Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 RNU6-1274P-201ENST00000384557 107 ntBASIC2.01□□□□□ -2.09
NDE1Q9NXR1 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
NDE1Q9NXR1 SNORA12-201ENST00000391162 147 ntBASIC2.01□□□□□ -2.09
NDE1Q9NXR1 SNORA75.6-201ENST00000391318 127 ntBASIC2.01□□□□□ -2.09
NDE1Q9NXR1 CBX3P9-201ENST00000402326 552 ntBASIC2.01□□□□□ -2.09
NDE1Q9NXR1 RNA5SP494-201ENST00000410653 129 ntBASIC2.01□□□□□ -2.09
NDE1Q9NXR1 EIF1AXP1-201ENST00000419267 435 ntBASIC2.01□□□□□ -2.09
NDE1Q9NXR1 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.01□□□□□ -2.09
NDE1Q9NXR1 TOMM22P6-201ENST00000465035 409 ntBASIC2.01□□□□□ -2.09
NDE1Q9NXR1 AC087477.1-201ENST00000465747 340 ntBASIC2.01□□□□□ -2.09
NDE1Q9NXR1 AC027575.1-201ENST00000481064 460 ntBASIC2.01□□□□□ -2.09
NDE1Q9NXR1 RPL30P10-201ENST00000488148 337 ntBASIC2.01□□□□□ -2.09
NDE1Q9NXR1 AC145146.1-201ENST00000496370 254 ntBASIC2.01□□□□□ -2.09
NDE1Q9NXR1 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.01□□□□□ -2.09
NDE1Q9NXR1 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC2.01□□□□□ -2.09
NDE1Q9NXR1 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.01□□□□□ -2.09
NDE1Q9NXR1 RNU6-1153P-201ENST00000516760 105 ntBASIC2.01□□□□□ -2.09
NDE1Q9NXR1 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.01□□□□□ -2.09
NDE1Q9NXR1 AC021231.3-201ENST00000558497 370 ntBASIC2.01□□□□□ -2.09
NDE1Q9NXR1 AC027176.1-201ENST00000560204 514 ntBASIC2.01□□□□□ -2.09
NDE1Q9NXR1 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.01□□□□□ -2.09
NDE1Q9NXR1 AC090574.1-201ENST00000623186 233 ntBASIC2.01□□□□□ -2.09
NDE1Q9NXR1 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.01□□□□□ -2.09
NDE1Q9NXR1 AC009487.4-201ENST00000624969 3585 ntBASIC2.01□□□□□ -2.09
NDE1Q9NXR1 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.01□□□□□ -2.09
NDE1Q9NXR1 AC073544.1-201ENST00000600110 1595 ntBASIC2.01□□□□□ -2.09
NDE1Q9NXR1 AP000560.1-201ENST00000624150 1937 ntBASIC2.01□□□□□ -2.09
NDE1Q9NXR1 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2□□□□□ -2.09
NDE1Q9NXR1 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2□□□□□ -2.09
NDE1Q9NXR1 AC062016.1-201ENST00000355719 319 ntBASIC2□□□□□ -2.09
NDE1Q9NXR1 MIR369-201ENST00000362155 70 ntBASIC2□□□□□ -2.09
NDE1Q9NXR1 RNY1P16-201ENST00000363063 111 ntBASIC2□□□□□ -2.09
NDE1Q9NXR1 RNU6-595P-201ENST00000363944 107 ntBASIC2□□□□□ -2.09
NDE1Q9NXR1 RNU6-99P-201ENST00000364721 107 ntBASIC2□□□□□ -2.09
NDE1Q9NXR1 RNA5SP125-201ENST00000364843 120 ntBASIC2□□□□□ -2.09
NDE1Q9NXR1 U6atac.2-201ENST00000408644 118 ntBASIC2□□□□□ -2.09
NDE1Q9NXR1 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2□□□□□ -2.09
NDE1Q9NXR1 AL445305.1-201ENST00000432577 575 ntBASIC2□□□□□ -2.09
NDE1Q9NXR1 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2□□□□□ -2.09
NDE1Q9NXR1 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2□□□□□ -2.09
NDE1Q9NXR1 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2□□□□□ -2.09
NDE1Q9NXR1 RPS3P1-201ENST00000456781 192 ntBASIC2□□□□□ -2.09
NDE1Q9NXR1 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2□□□□□ -2.09
NDE1Q9NXR1 HMGN1P13-201ENST00000505795 138 ntBASIC2□□□□□ -2.09
NDE1Q9NXR1 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2□□□□□ -2.09
NDE1Q9NXR1 RNA5SP148-201ENST00000516527 94 ntBASIC2□□□□□ -2.09
NDE1Q9NXR1 CBX3P7-201ENST00000532876 502 ntBASIC2□□□□□ -2.09
NDE1Q9NXR1 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2□□□□□ -2.09
NDE1Q9NXR1 MIR1244-1-201ENST00000612829 85 ntBASIC2□□□□□ -2.09
NDE1Q9NXR1 CTSLP2-204ENST00000629029 392 ntBASIC2□□□□□ -2.09
NDE1Q9NXR1 MIR1244-3-201ENST00000635744 85 ntBASIC2□□□□□ -2.09
NDE1Q9NXR1 MIR1244-2-201ENST00000636449 85 ntBASIC2□□□□□ -2.09
NDE1Q9NXR1 MIR1244-4-202ENST00000636813 85 ntBASIC2□□□□□ -2.09
NDE1Q9NXR1 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2□□□□□ -2.09
NDE1Q9NXR1 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2□□□□□ -2.09
NDE1Q9NXR1 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2□□□□□ -2.09
NDE1Q9NXR1 Y_RNA.146-201ENST00000363549 102 ntBASIC1.99□□□□□ -2.09
NDE1Q9NXR1 RNU6-944P-201ENST00000364023 107 ntBASIC1.99□□□□□ -2.09
NDE1Q9NXR1 RNU6-694P-201ENST00000364071 147 ntBASIC1.99□□□□□ -2.09
NDE1Q9NXR1 Y_RNA.405-201ENST00000383979 100 ntBASIC1.99□□□□□ -2.09
NDE1Q9NXR1 Y_RNA.451-201ENST00000384200 100 ntBASIC1.99□□□□□ -2.09
NDE1Q9NXR1 RNU6-378P-201ENST00000384324 107 ntBASIC1.99□□□□□ -2.09
NDE1Q9NXR1 Y_RNA.524-201ENST00000384564 100 ntBASIC1.99□□□□□ -2.09
NDE1Q9NXR1 Y_RNA.561-201ENST00000384694 100 ntBASIC1.99□□□□□ -2.09
NDE1Q9NXR1 MIR32-201ENST00000384965 70 ntBASIC1.99□□□□□ -2.09
NDE1Q9NXR1 MIR559-201ENST00000385188 96 ntBASIC1.99□□□□□ -2.09
NDE1Q9NXR1 MIR208B-201ENST00000401172 77 ntBASIC1.99□□□□□ -2.09
NDE1Q9NXR1 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.99□□□□□ -2.09
NDE1Q9NXR1 AC012306.1-201ENST00000423267 114 ntBASIC1.99□□□□□ -2.09
NDE1Q9NXR1 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.99□□□□□ -2.09
NDE1Q9NXR1 AL109933.2-201ENST00000452651 260 ntBASIC1.99□□□□□ -2.09
NDE1Q9NXR1 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.99□□□□□ -2.09
NDE1Q9NXR1 RNU7-152P-201ENST00000458982 64 ntBASIC1.99□□□□□ -2.09
NDE1Q9NXR1 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.99□□□□□ -2.09
NDE1Q9NXR1 YWHAEP4-201ENST00000505390 198 ntBASIC1.99□□□□□ -2.09
NDE1Q9NXR1 AC105758.1-201ENST00000506038 399 ntBASIC1.99□□□□□ -2.09
NDE1Q9NXR1 RNU6-470P-201ENST00000515954 104 ntBASIC1.99□□□□□ -2.09
NDE1Q9NXR1 MIR3136-201ENST00000583498 78 ntBASIC1.99□□□□□ -2.09
NDE1Q9NXR1 AC133104.2-201ENST00000615272 193 ntBASIC1.99□□□□□ -2.09
NDE1Q9NXR1 AL160413.1-201ENST00000622780 310 ntBASIC1.99□□□□□ -2.09
NDE1Q9NXR1 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.99□□□□□ -2.09
NDE1Q9NXR1 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.99□□□□□ -2.09
NDE1Q9NXR1 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.99□□□□□ -2.09
NDE1Q9NXR1 RNU6-874P-201ENST00000362390 105 ntBASIC1.98□□□□□ -2.09
NDE1Q9NXR1 Y_RNA.138-201ENST00000363462 102 ntBASIC1.98□□□□□ -2.09
NDE1Q9NXR1 Y_RNA.187-201ENST00000363918 113 ntBASIC1.98□□□□□ -2.09
NDE1Q9NXR1 RNU6-1040P-201ENST00000383974 107 ntBASIC1.98□□□□□ -2.09
NDE1Q9NXR1 Y_RNA.460-201ENST00000384255 102 ntBASIC1.98□□□□□ -2.09
NDE1Q9NXR1 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
NDE1Q9NXR1 MRPS18CP6-201ENST00000423587 223 ntBASIC1.98□□□□□ -2.09
NDE1Q9NXR1 AC068781.1-201ENST00000488231 618 ntBASIC1.98□□□□□ -2.09
NDE1Q9NXR1 MIR449C-201ENST00000516047 92 ntBASIC1.98□□□□□ -2.09
NDE1Q9NXR1 AL590705.4-201ENST00000532209 134 ntBASIC1.98□□□□□ -2.09
NDE1Q9NXR1 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.98□□□□□ -2.09
NDE1Q9NXR1 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.98□□□□□ -2.09
NDE1Q9NXR1 AL138963.2-201ENST00000605137 226 ntBASIC1.98□□□□□ -2.09
NDE1Q9NXR1 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.98□□□□□ -2.09
NDE1Q9NXR1 SCARNA4-201ENST00000629045 128 ntBASIC1.98□□□□□ -2.09
NDE1Q9NXR1 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.98□□□□□ -2.09
NDE1Q9NXR1 MTND5P10-201ENST00000603719 1809 ntBASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms