Protein–RNA interactions for Protein: Q9NSD5

SLC6A13, Sodium- and chloride-dependent GABA transporter 2, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13Q9NSD5 SNORD14A-201ENST00000606526 91 ntBASIC2.28□□□□□ -2.04
SLC6A13Q9NSD5 TCL6_2.1-201ENST00000615162 119 ntBASIC2.28□□□□□ -2.04
SLC6A13Q9NSD5 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.28□□□□□ -2.04
SLC6A13Q9NSD5 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
SLC6A13Q9NSD5 ZNF204P-201ENST00000416749 2397 ntBASIC2.27□□□□□ -2.05
SLC6A13Q9NSD5 MTND5P10-201ENST00000603719 1809 ntBASIC2.27□□□□□ -2.05
SLC6A13Q9NSD5 RNU6-743P-201ENST00000364151 106 ntBASIC2.27□□□□□ -2.05
SLC6A13Q9NSD5 RNA5SP126-201ENST00000365092 109 ntBASIC2.27□□□□□ -2.05
SLC6A13Q9NSD5 MIR144-201ENST00000384886 86 ntBASIC2.27□□□□□ -2.05
SLC6A13Q9NSD5 SRIP3-201ENST00000413200 219 ntBASIC2.27□□□□□ -2.05
SLC6A13Q9NSD5 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.27□□□□□ -2.05
SLC6A13Q9NSD5 AC007098.1-201ENST00000420122 367 ntBASIC2.27□□□□□ -2.05
SLC6A13Q9NSD5 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.27□□□□□ -2.05
SLC6A13Q9NSD5 AF228730.4-201ENST00000421457 183 ntBASIC2.27□□□□□ -2.05
SLC6A13Q9NSD5 MTND3P23-201ENST00000431980 347 ntBASIC2.27□□□□□ -2.05
SLC6A13Q9NSD5 RN7SL429P-201ENST00000479090 223 ntBASIC2.27□□□□□ -2.05
SLC6A13Q9NSD5 RN7SL489P-201ENST00000486185 223 ntBASIC2.27□□□□□ -2.05
SLC6A13Q9NSD5 RN7SL327P-201ENST00000488659 223 ntBASIC2.27□□□□□ -2.05
SLC6A13Q9NSD5 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC2.27□□□□□ -2.05
SLC6A13Q9NSD5 RNU6-1098P-201ENST00000516772 96 ntBASIC2.27□□□□□ -2.05
SLC6A13Q9NSD5 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.27□□□□□ -2.05
SLC6A13Q9NSD5 SUB1P3-201ENST00000564581 315 ntBASIC2.27□□□□□ -2.05
SLC6A13Q9NSD5 AC026271.5-201ENST00000577873 130 ntBASIC2.27□□□□□ -2.05
SLC6A13Q9NSD5 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.27□□□□□ -2.05
SLC6A13Q9NSD5 AC067747.1-201ENST00000608026 250 ntBASIC2.27□□□□□ -2.05
SLC6A13Q9NSD5 RN7SL853P-201ENST00000617250 223 ntBASIC2.27□□□□□ -2.05
SLC6A13Q9NSD5 MIR203B-201ENST00000636080 86 ntBASIC2.27□□□□□ -2.05
SLC6A13Q9NSD5 Y_RNA.187-201ENST00000363918 113 ntBASIC2.26□□□□□ -2.05
SLC6A13Q9NSD5 RNU6-1040P-201ENST00000383974 107 ntBASIC2.26□□□□□ -2.05
SLC6A13Q9NSD5 RNU6-245P-201ENST00000384020 107 ntBASIC2.26□□□□□ -2.05
SLC6A13Q9NSD5 MIR196B-201ENST00000384852 84 ntBASIC2.26□□□□□ -2.05
SLC6A13Q9NSD5 MIR549A-201ENST00000385268 96 ntBASIC2.26□□□□□ -2.05
SLC6A13Q9NSD5 MIR190B-201ENST00000401119 79 ntBASIC2.26□□□□□ -2.05
SLC6A13Q9NSD5 EDDM3CP-201ENST00000415977 425 ntBASIC2.26□□□□□ -2.05
SLC6A13Q9NSD5 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.26□□□□□ -2.05
SLC6A13Q9NSD5 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.26□□□□□ -2.05
SLC6A13Q9NSD5 PRELID3BP1-201ENST00000457142 540 ntBASIC2.26□□□□□ -2.05
SLC6A13Q9NSD5 RPS23P5-201ENST00000495419 428 ntBASIC2.26□□□□□ -2.05
SLC6A13Q9NSD5 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.26□□□□□ -2.05
SLC6A13Q9NSD5 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.26□□□□□ -2.05
SLC6A13Q9NSD5 RNU6-470P-201ENST00000515954 104 ntBASIC2.26□□□□□ -2.05
SLC6A13Q9NSD5 RNA5SP490-201ENST00000517141 136 ntBASIC2.26□□□□□ -2.05
SLC6A13Q9NSD5 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.26□□□□□ -2.05
SLC6A13Q9NSD5 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.26□□□□□ -2.05
SLC6A13Q9NSD5 IGHVIII-44-202ENST00000636235 289 ntBASIC2.26□□□□□ -2.05
SLC6A13Q9NSD5 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.26□□□□□ -2.05
SLC6A13Q9NSD5 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
SLC6A13Q9NSD5 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
SLC6A13Q9NSD5 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.25□□□□□ -2.05
