Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC1.06□□□□□ -2.24
TREX1Q9NSU2 SNORA70.7-201ENST00000384159 133 ntBASIC1.06□□□□□ -2.24
TREX1Q9NSU2 RNU6-517P-201ENST00000384362 110 ntBASIC1.06□□□□□ -2.24
TREX1Q9NSU2 AL161935.2-201ENST00000414627 60 ntBASIC1.06□□□□□ -2.24
TREX1Q9NSU2 MTATP6P18-201ENST00000417994 673 ntBASIC1.06□□□□□ -2.24
TREX1Q9NSU2 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC1.06□□□□□ -2.24
TREX1Q9NSU2 MRPL35P3-201ENST00000421557 364 ntBASIC1.06□□□□□ -2.24
TREX1Q9NSU2 MTCYBP8-201ENST00000422855 651 ntBASIC1.06□□□□□ -2.24
TREX1Q9NSU2 RPS27P16-201ENST00000425758 201 ntBASIC1.06□□□□□ -2.24
TREX1Q9NSU2 MTCO2P11-201ENST00000431069 680 ntBASIC1.06□□□□□ -2.24
TREX1Q9NSU2 AL445567.1-201ENST00000439121 144 ntBASIC1.06□□□□□ -2.24
TREX1Q9NSU2 AC027119.1-201ENST00000440877 241 ntBASIC1.06□□□□□ -2.24
TREX1Q9NSU2 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.06□□□□□ -2.24
TREX1Q9NSU2 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC1.06□□□□□ -2.24
TREX1Q9NSU2 AC010486.2-201ENST00000505572 483 ntBASIC1.06□□□□□ -2.24
TREX1Q9NSU2 AC108078.1-201ENST00000508073 725 ntBASIC1.06□□□□□ -2.24
TREX1Q9NSU2 RNA5SP384-201ENST00000516615 116 ntBASIC1.06□□□□□ -2.24
TREX1Q9NSU2 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.06□□□□□ -2.24
TREX1Q9NSU2 AC090115.3-201ENST00000553218 849 ntBASIC1.06□□□□□ -2.24
TREX1Q9NSU2 HIF1AP1-201ENST00000553642 175 ntBASIC1.06□□□□□ -2.24
TREX1Q9NSU2 MIR4753-201ENST00000585119 83 ntBASIC1.06□□□□□ -2.24
TREX1Q9NSU2 AC068790.2-201ENST00000602601 557 ntBASIC1.06□□□□□ -2.24
TREX1Q9NSU2 SNORD114-21-201ENST00000606412 72 ntBASIC1.06□□□□□ -2.24
TREX1Q9NSU2 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.06□□□□□ -2.24
TREX1Q9NSU2 AC008147.4-201ENST00000617570 1204 ntBASIC1.06□□□□□ -2.24
TREX1Q9NSU2 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.06□□□□□ -2.24
TREX1Q9NSU2 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.06□□□□□ -2.24
TREX1Q9NSU2 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
TREX1Q9NSU2 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
TREX1Q9NSU2 Y_RNA.169-201ENST00000363745 96 ntBASIC1.05□□□□□ -2.24
TREX1Q9NSU2 RNU6-53P-201ENST00000365367 106 ntBASIC1.05□□□□□ -2.24
TREX1Q9NSU2 RNU6-1065P-201ENST00000384513 106 ntBASIC1.05□□□□□ -2.24
TREX1Q9NSU2 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC1.05□□□□□ -2.24
TREX1Q9NSU2 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.05□□□□□ -2.24
TREX1Q9NSU2 MTND4P32-201ENST00000437189 1237 ntBASIC1.05□□□□□ -2.24
TREX1Q9NSU2 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.05□□□□□ -2.24
TREX1Q9NSU2 MTCO2P3-201ENST00000442543 421 ntBASIC1.05□□□□□ -2.24
TREX1Q9NSU2 AC073910.1-201ENST00000445047 438 ntBASIC1.05□□□□□ -2.24
TREX1Q9NSU2 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.05□□□□□ -2.24
TREX1Q9NSU2 AL356010.1-201ENST00000456364 102 ntBASIC1.05□□□□□ -2.24
TREX1Q9NSU2 OR2A41P-201ENST00000473586 105 ntBASIC1.05□□□□□ -2.24
TREX1Q9NSU2 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC1.05□□□□□ -2.24
TREX1Q9NSU2 AC011406.1-201ENST00000512440 370 ntBASIC1.05□□□□□ -2.24
TREX1Q9NSU2 RNU6-323P-201ENST00000521915 107 ntBASIC1.05□□□□□ -2.24
TREX1Q9NSU2 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.05□□□□□ -2.24
TREX1Q9NSU2 AL391840.1-201ENST00000571144 367 ntBASIC1.05□□□□□ -2.24
TREX1Q9NSU2 MTATP6P24-201ENST00000576835 677 ntBASIC1.05□□□□□ -2.24
TREX1Q9NSU2 Z94722.1-201ENST00000604328 474 ntBASIC1.05□□□□□ -2.24
TREX1Q9NSU2 MIR6078-201ENST00000611069 100 ntBASIC1.05□□□□□ -2.24
TREX1Q9NSU2 MTND5P35-201ENST00000557537 1720 ntBASIC1.04□□□□□ -2.24
TREX1Q9NSU2 Y_RNA.116-201ENST00000363292 103 ntBASIC1.04□□□□□ -2.24
TREX1Q9NSU2 RNA5SP219-201ENST00000390940 113 ntBASIC1.04□□□□□ -2.24
TREX1Q9NSU2 MIR300-201ENST00000401138 83 ntBASIC1.04□□□□□ -2.24
TREX1Q9NSU2 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC1.04□□□□□ -2.24
TREX1Q9NSU2 COX6CP10-201ENST00000416832 224 ntBASIC1.04□□□□□ -2.24
TREX1Q9NSU2 AC060773.1-201ENST00000421698 310 ntBASIC1.04□□□□□ -2.24
TREX1Q9NSU2 AC069257.2-201ENST00000441819 155 ntBASIC1.04□□□□□ -2.24
TREX1Q9NSU2 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.04□□□□□ -2.24
TREX1Q9NSU2 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC1.04□□□□□ -2.24
TREX1Q9NSU2 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.04□□□□□ -2.24
TREX1Q9NSU2 OR2AQ1P-201ENST00000451972 200 ntBASIC1.04□□□□□ -2.24
TREX1Q9NSU2 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.04□□□□□ -2.24
TREX1Q9NSU2 RNU7-63P-201ENST00000459054 62 ntBASIC1.04□□□□□ -2.24
TREX1Q9NSU2 snoU13.27-201ENST00000459278 104 ntBASIC1.04□□□□□ -2.24
TREX1Q9NSU2 RNU7-138P-201ENST00000459479 64 ntBASIC1.04□□□□□ -2.24
TREX1Q9NSU2 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.04□□□□□ -2.24
TREX1Q9NSU2 RNU6-612P-201ENST00000516909 102 ntBASIC1.04□□□□□ -2.24
TREX1Q9NSU2 RNU6-856P-201ENST00000516959 98 ntBASIC1.04□□□□□ -2.24
TREX1Q9NSU2 RNU6-430P-201ENST00000517078 107 ntBASIC1.04□□□□□ -2.24
TREX1Q9NSU2 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC1.04□□□□□ -2.24
TREX1Q9NSU2 MTND4P7-201ENST00000523876 130 ntBASIC1.04□□□□□ -2.24
TREX1Q9NSU2 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC1.04□□□□□ -2.24
TREX1Q9NSU2 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.04□□□□□ -2.24
TREX1Q9NSU2 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.04□□□□□ -2.24
TREX1Q9NSU2 CTHRC1P1-201ENST00000605383 469 ntBASIC1.04□□□□□ -2.24
TREX1Q9NSU2 MIR6504-201ENST00000613520 61 ntBASIC1.04□□□□□ -2.24
TREX1Q9NSU2 uc_338.34-201ENST00000617467 174 ntBASIC1.04□□□□□ -2.24
TREX1Q9NSU2 RNU6-562P-201ENST00000362731 107 ntBASIC1.03□□□□□ -2.24
TREX1Q9NSU2 SNORA63D-201ENST00000364359 132 ntBASIC1.03□□□□□ -2.24
TREX1Q9NSU2 Y_RNA.508-201ENST00000384502 114 ntBASIC1.03□□□□□ -2.24
TREX1Q9NSU2 AL117342.1-201ENST00000404861 406 ntBASIC1.03□□□□□ -2.24
TREX1Q9NSU2 MIR1283-1-201ENST00000408494 87 ntBASIC1.03□□□□□ -2.24
TREX1Q9NSU2 SNRPEP10-201ENST00000420249 274 ntBASIC1.03□□□□□ -2.24
TREX1Q9NSU2 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC1.03□□□□□ -2.24
TREX1Q9NSU2 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.03□□□□□ -2.24
TREX1Q9NSU2 RNU6-1037P-201ENST00000459571 107 ntBASIC1.03□□□□□ -2.24
TREX1Q9NSU2 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.03□□□□□ -2.24
TREX1Q9NSU2 AC067942.3-201ENST00000512025 362 ntBASIC1.03□□□□□ -2.24
TREX1Q9NSU2 DEFB131C-201ENST00000528817 165 ntBASIC1.03□□□□□ -2.24
TREX1Q9NSU2 MIR5006-201ENST00000583027 110 ntBASIC1.03□□□□□ -2.24
TREX1Q9NSU2 AC004223.2-201ENST00000590309 544 ntBASIC1.03□□□□□ -2.24
TREX1Q9NSU2 NIFKP6-201ENST00000598115 845 ntBASIC1.03□□□□□ -2.24
TREX1Q9NSU2 AC104458.1-201ENST00000608243 463 ntBASIC1.03□□□□□ -2.24
TREX1Q9NSU2 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.03□□□□□ -2.24
TREX1Q9NSU2 AC121333.1-201ENST00000567488 2709 ntBASIC1.03□□□□□ -2.24
TREX1Q9NSU2 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.03□□□□□ -2.24
TREX1Q9NSU2 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.03□□□□□ -2.25
TREX1Q9NSU2 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
TREX1Q9NSU2 Y_RNA.269-201ENST00000364685 89 ntBASIC1.02□□□□□ -2.25
TREX1Q9NSU2 RNU6-996P-201ENST00000365438 107 ntBASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 139.5 ms