Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 Y_RNA.711-201ENST00000516993 102 ntBASIC2.17□□□□□ -2.06
SIX2Q9NPC8 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.17□□□□□ -2.06
SIX2Q9NPC8 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.17□□□□□ -2.06
SIX2Q9NPC8 AC105245.1-201ENST00000581934 244 ntBASIC2.17□□□□□ -2.06
SIX2Q9NPC8 AC002984.1-201ENST00000591692 448 ntBASIC2.17□□□□□ -2.06
SIX2Q9NPC8 RPL30P11-203ENST00000598995 310 ntBASIC2.17□□□□□ -2.06
SIX2Q9NPC8 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.17□□□□□ -2.06
SIX2Q9NPC8 7SK.7-201ENST00000603504 247 ntBASIC2.17□□□□□ -2.06
SIX2Q9NPC8 AL590808.1-201ENST00000618696 141 ntBASIC2.17□□□□□ -2.06
SIX2Q9NPC8 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.17□□□□□ -2.06
SIX2Q9NPC8 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.16□□□□□ -2.06
SIX2Q9NPC8 RNU6-874P-201ENST00000362390 105 ntBASIC2.16□□□□□ -2.06
SIX2Q9NPC8 RNU4-56P-201ENST00000364700 142 ntBASIC2.16□□□□□ -2.06
SIX2Q9NPC8 Y_RNA.428-201ENST00000384078 102 ntBASIC2.16□□□□□ -2.06
SIX2Q9NPC8 U6atac.2-201ENST00000408644 118 ntBASIC2.16□□□□□ -2.06
SIX2Q9NPC8 RNU6-1156P-201ENST00000410365 100 ntBASIC2.16□□□□□ -2.06
SIX2Q9NPC8 AL513477.1-202ENST00000417061 214 ntBASIC2.16□□□□□ -2.06
SIX2Q9NPC8 AC007098.1-201ENST00000420122 367 ntBASIC2.16□□□□□ -2.06
SIX2Q9NPC8 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.16□□□□□ -2.06
SIX2Q9NPC8 AC096638.1-201ENST00000444678 216 ntBASIC2.16□□□□□ -2.06
SIX2Q9NPC8 Z96811.1-201ENST00000445880 108 ntBASIC2.16□□□□□ -2.06
SIX2Q9NPC8 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.16□□□□□ -2.06
SIX2Q9NPC8 AC090096.1-201ENST00000489168 390 ntBASIC2.16□□□□□ -2.06
SIX2Q9NPC8 Y_RNA.661-201ENST00000516003 99 ntBASIC2.16□□□□□ -2.06
SIX2Q9NPC8 RNU1-40P-201ENST00000516816 164 ntBASIC2.16□□□□□ -2.06
SIX2Q9NPC8 RNU1-97P-201ENST00000516872 164 ntBASIC2.16□□□□□ -2.06
SIX2Q9NPC8 SNORD116.3-201ENST00000517176 78 ntBASIC2.16□□□□□ -2.06
SIX2Q9NPC8 COX6CP5-201ENST00000527162 228 ntBASIC2.16□□□□□ -2.06
SIX2Q9NPC8 AP003072.1-201ENST00000531740 145 ntBASIC2.16□□□□□ -2.06
SIX2Q9NPC8 CYP4A27P-201ENST00000567218 190 ntBASIC2.16□□□□□ -2.06
SIX2Q9NPC8 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.16□□□□□ -2.06
SIX2Q9NPC8 AL353621.2-201ENST00000605340 133 ntBASIC2.16□□□□□ -2.06
SIX2Q9NPC8 AL355802.3-201ENST00000607571 545 ntBASIC2.16□□□□□ -2.06
SIX2Q9NPC8 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC2.16□□□□□ -2.06
SIX2Q9NPC8 RMST_6.1-201ENST00000611980 203 ntBASIC2.16□□□□□ -2.06
SIX2Q9NPC8 MIR1244-1-201ENST00000612829 85 ntBASIC2.16□□□□□ -2.06
SIX2Q9NPC8 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.16□□□□□ -2.06
SIX2Q9NPC8 MIR1244-3-201ENST00000635744 85 ntBASIC2.16□□□□□ -2.06
SIX2Q9NPC8 MIR1244-2-201ENST00000636449 85 ntBASIC2.16□□□□□ -2.06
SIX2Q9NPC8 MIR1244-4-202ENST00000636813 85 ntBASIC2.16□□□□□ -2.06
SIX2Q9NPC8 AC099654.10-201ENST00000640395 161 ntBASIC2.16□□□□□ -2.06
SIX2Q9NPC8 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.16□□□□□ -2.06
SIX2Q9NPC8 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
SIX2Q9NPC8 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.15□□□□□ -2.07
SIX2Q9NPC8 snoU2_19.1-201ENST00000362361 80 ntBASIC2.15□□□□□ -2.07
SIX2Q9NPC8 RNU4-15P-201ENST00000362613 141 ntBASIC2.15□□□□□ -2.07
SIX2Q9NPC8 Y_RNA.111-201ENST00000363248 100 ntBASIC2.15□□□□□ -2.07
SIX2Q9NPC8 Y_RNA.216-201ENST00000364205 93 ntBASIC2.15□□□□□ -2.07
SIX2Q9NPC8 SET-203ENST00000372688 801 ntTSL 2 BASIC2.15□□□□□ -2.07
SIX2Q9NPC8 RNU6-17P-201ENST00000384245 107 ntBASIC2.15□□□□□ -2.07
SIX2Q9NPC8 U8.10-201ENST00000384260 133 ntBASIC2.15□□□□□ -2.07
SIX2Q9NPC8 RNU6-18P-201ENST00000384527 107 ntBASIC2.15□□□□□ -2.07
SIX2Q9NPC8 MIR32-201ENST00000384965 70 ntBASIC2.15□□□□□ -2.07
SIX2Q9NPC8 MIR190B-201ENST00000401119 79 ntBASIC2.15□□□□□ -2.07
SIX2Q9NPC8 RNA5SP201-201ENST00000410316 124 ntBASIC2.15□□□□□ -2.07
SIX2Q9NPC8 RPS26P42-201ENST00000413485 326 ntBASIC2.15□□□□□ -2.07
SIX2Q9NPC8 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.15□□□□□ -2.07
SIX2Q9NPC8 AC092423.1-201ENST00000430165 186 ntBASIC2.15□□□□□ -2.07
SIX2Q9NPC8 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.15□□□□□ -2.07
SIX2Q9NPC8 AL445646.1-201ENST00000431784 216 ntBASIC2.15□□□□□ -2.07
SIX2Q9NPC8 OR2AQ1P-201ENST00000451972 200 ntBASIC2.15□□□□□ -2.07
SIX2Q9NPC8 AC080013.2-201ENST00000460866 323 ntBASIC2.15□□□□□ -2.07
SIX2Q9NPC8 TOMM22P6-201ENST00000465035 409 ntBASIC2.15□□□□□ -2.07
SIX2Q9NPC8 AL163540.1-201ENST00000485382 386 ntBASIC2.15□□□□□ -2.07
SIX2Q9NPC8 AC140059.1-201ENST00000489238 361 ntBASIC2.15□□□□□ -2.07
SIX2Q9NPC8 AC079804.2-201ENST00000490376 200 ntBASIC2.15□□□□□ -2.07
SIX2Q9NPC8 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.15□□□□□ -2.07
SIX2Q9NPC8 Y_RNA.706-201ENST00000516933 99 ntBASIC2.15□□□□□ -2.07
SIX2Q9NPC8 RN7SKP295-201ENST00000517264 153 ntBASIC2.15□□□□□ -2.07
SIX2Q9NPC8 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.15□□□□□ -2.07
SIX2Q9NPC8 AL442663.2-201ENST00000554385 511 ntBASIC2.15□□□□□ -2.07
SIX2Q9NPC8 MIR3923-201ENST00000579521 83 ntBASIC2.15□□□□□ -2.07
SIX2Q9NPC8 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.15□□□□□ -2.07
SIX2Q9NPC8 AC100812.1-201ENST00000607622 580 ntBASIC2.15□□□□□ -2.07
SIX2Q9NPC8 AC069294.1-201ENST00000608397 350 ntBASIC2.15□□□□□ -2.07
SIX2Q9NPC8 AC005520.5-201ENST00000613926 164 ntBASIC2.15□□□□□ -2.07
SIX2Q9NPC8 AC007742.2-201ENST00000618226 398 ntBASIC2.15□□□□□ -2.07
SIX2Q9NPC8 AC137590.2-201ENST00000619709 240 ntBASIC2.15□□□□□ -2.07
SIX2Q9NPC8 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.15□□□□□ -2.07
SIX2Q9NPC8 ZNF658B-202ENST00000615961 3375 ntBASIC2.15□□□□□ -2.07
SIX2Q9NPC8 MTND4P27-201ENST00000450813 1354 ntBASIC2.14□□□□□ -2.07
SIX2Q9NPC8 AC026241.1-201ENST00000517873 2142 ntBASIC2.14□□□□□ -2.07
SIX2Q9NPC8 Y_RNA.28-201ENST00000362554 111 ntBASIC2.14□□□□□ -2.07
SIX2Q9NPC8 RNA5SP393-201ENST00000363423 117 ntBASIC2.14□□□□□ -2.07
SIX2Q9NPC8 SNORA63-201ENST00000363450 132 ntBASIC2.14□□□□□ -2.07
SIX2Q9NPC8 SNORD56.5-201ENST00000364281 72 ntBASIC2.14□□□□□ -2.07
SIX2Q9NPC8 Y_RNA.326-201ENST00000365176 113 ntBASIC2.14□□□□□ -2.07
SIX2Q9NPC8 RNU1-115P-201ENST00000365329 160 ntBASIC2.14□□□□□ -2.07
SIX2Q9NPC8 SNORA22B-201ENST00000383876 138 ntBASIC2.14□□□□□ -2.07
SIX2Q9NPC8 RNY1P14-201ENST00000384426 108 ntBASIC2.14□□□□□ -2.07
SIX2Q9NPC8 MIR625-201ENST00000385047 85 ntBASIC2.14□□□□□ -2.07
SIX2Q9NPC8 MIR153-2-201ENST00000385225 87 ntBASIC2.14□□□□□ -2.07
SIX2Q9NPC8 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.14□□□□□ -2.07
SIX2Q9NPC8 MCFD2P1-201ENST00000417812 300 ntBASIC2.14□□□□□ -2.07
SIX2Q9NPC8 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.14□□□□□ -2.07
SIX2Q9NPC8 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.14□□□□□ -2.07
SIX2Q9NPC8 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.14□□□□□ -2.07
SIX2Q9NPC8 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.14□□□□□ -2.07
SIX2Q9NPC8 MTND4P19-201ENST00000446659 478 ntBASIC2.14□□□□□ -2.07
SIX2Q9NPC8 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms