Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 RPL30P12-201ENST00000474666 353 ntBASIC2.89□□□□□ -1.95
VPS16Q9H269 AC107032.1-201ENST00000485945 480 ntBASIC2.89□□□□□ -1.95
VPS16Q9H269 AC132942.1-201ENST00000486753 483 ntBASIC2.89□□□□□ -1.95
VPS16Q9H269 HMGB3P17-201ENST00000504195 649 ntBASIC2.89□□□□□ -1.95
VPS16Q9H269 AC115990.1-201ENST00000526957 301 ntBASIC2.89□□□□□ -1.95
VPS16Q9H269 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.89□□□□□ -1.95
VPS16Q9H269 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.89□□□□□ -1.95
VPS16Q9H269 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
VPS16Q9H269 MIR3200-201ENST00000580767 85 ntBASIC2.89□□□□□ -1.95
VPS16Q9H269 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
VPS16Q9H269 MIR7157-201ENST00000635801 60 ntBASIC2.89□□□□□ -1.95
VPS16Q9H269 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
VPS16Q9H269 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
VPS16Q9H269 Y_RNA.84-201ENST00000363011 104 ntBASIC2.88□□□□□ -1.95
VPS16Q9H269 snoU2_19.2-201ENST00000363024 80 ntBASIC2.88□□□□□ -1.95
VPS16Q9H269 RNU6-1203P-201ENST00000410703 110 ntBASIC2.88□□□□□ -1.95
VPS16Q9H269 RNA5SP21-201ENST00000410917 96 ntBASIC2.88□□□□□ -1.95
VPS16Q9H269 RNU2-25P-201ENST00000411041 191 ntBASIC2.88□□□□□ -1.95
VPS16Q9H269 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.88□□□□□ -1.95
VPS16Q9H269 CYCSP48-201ENST00000417124 323 ntBASIC2.88□□□□□ -1.95
VPS16Q9H269 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.88□□□□□ -1.95
VPS16Q9H269 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.88□□□□□ -1.95
VPS16Q9H269 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.88□□□□□ -1.95
VPS16Q9H269 AL442163.3-201ENST00000554110 156 ntBASIC2.88□□□□□ -1.95
VPS16Q9H269 AC104581.2-201ENST00000572227 430 ntBASIC2.88□□□□□ -1.95
VPS16Q9H269 AC136932.1-201ENST00000574771 208 ntBASIC2.88□□□□□ -1.95
VPS16Q9H269 AL356575.1-201ENST00000603008 283 ntBASIC2.88□□□□□ -1.95
VPS16Q9H269 AC073410.2-201ENST00000603240 332 ntBASIC2.88□□□□□ -1.95
VPS16Q9H269 AC010900.2-201ENST00000604508 210 ntBASIC2.88□□□□□ -1.95
VPS16Q9H269 AL137843.1-201ENST00000605078 385 ntBASIC2.88□□□□□ -1.95
VPS16Q9H269 U6.92-201ENST00000636464 89 ntBASIC2.88□□□□□ -1.95
VPS16Q9H269 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.88□□□□□ -1.95
VPS16Q9H269 SNORA20.1-201ENST00000364790 130 ntBASIC2.87□□□□□ -1.95
VPS16Q9H269 RNU1-57P-201ENST00000384491 166 ntBASIC2.87□□□□□ -1.95
VPS16Q9H269 AL603908.1-201ENST00000406098 201 ntBASIC2.87□□□□□ -1.95
VPS16Q9H269 MTCYBP2-201ENST00000407745 171 ntBASIC2.87□□□□□ -1.95
VPS16Q9H269 RNU6-1140P-201ENST00000410517 106 ntBASIC2.87□□□□□ -1.95
VPS16Q9H269 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.87□□□□□ -1.95
VPS16Q9H269 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.87□□□□□ -1.95
VPS16Q9H269 AL031659.1-201ENST00000447075 539 ntBASIC2.87□□□□□ -1.95
VPS16Q9H269 AP000705.1-201ENST00000454567 350 ntBASIC2.87□□□□□ -1.95
VPS16Q9H269 SRIP1-201ENST00000489235 288 ntBASIC2.87□□□□□ -1.95
VPS16Q9H269 RNU6-111P-201ENST00000517179 105 ntBASIC2.87□□□□□ -1.95
VPS16Q9H269 MRPS36P4-201ENST00000534436 298 ntBASIC2.87□□□□□ -1.95
VPS16Q9H269 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.87□□□□□ -1.95
VPS16Q9H269 AC103810.1-201ENST00000579873 453 ntBASIC2.87□□□□□ -1.95
VPS16Q9H269 AC010928.2-201ENST00000588017 287 ntBASIC2.87□□□□□ -1.95
VPS16Q9H269 AC243829.7-201ENST00000633081 225 ntBASIC2.87□□□□□ -1.95
VPS16Q9H269 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.87□□□□□ -1.95
VPS16Q9H269 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
VPS16Q9H269 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.86□□□□□ -1.95
VPS16Q9H269 RNU6-212P-201ENST00000362642 104 ntBASIC2.86□□□□□ -1.95
VPS16Q9H269 SNORD32A-201ENST00000364805 84 ntBASIC2.86□□□□□ -1.95
VPS16Q9H269 RNU6-1180P-201ENST00000364935 107 ntBASIC2.86□□□□□ -1.95
VPS16Q9H269 RNU6-209P-201ENST00000384118 107 ntBASIC2.86□□□□□ -1.95
VPS16Q9H269 Y_RNA.539-201ENST00000384635 107 ntBASIC2.86□□□□□ -1.95
VPS16Q9H269 MIR627-201ENST00000384979 97 ntBASIC2.86□□□□□ -1.95
VPS16Q9H269 SNORD115-46-201ENST00000390982 71 ntBASIC2.86□□□□□ -1.95
VPS16Q9H269 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.86□□□□□ -1.95
VPS16Q9H269 AL358453.1-201ENST00000422522 250 ntBASIC2.86□□□□□ -1.95
VPS16Q9H269 RPL23AP95-201ENST00000426806 265 ntBASIC2.86□□□□□ -1.95
VPS16Q9H269 SDAD1P3-201ENST00000427380 333 ntBASIC2.86□□□□□ -1.95
VPS16Q9H269 AC078809.1-201ENST00000427601 140 ntBASIC2.86□□□□□ -1.95
VPS16Q9H269 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.86□□□□□ -1.95
VPS16Q9H269 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.86□□□□□ -1.95
VPS16Q9H269 RNU7-87P-201ENST00000459343 62 ntBASIC2.86□□□□□ -1.95
VPS16Q9H269 snoU13.14-201ENST00000459372 104 ntBASIC2.86□□□□□ -1.95
VPS16Q9H269 HMGB1P35-201ENST00000503360 598 ntBASIC2.86□□□□□ -1.95
VPS16Q9H269 SCARNA3-201ENST00000517097 143 ntBASIC2.86□□□□□ -1.95
VPS16Q9H269 AP002770.2-201ENST00000543613 532 ntBASIC2.86□□□□□ -1.95
VPS16Q9H269 AC004486.1-201ENST00000546846 233 ntBASIC2.86□□□□□ -1.95
VPS16Q9H269 AL365434.2-201ENST00000607979 234 ntBASIC2.86□□□□□ -1.95
VPS16Q9H269 AL137790.1-201ENST00000634283 177 ntBASIC2.86□□□□□ -1.95
VPS16Q9H269 U6.104-201ENST00000637979 90 ntBASIC2.86□□□□□ -1.95
VPS16Q9H269 AC009541.1-201ENST00000438279 2662 ntBASIC2.86□□□□□ -1.95
VPS16Q9H269 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.85□□□□□ -1.95
VPS16Q9H269 RNU6-529P-201ENST00000363383 104 ntBASIC2.85□□□□□ -1.95
VPS16Q9H269 SNORA25.6-201ENST00000364121 118 ntBASIC2.85□□□□□ -1.95
VPS16Q9H269 RNU6-142P-201ENST00000384019 107 ntBASIC2.85□□□□□ -1.95
VPS16Q9H269 MIR186-201ENST00000384988 86 ntBASIC2.85□□□□□ -1.95
VPS16Q9H269 RN7SKP61-201ENST00000410642 295 ntBASIC2.85□□□□□ -1.95
VPS16Q9H269 RNU6-1328P-201ENST00000410938 106 ntBASIC2.85□□□□□ -1.95
VPS16Q9H269 RNU2-14P-201ENST00000411053 191 ntBASIC2.85□□□□□ -1.95
VPS16Q9H269 EIF1AXP1-201ENST00000419267 435 ntBASIC2.85□□□□□ -1.95
VPS16Q9H269 AL590135.1-201ENST00000422215 156 ntBASIC2.85□□□□□ -1.95
VPS16Q9H269 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.85□□□□□ -1.95
VPS16Q9H269 RPS15AP7-201ENST00000439294 405 ntBASIC2.85□□□□□ -1.95
VPS16Q9H269 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.85□□□□□ -1.95
VPS16Q9H269 SUMO1P2-201ENST00000452524 304 ntBASIC2.85□□□□□ -1.95
VPS16Q9H269 TOMM22P6-201ENST00000465035 409 ntBASIC2.85□□□□□ -1.95
VPS16Q9H269 SNRPGP7-201ENST00000469016 106 ntBASIC2.85□□□□□ -1.95
VPS16Q9H269 AC016632.1-201ENST00000503994 196 ntBASIC2.85□□□□□ -1.95
VPS16Q9H269 RNU6-138P-201ENST00000515952 107 ntBASIC2.85□□□□□ -1.95
VPS16Q9H269 HSPE1P4-201ENST00000550617 308 ntBASIC2.85□□□□□ -1.95
VPS16Q9H269 AC027176.1-201ENST00000560204 514 ntBASIC2.85□□□□□ -1.95
VPS16Q9H269 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.85□□□□□ -1.95
VPS16Q9H269 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
VPS16Q9H269 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
VPS16Q9H269 Z82195.2-201ENST00000612348 18351 ntBASIC2.85□□□□□ -1.95
VPS16Q9H269 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms