Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC-0.38□□□□□ -2.47
SCAPERQ9BY12 AC024995.1-201ENST00000523014 93 ntBASIC-0.38□□□□□ -2.47
SCAPERQ9BY12 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC-0.38□□□□□ -2.47
SCAPERQ9BY12 AL606834.3-201ENST00000602615 496 ntBASIC-0.38□□□□□ -2.47
SCAPERQ9BY12 AL157770.1-201ENST00000623049 439 ntBASIC-0.38□□□□□ -2.47
SCAPERQ9BY12 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC-0.38□□□□□ -2.47
SCAPERQ9BY12 RNU6-1122P-201ENST00000384449 107 ntBASIC-0.39□□□□□ -2.47
SCAPERQ9BY12 MIR660-201ENST00000385235 97 ntBASIC-0.39□□□□□ -2.47
SCAPERQ9BY12 RN7SKP266-201ENST00000410232 287 ntBASIC-0.39□□□□□ -2.47
SCAPERQ9BY12 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC-0.39□□□□□ -2.47
SCAPERQ9BY12 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC-0.39□□□□□ -2.47
SCAPERQ9BY12 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC-0.39□□□□□ -2.47
SCAPERQ9BY12 UBE2D3P3-201ENST00000426992 425 ntBASIC-0.39□□□□□ -2.47
SCAPERQ9BY12 MTCO3P10-201ENST00000455912 772 ntBASIC-0.39□□□□□ -2.47
SCAPERQ9BY12 ELOCP24-201ENST00000456370 334 ntBASIC-0.39□□□□□ -2.47
SCAPERQ9BY12 SCARNA8-201ENST00000515924 131 ntBASIC-0.39□□□□□ -2.47
SCAPERQ9BY12 RNU6-320P-201ENST00000516511 106 ntBASIC-0.39□□□□□ -2.47
SCAPERQ9BY12 RNU5F-4P-201ENST00000516581 114 ntBASIC-0.39□□□□□ -2.47
SCAPERQ9BY12 AC064807.4-201ENST00000607201 407 ntBASIC-0.39□□□□□ -2.47
SCAPERQ9BY12 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC-0.39□□□□□ -2.47
SCAPERQ9BY12 MIR1295B-201ENST00000636144 60 ntBASIC-0.39□□□□□ -2.47
SCAPERQ9BY12 RNU6-1285P-201ENST00000363480 105 ntBASIC-0.4□□□□□ -2.47
SCAPERQ9BY12 RNY4P16-201ENST00000364768 94 ntBASIC-0.4□□□□□ -2.47
SCAPERQ9BY12 SNORA2.2-201ENST00000365473 135 ntBASIC-0.4□□□□□ -2.47
SCAPERQ9BY12 RNU6-744P-201ENST00000365557 107 ntBASIC-0.4□□□□□ -2.47
SCAPERQ9BY12 RNU6-1316P-201ENST00000384242 108 ntBASIC-0.4□□□□□ -2.47
SCAPERQ9BY12 MIR19A-201ENST00000384878 82 ntBASIC-0.4□□□□□ -2.47
SCAPERQ9BY12 MIR938-201ENST00000401216 83 ntBASIC-0.4□□□□□ -2.47
SCAPERQ9BY12 MTCYBP2-201ENST00000407745 171 ntBASIC-0.4□□□□□ -2.47
SCAPERQ9BY12 SNORA40.8-201ENST00000411034 126 ntBASIC-0.4□□□□□ -2.47
SCAPERQ9BY12 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC-0.4□□□□□ -2.47
SCAPERQ9BY12 AL356583.2-201ENST00000426536 280 ntBASIC-0.4□□□□□ -2.47
SCAPERQ9BY12 MTCYBP39-201ENST00000437562 491 ntBASIC-0.4□□□□□ -2.47
SCAPERQ9BY12 STAG3L5P-204ENST00000443759 179 ntBASIC-0.4□□□□□ -2.47
SCAPERQ9BY12 EEF1E1P1-201ENST00000446998 430 ntBASIC-0.4□□□□□ -2.47
SCAPERQ9BY12 PAXBP1P1-201ENST00000449315 447 ntBASIC-0.4□□□□□ -2.47
SCAPERQ9BY12 LINC01399-202ENST00000458450 244 ntBASIC-0.4□□□□□ -2.47
SCAPERQ9BY12 snoU13.11-201ENST00000459219 104 ntBASIC-0.4□□□□□ -2.47
SCAPERQ9BY12 SUMO2P5-201ENST00000506790 245 ntBASIC-0.4□□□□□ -2.47
SCAPERQ9BY12 RNU6-1096P-201ENST00000517089 102 ntBASIC-0.4□□□□□ -2.47
SCAPERQ9BY12 SLC2A13P1-201ENST00000531560 322 ntBASIC-0.4□□□□□ -2.47
SCAPERQ9BY12 UBE2Q2P8-201ENST00000560644 102 ntBASIC-0.4□□□□□ -2.47
SCAPERQ9BY12 MIR548AX-201ENST00000580117 73 ntBASIC-0.4□□□□□ -2.47
SCAPERQ9BY12 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC-0.4□□□□□ -2.47
SCAPERQ9BY12 SEPT14P17-201ENST00000617978 177 ntBASIC-0.4□□□□□ -2.47
SCAPERQ9BY12 AC015726.2-201ENST00000620112 122 ntBASIC-0.4□□□□□ -2.47
SCAPERQ9BY12 AP000943.4-201ENST00000622912 357 ntBASIC-0.4□□□□□ -2.47
SCAPERQ9BY12 AC112204.3-201ENST00000623822 332 ntBASIC-0.4□□□□□ -2.47
SCAPERQ9BY12 BX322639.1-202ENST00000423987 2213 ntBASIC-0.41□□□□□ -2.48
SCAPERQ9BY12 SNORA25.3-201ENST00000363205 127 ntBASIC-0.41□□□□□ -2.48
SCAPERQ9BY12 SNORD49B-201ENST00000365172 72 ntBASIC-0.41□□□□□ -2.48
SCAPERQ9BY12 RNA5SP128-201ENST00000365305 116 ntBASIC-0.41□□□□□ -2.48
SCAPERQ9BY12 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC-0.41□□□□□ -2.48
SCAPERQ9BY12 SNORD71-201ENST00000411292 86 ntBASIC-0.41□□□□□ -2.48
SCAPERQ9BY12 SEPT7P4-201ENST00000437076 306 ntBASIC-0.41□□□□□ -2.48
SCAPERQ9BY12 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC-0.41□□□□□ -2.48
SCAPERQ9BY12 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC-0.41□□□□□ -2.48
SCAPERQ9BY12 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC-0.41□□□□□ -2.48
SCAPERQ9BY12 AC022868.1-201ENST00000517767 391 ntBASIC-0.41□□□□□ -2.48
SCAPERQ9BY12 AC112693.2-201ENST00000556538 232 ntBASIC-0.41□□□□□ -2.48
SCAPERQ9BY12 AL138889.2-201ENST00000603883 242 ntBASIC-0.41□□□□□ -2.48
SCAPERQ9BY12 AC096720.1-201ENST00000604441 183 ntBASIC-0.41□□□□□ -2.48
SCAPERQ9BY12 AC022893.3-201ENST00000607665 437 ntBASIC-0.41□□□□□ -2.48
SCAPERQ9BY12 SNORA33-201ENST00000363664 130 ntBASIC-0.42□□□□□ -2.48
SCAPERQ9BY12 RNU6-1026P-201ENST00000384465 108 ntBASIC-0.42□□□□□ -2.48
SCAPERQ9BY12 MIR544A-201ENST00000384855 91 ntBASIC-0.42□□□□□ -2.48
SCAPERQ9BY12 MIR10A-201ENST00000385043 110 ntBASIC-0.42□□□□□ -2.48
