Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 MESTIT1_1.1-201ENST00000618871 140 ntBASIC0.33□□□□□ -2.36
KIAA1549Q9HCM3 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.33□□□□□ -2.36
KIAA1549Q9HCM3 AL157786.1-207ENST00000627771 695 ntBASIC0.33□□□□□ -2.36
KIAA1549Q9HCM3 MIR338-201ENST00000636369 67 ntBASIC0.33□□□□□ -2.36
KIAA1549Q9HCM3 RNA5SP457-201ENST00000363657 124 ntBASIC0.32□□□□□ -2.36
KIAA1549Q9HCM3 U3.9-201ENST00000363823 204 ntBASIC0.32□□□□□ -2.36
KIAA1549Q9HCM3 RNU4-48P-201ENST00000365559 182 ntBASIC0.32□□□□□ -2.36
KIAA1549Q9HCM3 MIR10B-201ENST00000385011 110 ntBASIC0.32□□□□□ -2.36
KIAA1549Q9HCM3 SNORD89-201ENST00000390981 114 ntBASIC0.32□□□□□ -2.36
KIAA1549Q9HCM3 RPS27AP14-201ENST00000422868 454 ntBASIC0.32□□□□□ -2.36
KIAA1549Q9HCM3 AL606517.2-201ENST00000442855 241 ntBASIC0.32□□□□□ -2.36
KIAA1549Q9HCM3 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC0.32□□□□□ -2.36
KIAA1549Q9HCM3 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC0.32□□□□□ -2.36
KIAA1549Q9HCM3 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC0.32□□□□□ -2.36
KIAA1549Q9HCM3 MIR4753-201ENST00000585119 83 ntBASIC0.32□□□□□ -2.36
KIAA1549Q9HCM3 AC146944.4-201ENST00000602697 718 ntBASIC0.32□□□□□ -2.36
KIAA1549Q9HCM3 AC023932.2-201ENST00000603176 175 ntBASIC0.32□□□□□ -2.36
KIAA1549Q9HCM3 AC105148.1-201ENST00000604961 409 ntBASIC0.32□□□□□ -2.36
KIAA1549Q9HCM3 MIR2909-201ENST00000617113 69 ntBASIC0.32□□□□□ -2.36
KIAA1549Q9HCM3 uc_338.11-201ENST00000619132 160 ntBASIC0.32□□□□□ -2.36
KIAA1549Q9HCM3 MIR8054-201ENST00000620877 86 ntBASIC0.32□□□□□ -2.36
KIAA1549Q9HCM3 UGP2-231ENST00000627474 264 ntTSL 5 BASIC0.32□□□□□ -2.36
KIAA1549Q9HCM3 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.32□□□□□ -2.36
KIAA1549Q9HCM3 Y_RNA.115-201ENST00000363272 98 ntBASIC0.32□□□□□ -2.36
KIAA1549Q9HCM3 AC245047.3-201ENST00000429428 127 ntBASIC0.32□□□□□ -2.36
KIAA1549Q9HCM3 AC092423.1-201ENST00000430165 186 ntBASIC0.32□□□□□ -2.36
KIAA1549Q9HCM3 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC0.32□□□□□ -2.36
KIAA1549Q9HCM3 AC119618.1-201ENST00000434191 222 ntBASIC0.32□□□□□ -2.36
KIAA1549Q9HCM3 ZNF736P4Y-201ENST00000454995 1243 ntBASIC0.32□□□□□ -2.36
KIAA1549Q9HCM3 RNU7-94P-201ENST00000459576 63 ntBASIC0.32□□□□□ -2.36
KIAA1549Q9HCM3 AL049829.1-201ENST00000465411 156 ntBASIC0.32□□□□□ -2.36
KIAA1549Q9HCM3 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.32□□□□□ -2.36
KIAA1549Q9HCM3 AC006386.1-201ENST00000619436 415 ntBASIC0.32□□□□□ -2.36
KIAA1549Q9HCM3 AP000484.1-201ENST00000620067 1252 ntBASIC0.32□□□□□ -2.36
KIAA1549Q9HCM3 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.32□□□□□ -2.36
KIAA1549Q9HCM3 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
KIAA1549Q9HCM3 MTND4P16-201ENST00000466108 1367 ntBASIC0.31□□□□□ -2.36
KIAA1549Q9HCM3 RNU5E-10P-201ENST00000363506 118 ntBASIC0.31□□□□□ -2.36
KIAA1549Q9HCM3 Y_RNA.251-201ENST00000364551 99 ntBASIC0.31□□□□□ -2.36
KIAA1549Q9HCM3 Y_RNA.295-201ENST00000364918 102 ntBASIC0.31□□□□□ -2.36
KIAA1549Q9HCM3 RNU6-906P-201ENST00000384700 70 ntBASIC0.31□□□□□ -2.36
KIAA1549Q9HCM3 RNU7-90P-201ENST00000459216 62 ntBASIC0.31□□□□□ -2.36
KIAA1549Q9HCM3 AC010587.1-201ENST00000505809 469 ntBASIC0.31□□□□□ -2.36
KIAA1549Q9HCM3 AC104136.1-201ENST00000512969 394 ntBASIC0.31□□□□□ -2.36
KIAA1549Q9HCM3 RNU6-1069P-201ENST00000516612 133 ntBASIC0.31□□□□□ -2.36
KIAA1549Q9HCM3 AC022616.6-201ENST00000520479 119 ntBASIC0.31□□□□□ -2.36
KIAA1549Q9HCM3 AC091489.2-201ENST00000566263 604 ntBASIC0.31□□□□□ -2.36
KIAA1549Q9HCM3 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC0.31□□□□□ -2.36
KIAA1549Q9HCM3 Z99289.3-201ENST00000605586 594 ntBASIC0.31□□□□□ -2.36
KIAA1549Q9HCM3 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.31□□□□□ -2.36
KIAA1549Q9HCM3 AC106754.2-201ENST00000623006 233 ntBASIC0.31□□□□□ -2.36
KIAA1549Q9HCM3 AC068647.2-201ENST00000637380 353 ntBASIC0.31□□□□□ -2.36
KIAA1549Q9HCM3 Y_RNA.18-201ENST00000362461 102 ntBASIC0.3□□□□□ -2.36
KIAA1549Q9HCM3 RNA5SP361-201ENST00000362686 118 ntBASIC0.3□□□□□ -2.36
KIAA1549Q9HCM3 RNU6-433P-201ENST00000363216 104 ntBASIC0.3□□□□□ -2.36
KIAA1549Q9HCM3 RNU6-877P-201ENST00000383868 107 ntBASIC0.3□□□□□ -2.36
KIAA1549Q9HCM3 AL031577.2-201ENST00000404133 280 ntBASIC0.3□□□□□ -2.36
KIAA1549Q9HCM3 MIR1253-201ENST00000408273 105 ntBASIC0.3□□□□□ -2.36
KIAA1549Q9HCM3 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC0.3□□□□□ -2.36
KIAA1549Q9HCM3 AL133396.1-201ENST00000432048 687 ntBASIC0.3□□□□□ -2.36
KIAA1549Q9HCM3 USP9YP28-201ENST00000435142 589 ntBASIC0.3□□□□□ -2.36
KIAA1549Q9HCM3 AL031313.1-201ENST00000448435 256 ntBASIC0.3□□□□□ -2.36
KIAA1549Q9HCM3 MTCO2P29-201ENST00000465212 189 ntBASIC0.3□□□□□ -2.36
KIAA1549Q9HCM3 RPS26P48-201ENST00000491713 339 ntBASIC0.3□□□□□ -2.36
KIAA1549Q9HCM3 MTCO3P7-201ENST00000510008 774 ntBASIC0.3□□□□□ -2.36
KIAA1549Q9HCM3 SNORD111.1-201ENST00000516421 86 ntBASIC0.3□□□□□ -2.36
KIAA1549Q9HCM3 SNORA62.5-201ENST00000516634 120 ntBASIC0.3□□□□□ -2.36
KIAA1549Q9HCM3 RNU6-922P-201ENST00000516753 99 ntBASIC0.3□□□□□ -2.36
KIAA1549Q9HCM3 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC0.3□□□□□ -2.36
KIAA1549Q9HCM3 AC024995.1-201ENST00000523014 93 ntBASIC0.3□□□□□ -2.36
KIAA1549Q9HCM3 AP003072.2-201ENST00000527756 676 ntBASIC0.3□□□□□ -2.36
KIAA1549Q9HCM3 AC104465.1-201ENST00000611365 139 ntBASIC0.3□□□□□ -2.36
KIAA1549Q9HCM3 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.3□□□□□ -2.36
KIAA1549Q9HCM3 BX322639.1-202ENST00000423987 2213 ntBASIC0.3□□□□□ -2.36
KIAA1549Q9HCM3 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
KIAA1549Q9HCM3 RNU6-552P-201ENST00000362869 119 ntBASIC0.3□□□□□ -2.36
KIAA1549Q9HCM3 Y_RNA.576-201ENST00000384781 102 ntBASIC0.3□□□□□ -2.36
KIAA1549Q9HCM3 RN7SKP200-201ENST00000410564 320 ntBASIC0.3□□□□□ -2.36
KIAA1549Q9HCM3 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.3□□□□□ -2.36
KIAA1549Q9HCM3 AC090960.1-201ENST00000421072 306 ntBASIC0.3□□□□□ -2.36
KIAA1549Q9HCM3 AL354692.1-201ENST00000423044 315 ntBASIC0.3□□□□□ -2.36
KIAA1549Q9HCM3 MTCO2P7-201ENST00000446518 666 ntBASIC0.3□□□□□ -2.36
KIAA1549Q9HCM3 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.3□□□□□ -2.36
KIAA1549Q9HCM3 RNU4-57P-201ENST00000515980 135 ntBASIC0.3□□□□□ -2.36
KIAA1549Q9HCM3 RNU6-197P-201ENST00000516680 100 ntBASIC0.3□□□□□ -2.36
KIAA1549Q9HCM3 RNU1-142P-201ENST00000516682 145 ntBASIC0.3□□□□□ -2.36
KIAA1549Q9HCM3 AC109479.2-201ENST00000517842 174 ntBASIC0.3□□□□□ -2.36
KIAA1549Q9HCM3 AC103996.1-201ENST00000555468 102 ntBASIC0.3□□□□□ -2.36
KIAA1549Q9HCM3 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.3□□□□□ -2.36
KIAA1549Q9HCM3 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC0.3□□□□□ -2.36
KIAA1549Q9HCM3 BNIP3P40-201ENST00000596017 556 ntBASIC0.3□□□□□ -2.36
KIAA1549Q9HCM3 AL162424.1-201ENST00000602325 221 ntBASIC0.3□□□□□ -2.36
KIAA1549Q9HCM3 AL136221.1-201ENST00000621449 509 ntBASIC0.3□□□□□ -2.36
KIAA1549Q9HCM3 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC0.3□□□□□ -2.36
KIAA1549Q9HCM3 RNU4-79P-201ENST00000362764 141 ntBASIC0.29□□□□□ -2.36
KIAA1549Q9HCM3 RNY1P12-201ENST00000364251 105 ntBASIC0.29□□□□□ -2.36
KIAA1549Q9HCM3 RNU6-1200P-201ENST00000384162 107 ntBASIC0.29□□□□□ -2.36
KIAA1549Q9HCM3 MIR549A-201ENST00000385268 96 ntBASIC0.29□□□□□ -2.36
KIAA1549Q9HCM3 RNA5SP323-201ENST00000391094 133 ntBASIC0.29□□□□□ -2.36
KIAA1549Q9HCM3 RPS29P13-201ENST00000402041 169 ntBASIC0.29□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms