Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
CNTNAP4Q9C0A0 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
CNTNAP4Q9C0A0 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.8
CNTNAP4Q9C0A0 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
CNTNAP4Q9C0A0 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.83□□□□□ -1.8
CNTNAP4Q9C0A0 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CNTNAP4Q9C0A0 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.83□□□□□ -1.8
CNTNAP4Q9C0A0 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.83□□□□□ -1.8
CNTNAP4Q9C0A0 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
CNTNAP4Q9C0A0 RNU6-50P-201ENST00000362356 103 ntBASIC3.83□□□□□ -1.8
CNTNAP4Q9C0A0 RNU4-82P-201ENST00000362443 140 ntBASIC3.83□□□□□ -1.8
CNTNAP4Q9C0A0 Y_RNA.43-201ENST00000362670 111 ntBASIC3.83□□□□□ -1.8
CNTNAP4Q9C0A0 Y_RNA.272-201ENST00000364696 102 ntBASIC3.83□□□□□ -1.8
CNTNAP4Q9C0A0 RNA5SP189-201ENST00000364920 115 ntBASIC3.83□□□□□ -1.8
CNTNAP4Q9C0A0 RNU6-851P-201ENST00000384565 107 ntBASIC3.83□□□□□ -1.8
CNTNAP4Q9C0A0 RNU6-257P-201ENST00000410238 98 ntBASIC3.83□□□□□ -1.8
CNTNAP4Q9C0A0 AC012306.1-201ENST00000423267 114 ntBASIC3.83□□□□□ -1.8
CNTNAP4Q9C0A0 SCARNA20.6-201ENST00000517251 106 ntBASIC3.83□□□□□ -1.8
CNTNAP4Q9C0A0 AC115990.1-201ENST00000526957 301 ntBASIC3.83□□□□□ -1.8
CNTNAP4Q9C0A0 RPL21P9-201ENST00000556149 474 ntBASIC3.83□□□□□ -1.8
CNTNAP4Q9C0A0 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.83□□□□□ -1.8
CNTNAP4Q9C0A0 ZNF204P-201ENST00000416749 2397 ntBASIC3.83□□□□□ -1.8
CNTNAP4Q9C0A0 AC010733.2-201ENST00000589496 5702 ntBASIC3.83□□□□□ -1.8
CNTNAP4Q9C0A0 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
CNTNAP4Q9C0A0 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CNTNAP4Q9C0A0 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
CNTNAP4Q9C0A0 RNU6-884P-201ENST00000363889 107 ntBASIC3.82□□□□□ -1.8
CNTNAP4Q9C0A0 SNORA72.2-201ENST00000365028 127 ntBASIC3.82□□□□□ -1.8
CNTNAP4Q9C0A0 Y_RNA.343-201ENST00000365354 112 ntBASIC3.82□□□□□ -1.8
CNTNAP4Q9C0A0 AL138878.1-201ENST00000405131 347 ntBASIC3.82□□□□□ -1.8
CNTNAP4Q9C0A0 FTH1P15-201ENST00000406984 280 ntBASIC3.82□□□□□ -1.8
CNTNAP4Q9C0A0 MIR320B2-201ENST00000408479 138 ntBASIC3.82□□□□□ -1.8
CNTNAP4Q9C0A0 AC010095.1-201ENST00000443543 144 ntBASIC3.82□□□□□ -1.8
CNTNAP4Q9C0A0 MRPS10P1-201ENST00000448483 130 ntBASIC3.82□□□□□ -1.8
CNTNAP4Q9C0A0 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.82□□□□□ -1.8
CNTNAP4Q9C0A0 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.82□□□□□ -1.8
CNTNAP4Q9C0A0 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC3.82□□□□□ -1.8
CNTNAP4Q9C0A0 RNU5F-8P-201ENST00000515941 111 ntBASIC3.82□□□□□ -1.8
CNTNAP4Q9C0A0 RNU6-426P-201ENST00000516464 97 ntBASIC3.82□□□□□ -1.8
CNTNAP4Q9C0A0 TGIF1P1-201ENST00000558095 802 ntBASIC3.82□□□□□ -1.8
CNTNAP4Q9C0A0 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC3.82□□□□□ -1.8
CNTNAP4Q9C0A0 AC024614.2-201ENST00000577584 372 ntBASIC3.82□□□□□ -1.8
CNTNAP4Q9C0A0 AC048347.1-201ENST00000624621 427 ntBASIC3.82□□□□□ -1.8
CNTNAP4Q9C0A0 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
CNTNAP4Q9C0A0 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CNTNAP4Q9C0A0 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CNTNAP4Q9C0A0 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
CNTNAP4Q9C0A0 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.81□□□□□ -1.8
CNTNAP4Q9C0A0 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.81□□□□□ -1.8
CNTNAP4Q9C0A0 ADAM3A-203ENST00000461344 2157 ntBASIC3.81□□□□□ -1.8
CNTNAP4Q9C0A0 MIR30E-201ENST00000362104 92 ntBASIC3.81□□□□□ -1.8
CNTNAP4Q9C0A0 SNORA31-201ENST00000362607 130 ntBASIC3.81□□□□□ -1.8
CNTNAP4Q9C0A0 Y_RNA.179-201ENST00000363844 90 ntBASIC3.81□□□□□ -1.8
CNTNAP4Q9C0A0 Y_RNA.218-201ENST00000364218 104 ntBASIC3.81□□□□□ -1.8
CNTNAP4Q9C0A0 RNU6-312P-201ENST00000364629 107 ntBASIC3.81□□□□□ -1.8
CNTNAP4Q9C0A0 Y_RNA.308-201ENST00000365043 101 ntBASIC3.81□□□□□ -1.8
CNTNAP4Q9C0A0 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.81□□□□□ -1.8
CNTNAP4Q9C0A0 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC3.81□□□□□ -1.8
CNTNAP4Q9C0A0 RPL26P9-201ENST00000457466 433 ntBASIC3.81□□□□□ -1.8
CNTNAP4Q9C0A0 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC3.81□□□□□ -1.8
CNTNAP4Q9C0A0 PDCD5P2-201ENST00000507570 312 ntBASIC3.81□□□□□ -1.8
CNTNAP4Q9C0A0 AC112693.2-201ENST00000556538 232 ntBASIC3.81□□□□□ -1.8
CNTNAP4Q9C0A0 AL133393.1-201ENST00000603277 287 ntBASIC3.81□□□□□ -1.8
CNTNAP4Q9C0A0 AC005828.6-201ENST00000606610 232 ntBASIC3.81□□□□□ -1.8
CNTNAP4Q9C0A0 AL359198.2-201ENST00000611836 194 ntBASIC3.81□□□□□ -1.8
CNTNAP4Q9C0A0 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CNTNAP4Q9C0A0 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.81□□□□□ -1.8
CNTNAP4Q9C0A0 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
CNTNAP4Q9C0A0 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.81□□□□□ -1.8
CNTNAP4Q9C0A0 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CNTNAP4Q9C0A0 RNU6-1285P-201ENST00000363480 105 ntBASIC3.8□□□□□ -1.8
CNTNAP4Q9C0A0 RNU6-873P-201ENST00000363833 107 ntBASIC3.8□□□□□ -1.8
CNTNAP4Q9C0A0 RNU6-1325P-201ENST00000364905 105 ntBASIC3.8□□□□□ -1.8
CNTNAP4Q9C0A0 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.8□□□□□ -1.8
CNTNAP4Q9C0A0 Y_RNA.400-201ENST00000383963 111 ntBASIC3.8□□□□□ -1.8
CNTNAP4Q9C0A0 Y_RNA.488-201ENST00000384403 102 ntBASIC3.8□□□□□ -1.8
CNTNAP4Q9C0A0 Y_RNA.498-201ENST00000384460 102 ntBASIC3.8□□□□□ -1.8
CNTNAP4Q9C0A0 MIR3074-201ENST00000384885 81 ntBASIC3.8□□□□□ -1.8
CNTNAP4Q9C0A0 AC008267.6-201ENST00000441664 139 ntBASIC3.8□□□□□ -1.8
CNTNAP4Q9C0A0 HMGN2P10-201ENST00000448085 265 ntBASIC3.8□□□□□ -1.8
CNTNAP4Q9C0A0 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.8□□□□□ -1.8
CNTNAP4Q9C0A0 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.8□□□□□ -1.8
CNTNAP4Q9C0A0 AC005840.1-201ENST00000498412 377 ntBASIC3.8□□□□□ -1.8
CNTNAP4Q9C0A0 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC3.8□□□□□ -1.8
CNTNAP4Q9C0A0 AC068831.7-201ENST00000616954 363 ntBASIC3.8□□□□□ -1.8
CNTNAP4Q9C0A0 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.8□□□□□ -1.8
CNTNAP4Q9C0A0 AC099654.7-201ENST00000635788 2127 ntBASIC3.8□□□□□ -1.8
CNTNAP4Q9C0A0 AC135776.4-201ENST00000624300 1904 ntBASIC3.8□□□□□ -1.8
CNTNAP4Q9C0A0 MTND5P35-201ENST00000557537 1720 ntBASIC3.8□□□□□ -1.8
CNTNAP4Q9C0A0 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CNTNAP4Q9C0A0 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.79□□□□□ -1.8
CNTNAP4Q9C0A0 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC3.79□□□□□ -1.8
CNTNAP4Q9C0A0 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
CNTNAP4Q9C0A0 AC092593.1-201ENST00000515413 1815 ntBASIC3.79□□□□□ -1.8
CNTNAP4Q9C0A0 RHEBP3-201ENST00000411920 351 ntBASIC3.79□□□□□ -1.8
CNTNAP4Q9C0A0 AC063976.3-201ENST00000426849 329 ntBASIC3.79□□□□□ -1.8
CNTNAP4Q9C0A0 RPS12P18-201ENST00000442381 270 ntBASIC3.79□□□□□ -1.8
CNTNAP4Q9C0A0 RPL39P29-201ENST00000447779 157 ntBASIC3.79□□□□□ -1.8
CNTNAP4Q9C0A0 RNU6-625P-201ENST00000459412 107 ntBASIC3.79□□□□□ -1.8
CNTNAP4Q9C0A0 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms