Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.54□□□□□ -1.84
SSU72Q9NP77 RNA5SP38-201ENST00000410750 119 ntBASIC3.54□□□□□ -1.84
SSU72Q9NP77 RPL30P13-201ENST00000418873 348 ntBASIC3.54□□□□□ -1.84
SSU72Q9NP77 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC3.54□□□□□ -1.84
SSU72Q9NP77 AC245047.8-201ENST00000456455 284 ntBASIC3.54□□□□□ -1.84
SSU72Q9NP77 HMGN1P18-201ENST00000457642 277 ntBASIC3.54□□□□□ -1.84
SSU72Q9NP77 AC112771.1-201ENST00000463581 102 ntBASIC3.54□□□□□ -1.84
SSU72Q9NP77 CENPBD1P1-201ENST00000464061 469 ntBASIC3.54□□□□□ -1.84
SSU72Q9NP77 RPS29P22-201ENST00000472363 168 ntBASIC3.54□□□□□ -1.84
SSU72Q9NP77 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.54□□□□□ -1.84
SSU72Q9NP77 MRPL49P2-201ENST00000521066 465 ntBASIC3.54□□□□□ -1.84
SSU72Q9NP77 AC104027.1-201ENST00000521887 300 ntBASIC3.54□□□□□ -1.84
SSU72Q9NP77 AC027176.1-201ENST00000560204 514 ntBASIC3.54□□□□□ -1.84
SSU72Q9NP77 MIR5187-201ENST00000583479 76 ntBASIC3.54□□□□□ -1.84
SSU72Q9NP77 AP003355.3-201ENST00000623465 114 ntBASIC3.54□□□□□ -1.84
SSU72Q9NP77 AC112484.5-201ENST00000624189 228 ntBASIC3.54□□□□□ -1.84
SSU72Q9NP77 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SSU72Q9NP77 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SSU72Q9NP77 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SSU72Q9NP77 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SSU72Q9NP77 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SSU72Q9NP77 AC002546.1-201ENST00000588041 2504 ntBASIC3.53□□□□□ -1.84
SSU72Q9NP77 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.53□□□□□ -1.84
SSU72Q9NP77 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC3.53□□□□□ -1.84
SSU72Q9NP77 RNA5SP383-201ENST00000362934 120 ntBASIC3.53□□□□□ -1.84
SSU72Q9NP77 RNU1-57P-201ENST00000384491 166 ntBASIC3.53□□□□□ -1.84
SSU72Q9NP77 Y_RNA.542-201ENST00000384641 111 ntBASIC3.53□□□□□ -1.84
SSU72Q9NP77 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
SSU72Q9NP77 RNA5SP252-201ENST00000391131 119 ntBASIC3.53□□□□□ -1.84
SSU72Q9NP77 SNRPGP5-201ENST00000456003 220 ntBASIC3.53□□□□□ -1.84
SSU72Q9NP77 RPL23AP62-201ENST00000463396 453 ntBASIC3.53□□□□□ -1.84
SSU72Q9NP77 RPL23AP67-201ENST00000465341 474 ntBASIC3.53□□□□□ -1.84
SSU72Q9NP77 AP002884.2-201ENST00000471647 395 ntBASIC3.53□□□□□ -1.84
SSU72Q9NP77 RNU6-1007P-201ENST00000516586 107 ntBASIC3.53□□□□□ -1.84
SSU72Q9NP77 RNU6-1234P-201ENST00000516877 103 ntBASIC3.53□□□□□ -1.84
SSU72Q9NP77 HSPE1P18-201ENST00000517602 280 ntBASIC3.53□□□□□ -1.84
SSU72Q9NP77 AC079598.5-201ENST00000547460 117 ntBASIC3.53□□□□□ -1.84
SSU72Q9NP77 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.53□□□□□ -1.84
SSU72Q9NP77 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
SSU72Q9NP77 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.52□□□□□ -1.85
SSU72Q9NP77 GABRG2-229ENST00000641017 3628 ntBASIC3.52□□□□□ -1.85
SSU72Q9NP77 RNY1P11-201ENST00000363759 113 ntBASIC3.52□□□□□ -1.85
SSU72Q9NP77 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.52□□□□□ -1.85
SSU72Q9NP77 AL365496.1-201ENST00000426885 215 ntBASIC3.52□□□□□ -1.85
SSU72Q9NP77 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC3.52□□□□□ -1.85
SSU72Q9NP77 AL441985.1-201ENST00000457727 251 ntBASIC3.52□□□□□ -1.85
SSU72Q9NP77 RPS27P29-201ENST00000463110 252 ntBASIC3.52□□□□□ -1.85
SSU72Q9NP77 RN7SL323P-201ENST00000494712 295 ntBASIC3.52□□□□□ -1.85
SSU72Q9NP77 RNU6-1333P-201ENST00000516162 93 ntBASIC3.52□□□□□ -1.85
SSU72Q9NP77 RNA5SP309-201ENST00000516670 106 ntBASIC3.52□□□□□ -1.85
SSU72Q9NP77 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.52□□□□□ -1.85
SSU72Q9NP77 AC025754.2-201ENST00000606491 432 ntBASIC3.52□□□□□ -1.85
SSU72Q9NP77 AL391903.3-201ENST00000612158 163 ntBASIC3.52□□□□□ -1.85
SSU72Q9NP77 AC073476.4-201ENST00000628409 72 ntBASIC3.52□□□□□ -1.85
SSU72Q9NP77 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.52□□□□□ -1.85
SSU72Q9NP77 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.52□□□□□ -1.85
SSU72Q9NP77 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.52□□□□□ -1.85
SSU72Q9NP77 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
SSU72Q9NP77 MAPK10-266ENST00000641066 6555 ntBASIC3.52□□□□□ -1.85
SSU72Q9NP77 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SSU72Q9NP77 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SSU72Q9NP77 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SSU72Q9NP77 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.51□□□□□ -1.85
SSU72Q9NP77 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
SSU72Q9NP77 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.51□□□□□ -1.85
SSU72Q9NP77 ZNF702P-202ENST00000434269 1966 ntBASIC3.51□□□□□ -1.85
SSU72Q9NP77 Y_RNA.229-201ENST00000364347 113 ntBASIC3.51□□□□□ -1.85
SSU72Q9NP77 SNORD32B-201ENST00000364460 84 ntBASIC3.51□□□□□ -1.85
SSU72Q9NP77 U8.7-201ENST00000364940 136 ntBASIC3.51□□□□□ -1.85
SSU72Q9NP77 AC126124.2-201ENST00000413542 321 ntBASIC3.51□□□□□ -1.85
SSU72Q9NP77 AC074290.1-201ENST00000448883 135 ntBASIC3.51□□□□□ -1.85
SSU72Q9NP77 RNU7-170P-201ENST00000459303 61 ntBASIC3.51□□□□□ -1.85
SSU72Q9NP77 AC107934.2-201ENST00000518653 310 ntBASIC3.51□□□□□ -1.85
SSU72Q9NP77 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC3.51□□□□□ -1.85
SSU72Q9NP77 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC3.51□□□□□ -1.85
SSU72Q9NP77 AC025281.1-201ENST00000567026 265 ntBASIC3.51□□□□□ -1.85
SSU72Q9NP77 MIR5688-201ENST00000580619 83 ntBASIC3.51□□□□□ -1.85
SSU72Q9NP77 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.51□□□□□ -1.85
SSU72Q9NP77 AC017071.1-201ENST00000564407 2204 ntBASIC3.51□□□□□ -1.85
SSU72Q9NP77 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
SSU72Q9NP77 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SSU72Q9NP77 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SSU72Q9NP77 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.5□□□□□ -1.85
SSU72Q9NP77 Y_RNA.124-201ENST00000363339 93 ntBASIC3.5□□□□□ -1.85
SSU72Q9NP77 RNU6-1205P-201ENST00000363625 106 ntBASIC3.5□□□□□ -1.85
SSU72Q9NP77 Y_RNA.273-201ENST00000364703 102 ntBASIC3.5□□□□□ -1.85
SSU72Q9NP77 Y_RNA.337-201ENST00000365312 102 ntBASIC3.5□□□□□ -1.85
SSU72Q9NP77 SNORA62-201ENST00000365493 153 ntBASIC3.5□□□□□ -1.85
SSU72Q9NP77 SNORD116-14-201ENST00000383894 92 ntBASIC3.5□□□□□ -1.85
SSU72Q9NP77 SNORD116-17-201ENST00000383929 92 ntBASIC3.5□□□□□ -1.85
SSU72Q9NP77 Y_RNA.420-201ENST00000384043 110 ntBASIC3.5□□□□□ -1.85
SSU72Q9NP77 SNORD116-15-201ENST00000384445 92 ntBASIC3.5□□□□□ -1.85
SSU72Q9NP77 SNORD116-19-201ENST00000384729 92 ntBASIC3.5□□□□□ -1.85
SSU72Q9NP77 RNU6-376P-201ENST00000384731 106 ntBASIC3.5□□□□□ -1.85
SSU72Q9NP77 MIR513C-201ENST00000401352 84 ntBASIC3.5□□□□□ -1.85
SSU72Q9NP77 MIR1185-2-201ENST00000408687 86 ntBASIC3.5□□□□□ -1.85
SSU72Q9NP77 HMGN2P31-201ENST00000432430 273 ntBASIC3.5□□□□□ -1.85
SSU72Q9NP77 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC3.5□□□□□ -1.85
SSU72Q9NP77 Z75741.1-201ENST00000446793 314 ntBASIC3.5□□□□□ -1.85
SSU72Q9NP77 RPS29P33-201ENST00000456717 146 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms