Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 Z82205.1-201ENST00000428456 297 ntBASIC2.17□□□□□ -2.06
BLOC1S4Q9NUP1 C8orf59P1-201ENST00000429930 303 ntBASIC2.17□□□□□ -2.06
BLOC1S4Q9NUP1 AC004386.2-201ENST00000441858 148 ntBASIC2.17□□□□□ -2.06
BLOC1S4Q9NUP1 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.17□□□□□ -2.06
BLOC1S4Q9NUP1 AC009237.7-201ENST00000447357 229 ntBASIC2.17□□□□□ -2.06
BLOC1S4Q9NUP1 YWHAEP4-201ENST00000505390 198 ntBASIC2.17□□□□□ -2.06
BLOC1S4Q9NUP1 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC2.17□□□□□ -2.06
BLOC1S4Q9NUP1 AC011352.1-201ENST00000512300 793 ntBASIC2.17□□□□□ -2.06
BLOC1S4Q9NUP1 RNU6-718P-201ENST00000516166 105 ntBASIC2.17□□□□□ -2.06
BLOC1S4Q9NUP1 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.17□□□□□ -2.06
BLOC1S4Q9NUP1 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.17□□□□□ -2.06
BLOC1S4Q9NUP1 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.17□□□□□ -2.06
BLOC1S4Q9NUP1 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.17□□□□□ -2.06
BLOC1S4Q9NUP1 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.17□□□□□ -2.06
BLOC1S4Q9NUP1 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.17□□□□□ -2.06
BLOC1S4Q9NUP1 BX322639.1-202ENST00000423987 2213 ntBASIC2.17□□□□□ -2.06
BLOC1S4Q9NUP1 AC027514.1-201ENST00000588561 1603 ntBASIC2.17□□□□□ -2.06
BLOC1S4Q9NUP1 RNU6-301P-201ENST00000384277 107 ntBASIC2.16□□□□□ -2.06
BLOC1S4Q9NUP1 SNORA51.11-201ENST00000384442 131 ntBASIC2.16□□□□□ -2.06
BLOC1S4Q9NUP1 MIR676-201ENST00000390702 67 ntBASIC2.16□□□□□ -2.06
BLOC1S4Q9NUP1 RNU6-510P-201ENST00000391239 108 ntBASIC2.16□□□□□ -2.06
BLOC1S4Q9NUP1 MIR1283-1-201ENST00000408494 87 ntBASIC2.16□□□□□ -2.06
BLOC1S4Q9NUP1 AC009310.1-201ENST00000414414 451 ntBASIC2.16□□□□□ -2.06
BLOC1S4Q9NUP1 NCOR1P3-201ENST00000420479 303 ntBASIC2.16□□□□□ -2.06
BLOC1S4Q9NUP1 AL358453.1-201ENST00000422522 250 ntBASIC2.16□□□□□ -2.06
BLOC1S4Q9NUP1 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.16□□□□□ -2.06
BLOC1S4Q9NUP1 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC2.16□□□□□ -2.06
BLOC1S4Q9NUP1 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.16□□□□□ -2.06
BLOC1S4Q9NUP1 AC079354.2-201ENST00000453523 154 ntBASIC2.16□□□□□ -2.06
BLOC1S4Q9NUP1 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.16□□□□□ -2.06
BLOC1S4Q9NUP1 RNU1-54P-201ENST00000517181 120 ntBASIC2.16□□□□□ -2.06
BLOC1S4Q9NUP1 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.16□□□□□ -2.06
BLOC1S4Q9NUP1 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.16□□□□□ -2.06
BLOC1S4Q9NUP1 MIR3942-201ENST00000585264 109 ntBASIC2.16□□□□□ -2.06
BLOC1S4Q9NUP1 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.16□□□□□ -2.06
BLOC1S4Q9NUP1 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.16□□□□□ -2.06
BLOC1S4Q9NUP1 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.16□□□□□ -2.06
BLOC1S4Q9NUP1 MTND5P9-201ENST00000503854 1755 ntBASIC2.15□□□□□ -2.06
BLOC1S4Q9NUP1 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.06
BLOC1S4Q9NUP1 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.06
BLOC1S4Q9NUP1 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.15□□□□□ -2.07
BLOC1S4Q9NUP1 MTCO1P44-201ENST00000441935 243 ntBASIC2.15□□□□□ -2.07
BLOC1S4Q9NUP1 AC067942.3-201ENST00000512025 362 ntBASIC2.15□□□□□ -2.07
BLOC1S4Q9NUP1 AC018638.8-201ENST00000588755 281 ntBASIC2.15□□□□□ -2.07
BLOC1S4Q9NUP1 AC080078.2-201ENST00000603766 501 ntBASIC2.15□□□□□ -2.07
BLOC1S4Q9NUP1 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.15□□□□□ -2.07
BLOC1S4Q9NUP1 AC116312.1-201ENST00000606841 314 ntBASIC2.15□□□□□ -2.07
BLOC1S4Q9NUP1 AC013412.1-201ENST00000610687 192 ntBASIC2.15□□□□□ -2.07
BLOC1S4Q9NUP1 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
BLOC1S4Q9NUP1 RNU6-137P-201ENST00000363680 108 ntBASIC2.14□□□□□ -2.07
BLOC1S4Q9NUP1 RNU5F-3P-201ENST00000363767 117 ntBASIC2.14□□□□□ -2.07
BLOC1S4Q9NUP1 SNORD115-8-201ENST00000363856 82 ntBASIC2.14□□□□□ -2.07
BLOC1S4Q9NUP1 SNORD115-38-201ENST00000365037 82 ntBASIC2.14□□□□□ -2.07
BLOC1S4Q9NUP1 RNU6-596P-201ENST00000365395 98 ntBASIC2.14□□□□□ -2.07
BLOC1S4Q9NUP1 RNU6-245P-201ENST00000384020 107 ntBASIC2.14□□□□□ -2.07
BLOC1S4Q9NUP1 RNU6-831P-201ENST00000384548 107 ntBASIC2.14□□□□□ -2.07
BLOC1S4Q9NUP1 MIR153-2-201ENST00000385225 87 ntBASIC2.14□□□□□ -2.07
BLOC1S4Q9NUP1 SNORA12.2-201ENST00000391040 156 ntBASIC2.14□□□□□ -2.07
BLOC1S4Q9NUP1 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC2.14□□□□□ -2.07
BLOC1S4Q9NUP1 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.14□□□□□ -2.07
BLOC1S4Q9NUP1 RNU2-20P-201ENST00000410425 191 ntBASIC2.14□□□□□ -2.07
BLOC1S4Q9NUP1 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.14□□□□□ -2.07
BLOC1S4Q9NUP1 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.14□□□□□ -2.07
BLOC1S4Q9NUP1 RPL23AP42-201ENST00000471152 471 ntBASIC2.14□□□□□ -2.07
BLOC1S4Q9NUP1 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC2.14□□□□□ -2.07
BLOC1S4Q9NUP1 RNA5SP454-201ENST00000517231 127 ntBASIC2.14□□□□□ -2.07
BLOC1S4Q9NUP1 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.14□□□□□ -2.07
BLOC1S4Q9NUP1 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC2.14□□□□□ -2.07
BLOC1S4Q9NUP1 AC022254.1-201ENST00000567857 235 ntBASIC2.14□□□□□ -2.07
BLOC1S4Q9NUP1 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC2.14□□□□□ -2.07
BLOC1S4Q9NUP1 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.14□□□□□ -2.07
BLOC1S4Q9NUP1 AL159152.1-201ENST00000635019 2587 ntBASIC2.14□□□□□ -2.07
BLOC1S4Q9NUP1 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
BLOC1S4Q9NUP1 AC245060.5-201ENST00000610778 3293 ntBASIC2.14□□□□□ -2.07
BLOC1S4Q9NUP1 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
BLOC1S4Q9NUP1 MIR340-201ENST00000362125 95 ntBASIC2.13□□□□□ -2.07
BLOC1S4Q9NUP1 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.13□□□□□ -2.07
BLOC1S4Q9NUP1 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.13□□□□□ -2.07
BLOC1S4Q9NUP1 AC010531.2-201ENST00000465012 153 ntBASIC2.13□□□□□ -2.07
BLOC1S4Q9NUP1 RNU6-948P-201ENST00000516374 107 ntBASIC2.13□□□□□ -2.07
BLOC1S4Q9NUP1 RNU6-566P-201ENST00000516790 107 ntBASIC2.13□□□□□ -2.07
BLOC1S4Q9NUP1 SNORA44.1-201ENST00000517031 108 ntBASIC2.13□□□□□ -2.07
BLOC1S4Q9NUP1 DEFB131C-201ENST00000528817 165 ntBASIC2.13□□□□□ -2.07
BLOC1S4Q9NUP1 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.13□□□□□ -2.07
BLOC1S4Q9NUP1 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.13□□□□□ -2.07
BLOC1S4Q9NUP1 SNORA59B-202ENST00000578183 701 ntBASIC2.13□□□□□ -2.07
BLOC1S4Q9NUP1 AC007014.2-201ENST00000615581 479 ntBASIC2.13□□□□□ -2.07
BLOC1S4Q9NUP1 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.13□□□□□ -2.07
BLOC1S4Q9NUP1 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.13□□□□□ -2.07
BLOC1S4Q9NUP1 RNU6-545P-201ENST00000362681 104 ntBASIC2.12□□□□□ -2.07
BLOC1S4Q9NUP1 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
BLOC1S4Q9NUP1 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC2.12□□□□□ -2.07
BLOC1S4Q9NUP1 NFU1P2-201ENST00000448700 469 ntBASIC2.12□□□□□ -2.07
BLOC1S4Q9NUP1 ATP5J2P3-201ENST00000451550 258 ntBASIC2.12□□□□□ -2.07
BLOC1S4Q9NUP1 snoU13.30-201ENST00000458951 104 ntBASIC2.12□□□□□ -2.07
BLOC1S4Q9NUP1 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.12□□□□□ -2.07
BLOC1S4Q9NUP1 AC079804.2-201ENST00000490376 200 ntBASIC2.12□□□□□ -2.07
BLOC1S4Q9NUP1 AC097473.1-201ENST00000508142 408 ntBASIC2.12□□□□□ -2.07
BLOC1S4Q9NUP1 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC2.12□□□□□ -2.07
BLOC1S4Q9NUP1 RNU6-273P-201ENST00000516937 96 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms