□□□□ -2.21
CTSFQ9UBX1 AC083904.1-201ENST00000487828 231 ntBASIC1.27□□□□□ -2.21
CTSFQ9UBX1 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC1.27□□□□□ -2.21
CTSFQ9UBX1 AC091435.1-201ENST00000505442 584 ntBASIC1.27□□□□□ -2.21
CTSFQ9UBX1 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.27□□□□□ -2.21
CTSFQ9UBX1 MTND2P38-201ENST00000522536 667 ntBASIC1.27□□□□□ -2.21
CTSFQ9UBX1 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.27□□□□□ -2.21
CTSFQ9UBX1 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.27□□□□□ -2.21
CTSFQ9UBX1 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.27□□□□□ -2.21
CTSFQ9UBX1 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms