Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 AC063976.3-201ENST00000426849 329 ntBASIC5.18□□□□□ -1.58
RTN4Q9NQC3 AL121914.1-201ENST00000450188 156 ntBASIC5.18□□□□□ -1.58
RTN4Q9NQC3 AC245047.8-201ENST00000456455 284 ntBASIC5.18□□□□□ -1.58
RTN4Q9NQC3 AL133162.1-201ENST00000463228 453 ntBASIC5.18□□□□□ -1.58
RTN4Q9NQC3 RN7SL629P-201ENST00000489622 285 ntBASIC5.18□□□□□ -1.58
RTN4Q9NQC3 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
RTN4Q9NQC3 AC022726.1-201ENST00000587475 207 ntBASIC5.18□□□□□ -1.58
RTN4Q9NQC3 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.18□□□□□ -1.58
RTN4Q9NQC3 SUMO2P15-201ENST00000604285 278 ntBASIC5.18□□□□□ -1.58
RTN4Q9NQC3 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
RTN4Q9NQC3 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
RTN4Q9NQC3 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC5.18□□□□□ -1.58
RTN4Q9NQC3 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
RTN4Q9NQC3 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC5.17□□□□□ -1.58
RTN4Q9NQC3 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RTN4Q9NQC3 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RTN4Q9NQC3 SNORD116-18-201ENST00000383961 92 ntBASIC5.17□□□□□ -1.58
RTN4Q9NQC3 MIR223-201ENST00000385204 110 ntBASIC5.17□□□□□ -1.58
RTN4Q9NQC3 U3.30-201ENST00000391308 210 ntBASIC5.17□□□□□ -1.58
RTN4Q9NQC3 AL138878.1-201ENST00000405131 347 ntBASIC5.17□□□□□ -1.58
RTN4Q9NQC3 SNORA79-201ENST00000408376 140 ntBASIC5.17□□□□□ -1.58
RTN4Q9NQC3 AC244505.4-201ENST00000434905 287 ntBASIC5.17□□□□□ -1.58
RTN4Q9NQC3 SSXP5-201ENST00000443473 287 ntBASIC5.17□□□□□ -1.58
RTN4Q9NQC3 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.17□□□□□ -1.58
RTN4Q9NQC3 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC5.17□□□□□ -1.58
RTN4Q9NQC3 AC090616.3-201ENST00000582184 217 ntBASIC5.17□□□□□ -1.58
RTN4Q9NQC3 AP001485.1-201ENST00000604799 199 ntBASIC5.17□□□□□ -1.58
RTN4Q9NQC3 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC5.17□□□□□ -1.58
RTN4Q9NQC3 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
RTN4Q9NQC3 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RTN4Q9NQC3 RPL23P2-201ENST00000320371 421 ntBASIC5.16□□□□□ -1.58
RTN4Q9NQC3 MIR340-201ENST00000362125 95 ntBASIC5.16□□□□□ -1.58
RTN4Q9NQC3 RNU4-41P-201ENST00000364426 143 ntBASIC5.16□□□□□ -1.58
RTN4Q9NQC3 AL606845.1-201ENST00000404881 255 ntBASIC5.16□□□□□ -1.58
RTN4Q9NQC3 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC5.16□□□□□ -1.58
RTN4Q9NQC3 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC5.16□□□□□ -1.58
RTN4Q9NQC3 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RTN4Q9NQC3 AC140172.1-201ENST00000502928 141 ntBASIC5.16□□□□□ -1.58
RTN4Q9NQC3 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC5.16□□□□□ -1.58
RTN4Q9NQC3 MIR3176-201ENST00000582210 90 ntBASIC5.16□□□□□ -1.58
RTN4Q9NQC3 U2.22-201ENST00000636441 106 ntBASIC5.16□□□□□ -1.58
RTN4Q9NQC3 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
RTN4Q9NQC3 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
RTN4Q9NQC3 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.58
RTN4Q9NQC3 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
RTN4Q9NQC3 Y_RNA.337-201ENST00000365312 102 ntBASIC5.15□□□□□ -1.59
RTN4Q9NQC3 Y_RNA.343-201ENST00000365354 112 ntBASIC5.15□□□□□ -1.59
RTN4Q9NQC3 RNU1-106P-201ENST00000384382 164 ntBASIC5.15□□□□□ -1.59
RTN4Q9NQC3 RNU1-44P-201ENST00000384453 163 ntBASIC5.15□□□□□ -1.59
RTN4Q9NQC3 AC114755.2-201ENST00000413520 361 ntBASIC5.15□□□□□ -1.59
RTN4Q9NQC3 BMS1P22-201ENST00000414726 313 ntBASIC5.15□□□□□ -1.59
RTN4Q9NQC3 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC5.15□□□□□ -1.59
RTN4Q9NQC3 ATP5J2P3-201ENST00000451550 258 ntBASIC5.15□□□□□ -1.59
RTN4Q9NQC3 RN7SL30P-201ENST00000488416 306 ntBASIC5.15□□□□□ -1.59
RTN4Q9NQC3 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.15□□□□□ -1.59
RTN4Q9NQC3 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.15□□□□□ -1.59
RTN4Q9NQC3 MIR4489-201ENST00000578869 62 ntBASIC5.15□□□□□ -1.59
RTN4Q9NQC3 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC5.15□□□□□ -1.59
RTN4Q9NQC3 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC5.15□□□□□ -1.59
RTN4Q9NQC3 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
RTN4Q9NQC3 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
RTN4Q9NQC3 MIR29C-201ENST00000385231 88 ntBASIC5.14□□□□□ -1.59
RTN4Q9NQC3 RN7SKP101-201ENST00000411376 320 ntBASIC5.14□□□□□ -1.59
RTN4Q9NQC3 RNU7-94P-201ENST00000459576 63 ntBASIC5.14□□□□□ -1.59
RTN4Q9NQC3 RN7SL177P-201ENST00000476596 299 ntBASIC5.14□□□□□ -1.59
RTN4Q9NQC3 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC5.14□□□□□ -1.59
RTN4Q9NQC3 RNU1-142P-201ENST00000516682 145 ntBASIC5.14□□□□□ -1.59
RTN4Q9NQC3 RNU6-126P-201ENST00000516685 103 ntBASIC5.14□□□□□ -1.59
RTN4Q9NQC3 RN7SL722P-201ENST00000617780 284 ntBASIC5.14□□□□□ -1.59
RTN4Q9NQC3 RN7SL565P-201ENST00000618246 284 ntBASIC5.14□□□□□ -1.59
RTN4Q9NQC3 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
RTN4Q9NQC3 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RTN4Q9NQC3 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RTN4Q9NQC3 SNORA38-201ENST00000363946 132 ntBASIC5.13□□□□□ -1.59
RTN4Q9NQC3 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC5.13□□□□□ -1.59
RTN4Q9NQC3 RNU6-417P-201ENST00000384712 107 ntBASIC5.13□□□□□ -1.59
RTN4Q9NQC3 RNU1-82P-201ENST00000390851 165 ntBASIC5.13□□□□□ -1.59
RTN4Q9NQC3 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RTN4Q9NQC3 RNU6-383P-201ENST00000410864 94 ntBASIC5.13□□□□□ -1.59
RTN4Q9NQC3 RNU2-55P-201ENST00000411146 174 ntBASIC5.13□□□□□ -1.59
RTN4Q9NQC3 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC5.13□□□□□ -1.59
RTN4Q9NQC3 RN7SL585P-201ENST00000470538 280 ntBASIC5.13□□□□□ -1.59
RTN4Q9NQC3 AC024995.1-201ENST00000523014 93 ntBASIC5.13□□□□□ -1.59
RTN4Q9NQC3 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC5.13□□□□□ -1.59
RTN4Q9NQC3 MIR3910-1-201ENST00000580936 111 ntBASIC5.13□□□□□ -1.59
RTN4Q9NQC3 AC068700.1-201ENST00000565862 3754 ntBASIC5.13□□□□□ -1.59
RTN4Q9NQC3 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RTN4Q9NQC3 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC5.12□□□□□ -1.59
RTN4Q9NQC3 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
RTN4Q9NQC3 SNORA74A-201ENST00000364089 198 ntBASIC5.12□□□□□ -1.59
RTN4Q9NQC3 Y_RNA.400-201ENST00000383963 111 ntBASIC5.12□□□□□ -1.59
RTN4Q9NQC3 MIR15B-201ENST00000385045 98 ntBASIC5.12□□□□□ -1.59
RTN4Q9NQC3 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC5.12□□□□□ -1.59
RTN4Q9NQC3 AC079168.2-201ENST00000453977 416 ntBASIC5.12□□□□□ -1.59
RTN4Q9NQC3 RN7SL594P-201ENST00000470590 287 ntBASIC5.12□□□□□ -1.59
RTN4Q9NQC3 SCARNA8-201ENST00000515924 131 ntBASIC5.12□□□□□ -1.59
RTN4Q9NQC3 RNU1-6P-201ENST00000516290 144 ntBASIC5.12□□□□□ -1.59
RTN4Q9NQC3 MIR1269B-201ENST00000580405 75 ntBASIC5.12□□□□□ -1.59
RTN4Q9NQC3 AC091178.1-203ENST00000584586 279 ntBASIC5.12□□□□□ -1.59
RTN4Q9NQC3 AL356218.2-201ENST00000605264 187 ntBASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 136.8 ms