SLC6A13Q9NSD5 Y_RNA.61-201ENST00000362835 102 ntBASIC2.25□□□□□ -2.05
SLC6A13Q9NSD5 RNU6-797P-201ENST00000363101 109 ntBASIC2.25□□□□□ -2.05
SLC6A13Q9NSD5 Y_RNA.146-201ENST00000363549 102 ntBASIC2.25□□□□□ -2.05
SLC6A13Q9NSD5 RNU6-99P-201ENST00000364721 107 ntBASIC2.25□□□□□ -2.05
SLC6A13Q9NSD5 Y_RNA.577-201ENST00000384794 101 ntBASIC2.25□□□□□ -2.05
SLC6A13Q9NSD5 RNU6-159P-201ENST00000391080 106 ntBASIC2.25□□□□□ -2.05
SLC6A13Q9NSD5 AL359511.1-201ENST00000402970 211 ntBASIC2.25□□□□□ -2.05
SLC6A13Q9NSD5 AC092423.1-201ENST00000430165 186 ntBASIC2.25□□□□□ -2.05
SLC6A13Q9NSD5 AC004386.2-201ENST00000441858 148 ntBASIC2.25□□□□□ -2.05
SLC6A13Q9NSD5 AC009237.7-201ENST00000447357 229 ntBASIC2.25□□□□□ -2.05
SLC6A13Q9NSD5 AL137159.1-201ENST00000452808 512 ntBASIC2.25□□□□□ -2.05
SLC6A13Q9NSD5 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.25□□□□□ -2.05
SLC6A13Q9NSD5 AP000870.1-201ENST00000472927 406 ntBASIC2.25□□□□□ -2.05
SLC6A13Q9NSD5 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.25□□□□□ -2.05
SLC6A13Q9NSD5 ATP5EP1-201ENST00000510257 156 ntBASIC2.25□□□□□ -2.05
SLC6A13Q9NSD5 AC008549.1-201ENST00000512900 643 ntBASIC2.25□□□□□ -2.05
SLC6A13Q9NSD5 RNU6-120P-201ENST00000516077 103 ntBASIC2.25□□□□□ -2.05
SLC6A13Q9NSD5 SNORA31.11-201ENST00000516528 139 ntBASIC2.25□□□□□ -2.05
SLC6A13Q9NSD5 RNU2-44P-201ENST00000516795 194 ntBASIC2.25□□□□□ -2.05
SLC6A13Q9NSD5 RNA5SP137-201ENST00000516833 135 ntBASIC2.25□□□□□ -2.05
SLC6A13Q9NSD5 AC233702.2-202ENST00000562547 291 ntBASIC2.25□□□□□ -2.05
SLC6A13Q9NSD5 MIR5006-201ENST00000583027 110 ntBASIC2.25□□□□□ -2.05
SLC6A13Q9NSD5 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
SLC6A13Q9NSD5 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.25□□□□□ -2.05
SLC6A13Q9NSD5 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.25□□□□□ -2.05
SLC6A13Q9NSD5 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.25□□□□□ -2.05
SLC6A13Q9NSD5 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
SLC6A13Q9NSD5 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.25□□□□□ -2.05
SLC6A13Q9NSD5 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
SLC6A13Q9NSD5 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
SLC6A13Q9NSD5 RNU6-490P-201ENST00000362985 107 ntBASIC2.24□□□□□ -2.05
SLC6A13Q9NSD5 Y_RNA.106-201ENST00000363189 100 ntBASIC2.24□□□□□ -2.05
SLC6A13Q9NSD5 RNU5F-3P-201ENST00000363767 117 ntBASIC2.24□□□□□ -2.05
SLC6A13Q9NSD5 SNORA3A-201ENST00000364113 130 ntBASIC2.24□□□□□ -2.05
SLC6A13Q9NSD5 RNU6-280P-201ENST00000364145 104 ntBASIC2.24□□□□□ -2.05
SLC6A13Q9NSD5 Y_RNA.315-201ENST00000365117 102 ntBASIC2.24□□□□□ -2.05
SLC6A13Q9NSD5 MIR559-201ENST00000385188 96 ntBASIC2.24□□□□□ -2.05
SLC6A13Q9NSD5 RNU1-139P-201ENST00000391307 165 ntBASIC2.24□□□□□ -2.05
SLC6A13Q9NSD5 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.24□□□□□ -2.05
SLC6A13Q9NSD5 USP9YP16-201ENST00000430287 407 ntBASIC2.24□□□□□ -2.05
SLC6A13Q9NSD5 HMGN2P18-201ENST00000450680 270 ntBASIC2.24□□□□□ -2.05
SLC6A13Q9NSD5 MTCO3P8-201ENST00000453691 755 ntBASIC2.24□□□□□ -2.05
SLC6A13Q9NSD5 USP9YP23-201ENST00000455085 407 ntBASIC2.24□□□□□ -2.05
SLC6A13Q9NSD5 RNU7-14P-201ENST00000459331 62 ntBASIC2.24□□□□□ -2.05
SLC6A13Q9NSD5 AC093259.1-201ENST00000509755 300 ntBASIC2.24□□□□□ -2.05
SLC6A13Q9NSD5 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC2.24□□□□□ -2.05
SLC6A13Q9NSD5 RNU6-1114P-201ENST00000516022 107 ntBASIC2.24□□□□□ -2.05
SLC6A13Q9NSD5 RNU6-991P-201ENST00000516168 107 ntBASIC2.24□□□□□ -2.05
SLC6A13Q9NSD5 IGLV3-17-201ENST00000519099 244 ntBASIC2.24□□□□□ -2.05
SLC6A13Q9NSD5 PRELID2P1-201ENST00000552837 301 ntBASIC2.24□□□□□ -2.05
SLC6A13Q9NSD5 AC121758.2-201ENST00000553271 193 ntBASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms