Protein–RNA interactions for Protein: Q9HB65

ELL3, RNA polymerase II elongation factor ELL3, humanhuman

Predicted RBP Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ELL3Q9HB65 AL035666.1-201ENST00000446195 348 ntBASIC1.74□□□□□ -2.13
ELL3Q9HB65 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.74□□□□□ -2.13
ELL3Q9HB65 OR2AQ1P-201ENST00000451972 200 ntBASIC1.74□□□□□ -2.13
ELL3Q9HB65 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.74□□□□□ -2.13
ELL3Q9HB65 RNU7-14P-201ENST00000459331 62 ntBASIC1.74□□□□□ -2.13
ELL3Q9HB65 MTND4P17-201ENST00000470444 350 ntBASIC1.74□□□□□ -2.13
ELL3Q9HB65 RPL30P10-201ENST00000488148 337 ntBASIC1.74□□□□□ -2.13
ELL3Q9HB65 HMGN1P12-201ENST00000499125 195 ntBASIC1.74□□□□□ -2.13
ELL3Q9HB65 Y_RNA.670-201ENST00000516255 105 ntBASIC1.74□□□□□ -2.13
ELL3Q9HB65 RNU6-567P-201ENST00000516746 107 ntBASIC1.74□□□□□ -2.13
ELL3Q9HB65 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.74□□□□□ -2.13
ELL3Q9HB65 AC007229.1-201ENST00000590455 412 ntBASIC1.74□□□□□ -2.13
ELL3Q9HB65 AC011494.1-201ENST00000596454 237 ntBASIC1.74□□□□□ -2.13
ELL3Q9HB65 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.74□□□□□ -2.13
ELL3Q9HB65 AP000654.2-201ENST00000605633 586 ntBASIC1.74□□□□□ -2.13
ELL3Q9HB65 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.74□□□□□ -2.13
ELL3Q9HB65 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.74□□□□□ -2.13
ELL3Q9HB65 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.74□□□□□ -2.13
ELL3Q9HB65 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
ELL3Q9HB65 MTND5P9-201ENST00000503854 1755 ntBASIC1.73□□□□□ -2.13
ELL3Q9HB65 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
ELL3Q9HB65 RNU1-76P-201ENST00000362903 159 ntBASIC1.73□□□□□ -2.13
ELL3Q9HB65 AC243428.1-201ENST00000421099 264 ntBASIC1.73□□□□□ -2.13
ELL3Q9HB65 DPH3P2-201ENST00000422618 250 ntBASIC1.73□□□□□ -2.13
ELL3Q9HB65 HMGB1P18-201ENST00000438801 619 ntBASIC1.73□□□□□ -2.13
ELL3Q9HB65 MTCO3P8-201ENST00000453691 755 ntBASIC1.73□□□□□ -2.13
ELL3Q9HB65 AC103851.1-201ENST00000506833 274 ntBASIC1.73□□□□□ -2.13
ELL3Q9HB65 AC116337.1-201ENST00000509680 687 ntBASIC1.73□□□□□ -2.13
ELL3Q9HB65 RNU2-44P-201ENST00000516795 194 ntBASIC1.73□□□□□ -2.13
ELL3Q9HB65 AC087441.2-201ENST00000529141 262 ntBASIC1.73□□□□□ -2.13
ELL3Q9HB65 AC026271.5-201ENST00000577873 130 ntBASIC1.73□□□□□ -2.13
ELL3Q9HB65 MIR4529-201ENST00000578110 78 ntBASIC1.73□□□□□ -2.13
ELL3Q9HB65 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.73□□□□□ -2.13
ELL3Q9HB65 AC008749.1-201ENST00000597650 306 ntBASIC1.73□□□□□ -2.13
ELL3Q9HB65 AC013412.1-201ENST00000610687 192 ntBASIC1.73□□□□□ -2.13
ELL3Q9HB65 AC022306.2-201ENST00000617563 647 ntBASIC1.73□□□□□ -2.13
ELL3Q9HB65 AC022513.1-201ENST00000624512 117 ntBASIC1.73□□□□□ -2.13
ELL3Q9HB65 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.73□□□□□ -2.13
ELL3Q9HB65 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.73□□□□□ -2.13
ELL3Q9HB65 AC009487.4-201ENST00000624969 3585 ntBASIC1.73□□□□□ -2.13
ELL3Q9HB65 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
ELL3Q9HB65 RNU6-545P-201ENST00000362681 104 ntBASIC1.72□□□□□ -2.13
ELL3Q9HB65 RNU6-1159P-201ENST00000362933 107 ntBASIC1.72□□□□□ -2.13
ELL3Q9HB65 Y_RNA.88-201ENST00000363029 99 ntBASIC1.72□□□□□ -2.13
ELL3Q9HB65 MIR32-201ENST00000384965 70 ntBASIC1.72□□□□□ -2.13
ELL3Q9HB65 RPS26P42-201ENST00000413485 326 ntBASIC1.72□□□□□ -2.13
ELL3Q9HB65 RPL21P111-201ENST00000418453 477 ntBASIC1.72□□□□□ -2.13
ELL3Q9HB65 EIF4EP2-201ENST00000422816 654 ntBASIC1.72□□□□□ -2.13
ELL3Q9HB65 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.72□□□□□ -2.13
ELL3Q9HB65 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.72□□□□□ -2.13
ELL3Q9HB65 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.72□□□□□ -2.13
ELL3Q9HB65 AC004386.2-201ENST00000441858 148 ntBASIC1.72□□□□□ -2.13
ELL3Q9HB65 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.72□□□□□ -2.13
ELL3Q9HB65 AC007215.1-201ENST00000464893 276 ntBASIC1.72□□□□□ -2.13
ELL3Q9HB65 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.72□□□□□ -2.13
ELL3Q9HB65 AC046134.1-201ENST00000514454 666 ntBASIC1.72□□□□□ -2.13
ELL3Q9HB65 ACA59.1-201ENST00000515966 143 ntBASIC1.72□□□□□ -2.13
ELL3Q9HB65 SNORA20.3-201ENST00000516880 132 ntBASIC1.72□□□□□ -2.13
ELL3Q9HB65 AP005660.1-201ENST00000522972 293 ntBASIC1.72□□□□□ -2.13
ELL3Q9HB65 CBX3P8-201ENST00000532412 525 ntBASIC1.72□□□□□ -2.13
ELL3Q9HB65 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.72□□□□□ -2.13
ELL3Q9HB65 MIR3935-201ENST00000583472 104 ntBASIC1.72□□□□□ -2.13
ELL3Q9HB65 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.72□□□□□ -2.13
ELL3Q9HB65 SNRPGP19-201ENST00000603826 189 ntBASIC1.72□□□□□ -2.13
ELL3Q9HB65 AC018462.2-201ENST00000605375 395 ntBASIC1.72□□□□□ -2.13
ELL3Q9HB65 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.72□□□□□ -2.13
ELL3Q9HB65 AL590240.4-201ENST00000616908 390 ntBASIC1.72□□□□□ -2.13
ELL3Q9HB65 AL359757.2-201ENST00000624309 274 ntBASIC1.72□□□□□ -2.13
ELL3Q9HB65 SCARNA4-201ENST00000629045 128 ntBASIC1.72□□□□□ -2.13
ELL3Q9HB65 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.71□□□□□ -2.13
ELL3Q9HB65 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.71□□□□□ -2.14
ELL3Q9HB65 RNU6-596P-201ENST00000365395 98 ntBASIC1.71□□□□□ -2.14
ELL3Q9HB65 Y_RNA.404-201ENST00000383978 102 ntBASIC1.71□□□□□ -2.14
ELL3Q9HB65 RNU11-3P-201ENST00000391111 133 ntBASIC1.71□□□□□ -2.14
ELL3Q9HB65 Y_RNA.594-201ENST00000410373 140 ntBASIC1.71□□□□□ -2.14
ELL3Q9HB65 RNU6-1304P-201ENST00000411374 106 ntBASIC1.71□□□□□ -2.14
ELL3Q9HB65 MTCO3P29-201ENST00000432119 779 ntBASIC1.71□□□□□ -2.14
ELL3Q9HB65 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.71□□□□□ -2.14
ELL3Q9HB65 AC132942.1-201ENST00000486753 483 ntBASIC1.71□□□□□ -2.14
ELL3Q9HB65 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.71□□□□□ -2.14
ELL3Q9HB65 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.71□□□□□ -2.14
ELL3Q9HB65 AC116353.2-201ENST00000505332 712 ntBASIC1.71□□□□□ -2.14
ELL3Q9HB65 RNU5F-4P-201ENST00000516581 114 ntBASIC1.71□□□□□ -2.14
ELL3Q9HB65 RNA5SP384-201ENST00000516615 116 ntBASIC1.71□□□□□ -2.14
ELL3Q9HB65 RNU6-1213P-201ENST00000517075 94 ntBASIC1.71□□□□□ -2.14
ELL3Q9HB65 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.71□□□□□ -2.14
ELL3Q9HB65 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.71□□□□□ -2.14
ELL3Q9HB65 MIR3169-201ENST00000578032 83 ntBASIC1.71□□□□□ -2.14
ELL3Q9HB65 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.71□□□□□ -2.14
ELL3Q9HB65 AC078899.2-201ENST00000595282 212 ntBASIC1.71□□□□□ -2.14
ELL3Q9HB65 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.71□□□□□ -2.14
ELL3Q9HB65 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.71□□□□□ -2.14
ELL3Q9HB65 SDR42E1P4-201ENST00000620894 481 ntBASIC1.71□□□□□ -2.14
ELL3Q9HB65 AC099654.14-201ENST00000638599 341 ntBASIC1.71□□□□□ -2.14
ELL3Q9HB65 ZNF702P-202ENST00000434269 1966 ntBASIC1.7□□□□□ -2.14
ELL3Q9HB65 Y_RNA.99-201ENST00000363138 105 ntBASIC1.7□□□□□ -2.14
ELL3Q9HB65 RNA5SP493-201ENST00000364115 91 ntBASIC1.7□□□□□ -2.14
ELL3Q9HB65 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.7□□□□□ -2.14
ELL3Q9HB65 RNU6-331P-201ENST00000384724 107 ntBASIC1.7□□□□□ -2.14
ELL3Q9HB65 RN7SKP284-201ENST00000411002 343 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 252.4 ms