Protein–RNA interactions for Protein: Q9P031

CCDC59, Thyroid transcription factor 1-associated protein 26, humanhuman

Known RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59Q9P031 RNU6-1329P-201ENST00000365664 107 ntBASIC1.08□□□□□ -2.24
CCDC59Q9P031 RNU6-1286P-201ENST00000383871 107 ntBASIC1.08□□□□□ -2.24
CCDC59Q9P031 SNORA22-201ENST00000383907 134 ntBASIC1.08□□□□□ -2.24
CCDC59Q9P031 SNORA22C-201ENST00000384614 134 ntBASIC1.08□□□□□ -2.24
CCDC59Q9P031 MIR618-201ENST00000385287 98 ntBASIC1.08□□□□□ -2.24
CCDC59Q9P031 SNORD37.1-201ENST00000390968 65 ntBASIC1.08□□□□□ -2.24
CCDC59Q9P031 AC004866.1-201ENST00000411748 78 ntBASIC1.08□□□□□ -2.24
CCDC59Q9P031 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC1.08□□□□□ -2.24
CCDC59Q9P031 AC004965.1-201ENST00000413033 213 ntBASIC1.08□□□□□ -2.24
CCDC59Q9P031 MRPL35P3-201ENST00000421557 364 ntBASIC1.08□□□□□ -2.24
CCDC59Q9P031 AL591704.2-201ENST00000421658 181 ntBASIC1.08□□□□□ -2.24
CCDC59Q9P031 AC092447.3-201ENST00000426027 686 ntBASIC1.08□□□□□ -2.24
CCDC59Q9P031 HMGN2P34-201ENST00000437647 269 ntBASIC1.08□□□□□ -2.24
CCDC59Q9P031 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC1.08□□□□□ -2.24
CCDC59Q9P031 AC009237.7-201ENST00000447357 229 ntBASIC1.08□□□□□ -2.24
CCDC59Q9P031 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC1.08□□□□□ -2.24
CCDC59Q9P031 MTCO3P8-201ENST00000453691 755 ntBASIC1.08□□□□□ -2.24
CCDC59Q9P031 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.08□□□□□ -2.24
CCDC59Q9P031 AC114982.1-201ENST00000469402 321 ntBASIC1.08□□□□□ -2.24
CCDC59Q9P031 RNU6-1069P-201ENST00000516612 133 ntBASIC1.08□□□□□ -2.24
CCDC59Q9P031 RNU6-295P-201ENST00000516901 104 ntBASIC1.08□□□□□ -2.24
CCDC59Q9P031 CYP3A52P-201ENST00000563326 91 ntBASIC1.08□□□□□ -2.24
CCDC59Q9P031 MIR4709-201ENST00000577272 72 ntBASIC1.08□□□□□ -2.24
CCDC59Q9P031 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.08□□□□□ -2.24
CCDC59Q9P031 AL357078.3-201ENST00000607528 618 ntBASIC1.08□□□□□ -2.24
CCDC59Q9P031 AL365434.2-201ENST00000607979 234 ntBASIC1.08□□□□□ -2.24
CCDC59Q9P031 RMST_3.1-201ENST00000611651 109 ntBASIC1.08□□□□□ -2.24
CCDC59Q9P031 FER-210ENST00000628534 558 ntTSL 5 BASIC1.08□□□□□ -2.24
CCDC59Q9P031 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.07□□□□□ -2.24
CCDC59Q9P031 Y_RNA.1-201ENST00000352915 104 ntBASIC1.07□□□□□ -2.24
CCDC59Q9P031 RNU6-82P-201ENST00000363970 107 ntBASIC1.07□□□□□ -2.24
CCDC59Q9P031 RNU6-60P-201ENST00000364792 103 ntBASIC1.07□□□□□ -2.24
CCDC59Q9P031 RNU6-968P-201ENST00000384076 107 ntBASIC1.07□□□□□ -2.24
CCDC59Q9P031 AL663109.1-201ENST00000411498 844 ntBASIC1.07□□□□□ -2.24
CCDC59Q9P031 RPS29P28-201ENST00000446439 141 ntBASIC1.07□□□□□ -2.24
CCDC59Q9P031 RNU6-956P-201ENST00000458868 103 ntBASIC1.07□□□□□ -2.24
CCDC59Q9P031 RPS3AP17-201ENST00000472594 777 ntBASIC1.07□□□□□ -2.24
CCDC59Q9P031 TRBV12-1-201ENST00000479785 344 ntBASIC1.07□□□□□ -2.24
CCDC59Q9P031 AC004223.1-201ENST00000479840 271 ntBASIC1.07□□□□□ -2.24
CCDC59Q9P031 SNORA40.12-201ENST00000516329 111 ntBASIC1.07□□□□□ -2.24
CCDC59Q9P031 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.07□□□□□ -2.24
CCDC59Q9P031 RAB11AP2-201ENST00000545905 639 ntBASIC1.07□□□□□ -2.24
CCDC59Q9P031 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.07□□□□□ -2.24
CCDC59Q9P031 SCOCP1-201ENST00000554676 349 ntBASIC1.07□□□□□ -2.24
CCDC59Q9P031 AL118558.2-201ENST00000556294 238 ntBASIC1.07□□□□□ -2.24
CCDC59Q9P031 MIR3683-201ENST00000580847 82 ntBASIC1.07□□□□□ -2.24
CCDC59Q9P031 Z99497.2-201ENST00000603634 310 ntBASIC1.07□□□□□ -2.24
CCDC59Q9P031 AC006001.4-201ENST00000622243 395 ntBASIC1.07□□□□□ -2.24
CCDC59Q9P031 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
CCDC59Q9P031 RNA5SP327-201ENST00000362494 101 ntBASIC1.06□□□□□ -2.24
CCDC59Q9P031 RNU6-534P-201ENST00000364877 106 ntBASIC1.06□□□□□ -2.24
CCDC59Q9P031 Y_RNA.296-201ENST00000364930 108 ntBASIC1.06□□□□□ -2.24
CCDC59Q9P031 MIR513A1-201ENST00000385138 129 ntBASIC1.06□□□□□ -2.24
CCDC59Q9P031 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC1.06□□□□□ -2.24
CCDC59Q9P031 SNX2P2-201ENST00000424553 323 ntBASIC1.06□□□□□ -2.24
CCDC59Q9P031 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.06□□□□□ -2.24
CCDC59Q9P031 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.06□□□□□ -2.24
CCDC59Q9P031 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.06□□□□□ -2.24
CCDC59Q9P031 RNU7-34P-201ENST00000459394 64 ntBASIC1.06□□□□□ -2.24
CCDC59Q9P031 RPS26P45-201ENST00000471748 340 ntBASIC1.06□□□□□ -2.24
CCDC59Q9P031 BET1P1-201ENST00000482276 359 ntBASIC1.06□□□□□ -2.24
CCDC59Q9P031 HMGB1P29-201ENST00000505659 499 ntBASIC1.06□□□□□ -2.24
CCDC59Q9P031 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.06□□□□□ -2.24
CCDC59Q9P031 RNA5SP401-201ENST00000515920 127 ntBASIC1.06□□□□□ -2.24
CCDC59Q9P031 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.06□□□□□ -2.24
CCDC59Q9P031 AL442163.3-201ENST00000554110 156 ntBASIC1.06□□□□□ -2.24
CCDC59Q9P031 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.06□□□□□ -2.24
CCDC59Q9P031 MIR5692C1-201ENST00000585309 91 ntBASIC1.06□□□□□ -2.24
CCDC59Q9P031 AC121247.2-201ENST00000604776 136 ntBASIC1.06□□□□□ -2.24
CCDC59Q9P031 AL121757.2-201ENST00000611223 313 ntBASIC1.06□□□□□ -2.24
CCDC59Q9P031 MIR6852-201ENST00000621699 66 ntBASIC1.06□□□□□ -2.24
CCDC59Q9P031 RNU6-1305P-201ENST00000364353 104 ntBASIC1.05□□□□□ -2.24
CCDC59Q9P031 RNU4-66P-201ENST00000365199 138 ntBASIC1.05□□□□□ -2.24
CCDC59Q9P031 Y_RNA.378-201ENST00000365652 113 ntBASIC1.05□□□□□ -2.24
CCDC59Q9P031 SNORA70B-201ENST00000384210 135 ntBASIC1.05□□□□□ -2.24
CCDC59Q9P031 RNU6-417P-201ENST00000384712 107 ntBASIC1.05□□□□□ -2.24
CCDC59Q9P031 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
CCDC59Q9P031 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.05□□□□□ -2.24
CCDC59Q9P031 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.05□□□□□ -2.24
CCDC59Q9P031 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.05□□□□□ -2.24
CCDC59Q9P031 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.05□□□□□ -2.24
CCDC59Q9P031 UBE2DNL-203ENST00000474922 222 ntBASIC1.05□□□□□ -2.24
CCDC59Q9P031 AF186996.7-201ENST00000492781 209 ntBASIC1.05□□□□□ -2.24
CCDC59Q9P031 HMGN1P12-201ENST00000499125 195 ntBASIC1.05□□□□□ -2.24
CCDC59Q9P031 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.05□□□□□ -2.24
CCDC59Q9P031 RNU6-1146P-201ENST00000516282 102 ntBASIC1.05□□□□□ -2.24
CCDC59Q9P031 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.05□□□□□ -2.24
CCDC59Q9P031 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
CCDC59Q9P031 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.05□□□□□ -2.24
CCDC59Q9P031 AL512310.8-201ENST00000550183 120 ntBASIC1.05□□□□□ -2.24
CCDC59Q9P031 AL157687.1-201ENST00000554853 619 ntBASIC1.05□□□□□ -2.24
CCDC59Q9P031 MIR4742-201ENST00000581069 85 ntBASIC1.05□□□□□ -2.24
CCDC59Q9P031 FGF7P1-201ENST00000582820 288 ntBASIC1.05□□□□□ -2.24
CCDC59Q9P031 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.05□□□□□ -2.24
CCDC59Q9P031 AC040896.1-201ENST00000613819 479 ntBASIC1.05□□□□□ -2.24
CCDC59Q9P031 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.05□□□□□ -2.24
CCDC59Q9P031 AC009509.4-201ENST00000619202 509 ntBASIC1.05□□□□□ -2.24
CCDC59Q9P031 AC139792.3-201ENST00000623525 224 ntBASIC1.05□□□□□ -2.24
CCDC59Q9P031 AC009033.1-201ENST00000624279 431 ntBASIC1.05□□□□□ -2.24
CCDC59Q9P031 OR5AK4P-201ENST00000635912 903 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 127.1 ms