SCAPERQ9BY12 HIGD1AP15-201ENST00000416198 280 ntBASIC-0.42□□□□□ -2.48
SCAPERQ9BY12 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC-0.42□□□□□ -2.48
SCAPERQ9BY12 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC-0.42□□□□□ -2.48
SCAPERQ9BY12 EEF1A1P39-201ENST00000440791 250 ntBASIC-0.42□□□□□ -2.48
SCAPERQ9BY12 AC243964.1-201ENST00000441814 261 ntBASIC-0.42□□□□□ -2.48
SCAPERQ9BY12 MTCO2P18-201ENST00000457151 658 ntBASIC-0.42□□□□□ -2.48
SCAPERQ9BY12 AL139824.2-201ENST00000458731 1095 ntBASIC-0.42□□□□□ -2.48
SCAPERQ9BY12 AC113347.3-201ENST00000509113 148 ntBASIC-0.42□□□□□ -2.48
SCAPERQ9BY12 Y_RNA.687-201ENST00000516558 91 ntBASIC-0.42□□□□□ -2.48
SCAPERQ9BY12 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC-0.42□□□□□ -2.48
SCAPERQ9BY12 AC122134.1-202ENST00000569111 1201 ntBASIC-0.42□□□□□ -2.48
SCAPERQ9BY12 AC004832.4-201ENST00000608952 331 ntBASIC-0.42□□□□□ -2.48
SCAPERQ9BY12 MIR8064-201ENST00000612863 90 ntBASIC-0.42□□□□□ -2.48
SCAPERQ9BY12 MIR6079-201ENST00000635807 62 ntBASIC-0.42□□□□□ -2.48
SCAPERQ9BY12 MIR18A-201ENST00000362310 71 ntBASIC-0.43□□□□□ -2.48
SCAPERQ9BY12 RNU6-674P-201ENST00000363831 107 ntBASIC-0.43□□□□□ -2.48
SCAPERQ9BY12 RNU6-48P-201ENST00000384161 107 ntBASIC-0.43□□□□□ -2.48
SCAPERQ9BY12 MT-TQ-201ENST00000387372 72 ntBASIC-0.43□□□□□ -2.48
SCAPERQ9BY12 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC-0.43□□□□□ -2.48
SCAPERQ9BY12 MTATP6P16-201ENST00000434543 526 ntBASIC-0.43□□□□□ -2.48
SCAPERQ9BY12 GXYLT1P1-201ENST00000446657 490 ntBASIC-0.43□□□□□ -2.48
SCAPERQ9BY12 AC074133.1-201ENST00000515696 183 ntBASIC-0.43□□□□□ -2.48
SCAPERQ9BY12 RNU6-917P-201ENST00000516294 104 ntBASIC-0.43□□□□□ -2.48
SCAPERQ9BY12 AF235103.2-201ENST00000525753 346 ntBASIC-0.43□□□□□ -2.48
SCAPERQ9BY12 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC-0.43□□□□□ -2.48
SCAPERQ9BY12 AC110760.3-201ENST00000598794 467 ntBASIC-0.43□□□□□ -2.48
SCAPERQ9BY12 AC234772.3-201ENST00000602277 528 ntBASIC-0.43□□□□□ -2.48
SCAPERQ9BY12 RPL17P51-201ENST00000605218 238 ntBASIC-0.43□□□□□ -2.48
SCAPERQ9BY12 AL354696.1-201ENST00000614652 497 ntBASIC-0.43□□□□□ -2.48
SCAPERQ9BY12 MIR8054-201ENST00000620877 86 ntBASIC-0.43□□□□□ -2.48
SCAPERQ9BY12 snoU2-30.2-201ENST00000362805 70 ntBASIC-0.44□□□□□ -2.48
SCAPERQ9BY12 SNORA32.3-201ENST00000384772 121 ntBASIC-0.44□□□□□ -2.48
SCAPERQ9BY12 RNU6-278P-201ENST00000390945 109 ntBASIC-0.44□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms